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< img src = "../logo.png" class = "logo" alt = "" > < h1 > Extract data from stata file for data dictionary< / h1 >
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< small class = "dont-index" > Source: < a href = "https://github.com/agdamsbo/REDCapCAST/blob/v24.11.3/R/ds2dd_detailed.R" class = "external-link" > < code > R/ds2dd_detailed.R< / code > < / a > < / small >
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< div class = "d-none name" > < code > ds2dd_detailed.Rd< / code > < / div >
< / div >
< div class = "ref-description section level2" >
< p > Extract data from stata file for data dictionary< / p >
< / div >
< div class = "section level2" >
< h2 id = "ref-usage" > Usage< a class = "anchor" aria-label = "anchor" href = "#ref-usage" > < / a > < / h2 >
< div class = "sourceCode" > < pre class = "sourceCode r" > < code > < span > < span class = "fu" > ds2dd_detailed< / span > < span class = "op" > (< / span > < / span >
< span > < span class = "va" > data< / span > ,< / span >
< span > add.auto.id < span class = "op" > =< / span > < span class = "cn" > FALSE< / span > ,< / span >
< span > date.format < span class = "op" > =< / span > < span class = "st" > "dmy"< / span > ,< / span >
< span > form.name < span class = "op" > =< / span > < span class = "cn" > NULL< / span > ,< / span >
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< span > form.sep < span class = "op" > =< / span > < span class = "cn" > NULL< / span > ,< / span >
< span > form.prefix < span class = "op" > =< / span > < span class = "cn" > TRUE< / span > ,< / span >
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< span > field.type < span class = "op" > =< / span > < span class = "cn" > NULL< / span > ,< / span >
< span > field.label < span class = "op" > =< / span > < span class = "cn" > NULL< / span > ,< / span >
< span > field.label.attr < span class = "op" > =< / span > < span class = "st" > "label"< / span > ,< / span >
< span > field.validation < span class = "op" > =< / span > < span class = "cn" > NULL< / span > ,< / span >
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< span > metadata < span class = "op" > =< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/names.html" class = "external-link" > names< / a > < / span > < span class = "op" > (< / span > < span class = "fu" > REDCapCAST< / span > < span class = "fu" > ::< / span > < span class = "va" > < a href = "redcapcast_meta.html" > redcapcast_meta< / a > < / span > < span class = "op" > )< / span > ,< / span >
< span > convert.logicals < span class = "op" > =< / span > < span class = "cn" > TRUE< / span > < / span >
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< span > < span class = "op" > )< / span > < / span > < / code > < / pre > < / div >
< / div >
< div class = "section level2" >
< h2 id = "arguments" > Arguments< a class = "anchor" aria-label = "anchor" href = "#arguments" > < / a > < / h2 >
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< dl > < dt id = "arg-data" > data< a class = "anchor" aria-label = "anchor" href = "#arg-data" > < / a > < / dt >
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< dd > < p > data frame< / p > < / dd >
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< dt id = "arg-add-auto-id" > add.auto.id< a class = "anchor" aria-label = "anchor" href = "#arg-add-auto-id" > < / a > < / dt >
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< dd > < p > flag to add id column< / p > < / dd >
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< dt id = "arg-date-format" > date.format< a class = "anchor" aria-label = "anchor" href = "#arg-date-format" > < / a > < / dt >
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< dd > < p > date format, character string. ymd/dmy/mdy. dafault is
dmy.< / p > < / dd >
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< dt id = "arg-form-name" > form.name< a class = "anchor" aria-label = "anchor" href = "#arg-form-name" > < / a > < / dt >
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< dd > < p > manually specify form name(s). Vector of length 1 or
ncol(data). Default is NULL and "data" is used.< / p > < / dd >
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< dt id = "arg-form-sep" > form.sep< a class = "anchor" aria-label = "anchor" href = "#arg-form-sep" > < / a > < / dt >
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< dd > < p > If supplied dataset has form names as suffix or prefix to the
column/variable names, the seperator can be specified. If supplied, the
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form.name is ignored. Default is NULL.< / p > < / dd >
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< dt id = "arg-form-prefix" > form.prefix< a class = "anchor" aria-label = "anchor" href = "#arg-form-prefix" > < / a > < / dt >
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< dd > < p > Flag to set if form is prefix (TRUE) or suffix (FALSE) to
the column names. Assumes all columns have pre- or suffix if specified.< / p > < / dd >
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< dt id = "arg-field-type" > field.type< a class = "anchor" aria-label = "anchor" href = "#arg-field-type" > < / a > < / dt >
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< dd > < p > manually specify field type(s). Vector of length 1 or
ncol(data). Default is NULL and "text" is used for everything but factors,
which wil get "radio".< / p > < / dd >
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< dt id = "arg-field-label" > field.label< a class = "anchor" aria-label = "anchor" href = "#arg-field-label" > < / a > < / dt >
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< dd > < p > manually specify field label(s). Vector of length 1 or
ncol(data). Default is NULL and colnames(data) is used or attribute
`field.label.attr` for haven_labelled data set (imported .dta file with
`haven::read_dta()`).< / p > < / dd >
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< dt id = "arg-field-label-attr" > field.label.attr< a class = "anchor" aria-label = "anchor" href = "#arg-field-label-attr" > < / a > < / dt >
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< dd > < p > attribute name for named labels for haven_labelled
data set (imported .dta file with `haven::read_dta()`. Default is "label"< / p > < / dd >
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< dt id = "arg-field-validation" > field.validation< a class = "anchor" aria-label = "anchor" href = "#arg-field-validation" > < / a > < / dt >
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< dd > < p > manually specify field validation(s). Vector of
length 1 or ncol(data). Default is NULL and `levels()` are used for factors
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or attribute `factor.labels.attr` for haven_labelled data set (imported .dta
file with `haven::read_dta()`).< / p > < / dd >
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< dt id = "arg-metadata" > metadata< a class = "anchor" aria-label = "anchor" href = "#arg-metadata" > < / a > < / dt >
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< dd > < p > redcap metadata headings. Default is
REDCapCAST:::metadata_names.< / p > < / dd >
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< dt id = "arg-convert-logicals" > convert.logicals< a class = "anchor" aria-label = "anchor" href = "#arg-convert-logicals" > < / a > < / dt >
< dd > < p > convert logicals to factor. Default is TRUE.< / p > < / dd >
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< / dl > < / div >
< div class = "section level2" >
< h2 id = "value" > Value< a class = "anchor" aria-label = "anchor" href = "#value" > < / a > < / h2 >
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< p > list of length 2< / p >
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< / div >
< div class = "section level2" >
< h2 id = "details" > Details< a class = "anchor" aria-label = "anchor" href = "#details" > < / a > < / h2 >
< p > This function is a natural development of the ds2dd() function. It assumes
that the first column is the ID-column. No checks.
Please, do always inspect the data dictionary before upload.< / p >
< p > Ensure, that the data set is formatted with as much information as possible.< / p >
< p > `field.type` can be supplied< / p >
< / div >
< div class = "section level2" >
< h2 id = "ref-examples" > Examples< a class = "anchor" aria-label = "anchor" href = "#ref-examples" > < / a > < / h2 >
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< div class = "sourceCode" > < pre class = "sourceCode r" > < code > < span class = "r-in" > < span > < span class = "co" > ## Basic parsing with default options< / span > < / span > < / span >
< span class = "r-in" > < span > < span class = "fu" > REDCapCAST< / span > < span class = "fu" > ::< / span > < span class = "va" > < a href = "redcapcast_data.html" > redcapcast_data< / a > < / span > < span class = "op" > |> < / span > < / span > < / span >
< span class = "r-in" > < span > < span class = "fu" > dplyr< / span > < span class = "fu" > ::< / span > < span class = "fu" > < a href = "https://dplyr.tidyverse.org/reference/select.html" class = "external-link" > select< / a > < / span > < span class = "op" > (< / span > < span class = "op" > -< / span > < span class = "fu" > dplyr< / span > < span class = "fu" > ::< / span > < span class = "fu" > < a href = "https://tidyselect.r-lib.org/reference/starts_with.html" class = "external-link" > starts_with< / a > < / span > < span class = "op" > (< / span > < span class = "st" > "redcap_"< / span > < span class = "op" > )< / span > < span class = "op" > )< / span > < span class = "op" > |> < / span > < / span > < / span >
< span class = "r-in" > < span > < span class = "fu" > ds2dd_detailed< / span > < span class = "op" > (< / span > < span class = "op" > )< / span > < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > $data< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # A tibble: 25 × < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > record_id cpr inclusion inclusion_time dob age age_integer sex < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494; font-style: italic;" > < dbl> < / span > < span style = "color: #949494; font-style: italic;" > < chr> < / span > < span style = "color: #949494; font-style: italic;" > < date> < / span > < span style = "color: #949494; font-style: italic;" > < chr> < / span > < span style = "color: #949494; font-style: italic;" > < date> < / span > < span style = "color: #949494; font-style: italic;" > < dbl> < / span > < span style = "color: #949494; font-style: italic;" > < dbl> < / span > < span style = "color: #949494; font-style: italic;" > < chr> < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 1< / span > 1 12034… 2023-03-13 12:38:49 1940-03-12 83.0 83 fema…< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 2< / span > 2 01023… 2023-03-01 10:38:57 1934-02-01 89.1 89 male < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 3< / span > 2 < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 4< / span > 2 < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 5< / span > 3 23015… 2022-03-08 12:01:07 1956-01-23 66.1 66 male < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 6< / span > 3 < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 7< / span > 3 < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 8< / span > 3 < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 9< / span > 3 < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 10< / span > 3 < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < span style = "color: #BB0000;" > NA< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # ℹ < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # ℹ < chr> , hypertension < chr> , diabetes < chr> ,< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # region < chr> , baseline_data_start_complete < chr> , mrs_assessed < chr> ,< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # mrs_date < date> , mrs_score < dbl> , mrs_complete < chr> , con_mrs < fct> ,< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # con_calc < fct> , consensus_complete < chr> , event_datetime < dttm> ,< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # event_age < dbl> , event_type < chr> , new_event_complete < chr> < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > $meta< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # A tibble: 24 × < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > field_name form_name section_header field_type field_label < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494; font-style: italic;" > < chr> < / span > < span style = "color: #949494; font-style: italic;" > < chr> < / span > < span style = "color: #949494; font-style: italic;" > < lgl> < / span > < span style = "color: #949494; font-style: italic;" > < chr> < / span > < span style = "color: #949494; font-style: italic;" > < chr> < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 1< / span > record_id data < span style = "color: #BB0000;" > NA< / span > text record_id < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 2< / span > cpr data < span style = "color: #BB0000;" > NA< / span > text cpr < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 3< / span > inclusion data < span style = "color: #BB0000;" > NA< / span > text inclusion < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 4< / span > inclusion_time data < span style = "color: #BB0000;" > NA< / span > text inclusion_time< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 5< / span > dob data < span style = "color: #BB0000;" > NA< / span > text dob < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 6< / span > age data < span style = "color: #BB0000;" > NA< / span > text age < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 7< / span > age_integer data < span style = "color: #BB0000;" > NA< / span > text age_integer < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 8< / span > sex data < span style = "color: #BB0000;" > NA< / span > text sex < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 9< / span > cohabitation data < span style = "color: #BB0000;" > NA< / span > text cohabitation < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 10< / span > hypertension data < span style = "color: #BB0000;" > NA< / span > text hypertension < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # ℹ < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # ℹ < chr> , field_note < lgl> ,< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # text_validation_type_or_show_slider_number < chr> ,< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # text_validation_min < lgl> , text_validation_max < lgl> , identifier < lgl> ,< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # branching_logic < lgl> , required_field < lgl> , custom_alignment < lgl> ,< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # question_number < lgl> , matrix_group_name < lgl> , matrix_ranking < lgl> ,< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # field_annotation < lgl> < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > attr(,"class")< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > [1] "REDCapCAST" "list" < / span >
< span class = "r-in" > < span > < / span > < / span >
< span class = "r-in" > < span > < span class = "co" > ## Adding a record_id field< / span > < / span > < / span >
2024-01-18 15:08:43 +01:00
< span class = "r-in" > < span > < span class = "va" > iris< / span > < span class = "op" > |> < / span > < span class = "fu" > ds2dd_detailed< / span > < span class = "op" > (< / span > add.auto.id < span class = "op" > =< / span > < span class = "cn" > TRUE< / span > < span class = "op" > )< / span > < / span > < / span >
2024-11-21 11:30:17 +01:00
< span class = "r-out co" > < span class = "r-pr" > #> < / span > $data< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # A tibble: 150 × < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > record_id sepal.length sepal.width petal.length petal.width species< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494; font-style: italic;" > < int> < / span > < span style = "color: #949494; font-style: italic;" > < dbl> < / span > < span style = "color: #949494; font-style: italic;" > < dbl> < / span > < span style = "color: #949494; font-style: italic;" > < dbl> < / span > < span style = "color: #949494; font-style: italic;" > < dbl> < / span > < span style = "color: #949494; font-style: italic;" > < fct> < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 1< / span > 1 5.1 3.5 1.4 0.2 setosa < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 2< / span > 2 4.9 3 1.4 0.2 setosa < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 3< / span > 3 4.7 3.2 1.3 0.2 setosa < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 4< / span > 4 4.6 3.1 1.5 0.2 setosa < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 5< / span > 5 5 3.6 1.4 0.2 setosa < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 6< / span > 6 5.4 3.9 1.7 0.4 setosa < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 7< / span > 7 4.6 3.4 1.4 0.3 setosa < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 8< / span > 8 5 3.4 1.5 0.2 setosa < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 9< / span > 9 4.4 2.9 1.4 0.2 setosa < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 10< / span > 10 4.9 3.1 1.5 0.1 setosa < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # ℹ < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > $meta< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # A tibble: 6 × < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > field_name form_name section_header field_type field_label < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494; font-style: italic;" > < chr> < / span > < span style = "color: #949494; font-style: italic;" > < chr> < / span > < span style = "color: #949494; font-style: italic;" > < lgl> < / span > < span style = "color: #949494; font-style: italic;" > < chr> < / span > < span style = "color: #949494; font-style: italic;" > < chr> < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 1< / span > record_id data < span style = "color: #BB0000;" > NA< / span > text record_id < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 2< / span > sepal.length data < span style = "color: #BB0000;" > NA< / span > text Sepal.Length< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 3< / span > sepal.width data < span style = "color: #BB0000;" > NA< / span > text Sepal.Width < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 4< / span > petal.length data < span style = "color: #BB0000;" > NA< / span > text Petal.Length< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 5< / span > petal.width data < span style = "color: #BB0000;" > NA< / span > text Petal.Width < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 6< / span > species data < span style = "color: #BB0000;" > NA< / span > radio Species < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # ℹ < chr> , field_note < lgl> ,< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # text_validation_type_or_show_slider_number < chr> ,< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # text_validation_min < lgl> , text_validation_max < lgl> , identifier < lgl> ,< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # branching_logic < lgl> , required_field < lgl> , custom_alignment < lgl> ,< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # question_number < lgl> , matrix_group_name < lgl> , matrix_ranking < lgl> ,< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # field_annotation < lgl> < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > attr(,"class")< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > [1] "REDCapCAST" "list" < / span >
< span class = "r-in" > < span > < / span > < / span >
< span class = "r-in" > < span > < span class = "co" > ## Passing form name information to function< / span > < / span > < / span >
2024-10-24 11:59:46 +02:00
< span class = "r-in" > < span > < span class = "va" > iris< / span > < span class = "op" > |> < / span > < / span > < / span >
< span class = "r-in" > < span > < span class = "fu" > ds2dd_detailed< / span > < span class = "op" > (< / span > < / span > < / span >
< span class = "r-in" > < span > add.auto.id < span class = "op" > =< / span > < span class = "cn" > TRUE< / span > ,< / span > < / span >
< span class = "r-in" > < span > form.name < span class = "op" > =< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/sample.html" class = "external-link" > sample< / a > < / span > < span class = "op" > (< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/c.html" class = "external-link" > c< / a > < / span > < span class = "op" > (< / span > < span class = "st" > "b"< / span > , < span class = "st" > "c"< / span > < span class = "op" > )< / span > , size < span class = "op" > =< / span > < span class = "fl" > 6< / span > , replace < span class = "op" > =< / span > < span class = "cn" > TRUE< / span > , prob < span class = "op" > =< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/rep.html" class = "external-link" > rep< / a > < / span > < span class = "op" > (< / span > < span class = "fl" > .5< / span > , < span class = "fl" > 2< / span > < span class = "op" > )< / span > < span class = "op" > )< / span > < / span > < / span >
< span class = "r-in" > < span > < span class = "op" > )< / span > < span class = "op" > |> < / span > < / span > < / span >
< span class = "r-in" > < span > < span class = "fu" > purrr< / span > < span class = "fu" > ::< / span > < span class = "fu" > < a href = "https://purrr.tidyverse.org/reference/pluck.html" class = "external-link" > pluck< / a > < / span > < span class = "op" > (< / span > < span class = "st" > "meta"< / span > < span class = "op" > )< / span > < / span > < / span >
2024-11-21 11:30:17 +01:00
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # A tibble: 6 × < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > field_name form_name section_header field_type field_label < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494; font-style: italic;" > < chr> < / span > < span style = "color: #949494; font-style: italic;" > < chr> < / span > < span style = "color: #949494; font-style: italic;" > < lgl> < / span > < span style = "color: #949494; font-style: italic;" > < chr> < / span > < span style = "color: #949494; font-style: italic;" > < chr> < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 1< / span > record_id b < span style = "color: #BB0000;" > NA< / span > text record_id < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 2< / span > sepal.length c < span style = "color: #BB0000;" > NA< / span > text Sepal.Length< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 3< / span > sepal.width b < span style = "color: #BB0000;" > NA< / span > text Sepal.Width < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 4< / span > petal.length c < span style = "color: #BB0000;" > NA< / span > text Petal.Length< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 5< / span > petal.width b < span style = "color: #BB0000;" > NA< / span > text Petal.Width < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 6< / span > species c < span style = "color: #BB0000;" > NA< / span > radio Species < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # ℹ < chr> , field_note < lgl> ,< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # text_validation_type_or_show_slider_number < chr> ,< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # text_validation_min < lgl> , text_validation_max < lgl> , identifier < lgl> ,< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # branching_logic < lgl> , required_field < lgl> , custom_alignment < lgl> ,< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # question_number < lgl> , matrix_group_name < lgl> , matrix_ranking < lgl> ,< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # field_annotation < lgl> < / span > < / span >
2024-01-18 15:08:43 +01:00
< span class = "r-in" > < span > < span class = "va" > mtcars< / span > < span class = "op" > |> < / span > < span class = "fu" > ds2dd_detailed< / span > < span class = "op" > (< / span > add.auto.id < span class = "op" > =< / span > < span class = "cn" > TRUE< / span > < span class = "op" > )< / span > < / span > < / span >
2024-11-21 11:30:17 +01:00
< span class = "r-out co" > < span class = "r-pr" > #> < / span > $data< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # A tibble: 32 × < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > record_id mpg cyl disp hp drat wt qsec vs am gear carb< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494; font-style: italic;" > < int> < / span > < span style = "color: #949494; font-style: italic;" > < dbl> < / span > < span style = "color: #949494; font-style: italic;" > < dbl> < / span > < span style = "color: #949494; font-style: italic;" > < dbl> < / span > < span style = "color: #949494; font-style: italic;" > < dbl> < / span > < span style = "color: #949494; font-style: italic;" > < dbl> < / span > < span style = "color: #949494; font-style: italic;" > < dbl> < / span > < span style = "color: #949494; font-style: italic;" > < dbl> < / span > < span style = "color: #949494; font-style: italic;" > < dbl> < / span > < span style = "color: #949494; font-style: italic;" > < dbl> < / span > < span style = "color: #949494; font-style: italic;" > < dbl> < / span > < span style = "color: #949494; font-style: italic;" > < dbl> < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 1< / span > 1 21 6 160 110 3.9 2.62 16.5 0 1 4 4< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 2< / span > 2 21 6 160 110 3.9 2.88 17.0 0 1 4 4< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 3< / span > 3 22.8 4 108 93 3.85 2.32 18.6 1 1 4 1< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 4< / span > 4 21.4 6 258 110 3.08 3.22 19.4 1 0 3 1< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 5< / span > 5 18.7 8 360 175 3.15 3.44 17.0 0 0 3 2< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 6< / span > 6 18.1 6 225 105 2.76 3.46 20.2 1 0 3 1< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 7< / span > 7 14.3 8 360 245 3.21 3.57 15.8 0 0 3 4< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 8< / span > 8 24.4 4 147. 62 3.69 3.19 20 1 0 4 2< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 9< / span > 9 22.8 4 141. 95 3.92 3.15 22.9 1 0 4 2< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 10< / span > 10 19.2 6 168. 123 3.92 3.44 18.3 1 0 4 4< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # ℹ < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > $meta< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # A tibble: 12 × < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > field_name form_name section_header field_type field_label< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494; font-style: italic;" > < chr> < / span > < span style = "color: #949494; font-style: italic;" > < chr> < / span > < span style = "color: #949494; font-style: italic;" > < lgl> < / span > < span style = "color: #949494; font-style: italic;" > < chr> < / span > < span style = "color: #949494; font-style: italic;" > < chr> < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 1< / span > record_id data < span style = "color: #BB0000;" > NA< / span > text record_id < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 2< / span > mpg data < span style = "color: #BB0000;" > NA< / span > text mpg < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 3< / span > cyl data < span style = "color: #BB0000;" > NA< / span > text cyl < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 4< / span > disp data < span style = "color: #BB0000;" > NA< / span > text disp < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 5< / span > hp data < span style = "color: #BB0000;" > NA< / span > text hp < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 6< / span > drat data < span style = "color: #BB0000;" > NA< / span > text drat < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 7< / span > wt data < span style = "color: #BB0000;" > NA< / span > text wt < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 8< / span > qsec data < span style = "color: #BB0000;" > NA< / span > text qsec < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 9< / span > vs data < span style = "color: #BB0000;" > NA< / span > text vs < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 10< / span > am data < span style = "color: #BB0000;" > NA< / span > text am < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 11< / span > gear data < span style = "color: #BB0000;" > NA< / span > text gear < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 12< / span > carb data < span style = "color: #BB0000;" > NA< / span > text carb < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # ℹ < lgl> , field_note < lgl> ,< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # text_validation_type_or_show_slider_number < chr> ,< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # text_validation_min < lgl> , text_validation_max < lgl> , identifier < lgl> ,< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # branching_logic < lgl> , required_field < lgl> , custom_alignment < lgl> ,< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # question_number < lgl> , matrix_group_name < lgl> , matrix_ranking < lgl> ,< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # field_annotation < lgl> < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > attr(,"class")< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > [1] "REDCapCAST" "list" < / span >
< span class = "r-in" > < span > < / span > < / span >
< span class = "r-in" > < span > < span class = "co" > ## Using column name suffix to carry form name< / span > < / span > < / span >
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< span class = "r-in" > < span > < span class = "va" > data< / span > < span class = "op" > < -< / span > < span class = "va" > iris< / span > < span class = "op" > |> < / span > < / span > < / span >
< span class = "r-in" > < span > < span class = "fu" > ds2dd_detailed< / span > < span class = "op" > (< / span > add.auto.id < span class = "op" > =< / span > < span class = "cn" > TRUE< / span > < span class = "op" > )< / span > < span class = "op" > |> < / span > < / span > < / span >
< span class = "r-in" > < span > < span class = "fu" > purrr< / span > < span class = "fu" > ::< / span > < span class = "fu" > < a href = "https://purrr.tidyverse.org/reference/pluck.html" class = "external-link" > pluck< / a > < / span > < span class = "op" > (< / span > < span class = "st" > "data"< / span > < span class = "op" > )< / span > < / span > < / span >
< span class = "r-in" > < span > < span class = "fu" > < a href = "https://rdrr.io/r/base/names.html" class = "external-link" > names< / a > < / span > < span class = "op" > (< / span > < span class = "va" > data< / span > < span class = "op" > )< / span > < span class = "op" > < -< / span > < span class = "fu" > glue< / span > < span class = "fu" > ::< / span > < span class = "fu" > < a href = "https://glue.tidyverse.org/reference/glue.html" class = "external-link" > glue< / a > < / span > < span class = "op" > (< / span > < span class = "st" > "{sample(x = c('a','b'),size = length(names(data)),< / span > < / span > < / span >
< span class = "r-in" > < span > < span class = "st" > replace=TRUE,prob = rep(x=.5,2))}__{names(data)}"< / span > < span class = "op" > )< / span > < / span > < / span >
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< span class = "r-in" > < span > < span class = "va" > data< / span > < span class = "op" > |> < / span > < span class = "fu" > ds2dd_detailed< / span > < span class = "op" > (< / span > form.sep < span class = "op" > =< / span > < span class = "st" > "__"< / span > < span class = "op" > )< / span > < / span > < / span >
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< span class = "r-out co" > < span class = "r-pr" > #> < / span > $data< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # A tibble: 150 × < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > record_id sepal.length sepal.width petal.length petal.width species< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494; font-style: italic;" > < int> < / span > < span style = "color: #949494; font-style: italic;" > < dbl> < / span > < span style = "color: #949494; font-style: italic;" > < dbl> < / span > < span style = "color: #949494; font-style: italic;" > < dbl> < / span > < span style = "color: #949494; font-style: italic;" > < dbl> < / span > < span style = "color: #949494; font-style: italic;" > < fct> < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 1< / span > 1 5.1 3.5 1.4 0.2 setosa < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 2< / span > 2 4.9 3 1.4 0.2 setosa < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 3< / span > 3 4.7 3.2 1.3 0.2 setosa < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 4< / span > 4 4.6 3.1 1.5 0.2 setosa < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 5< / span > 5 5 3.6 1.4 0.2 setosa < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 6< / span > 6 5.4 3.9 1.7 0.4 setosa < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 7< / span > 7 4.6 3.4 1.4 0.3 setosa < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 8< / span > 8 5 3.4 1.5 0.2 setosa < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 9< / span > 9 4.4 2.9 1.4 0.2 setosa < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 10< / span > 10 4.9 3.1 1.5 0.1 setosa < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # ℹ < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > $meta< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # A tibble: 6 × < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > field_name form_name section_header field_type field_label < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494; font-style: italic;" > < chr> < / span > < span style = "color: #949494; font-style: italic;" > < chr> < / span > < span style = "color: #949494; font-style: italic;" > < lgl> < / span > < span style = "color: #949494; font-style: italic;" > < chr> < / span > < span style = "color: #949494; font-style: italic;" > < chr> < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 1< / span > record_id a < span style = "color: #BB0000;" > NA< / span > text record_id < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 2< / span > sepal.length a < span style = "color: #BB0000;" > NA< / span > text sepal.length< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 3< / span > sepal.width a < span style = "color: #BB0000;" > NA< / span > text sepal.width < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 4< / span > petal.length b < span style = "color: #BB0000;" > NA< / span > text petal.length< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 5< / span > petal.width b < span style = "color: #BB0000;" > NA< / span > text petal.width < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #BCBCBC;" > 6< / span > species b < span style = "color: #BB0000;" > NA< / span > radio species < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # ℹ < chr> , field_note < lgl> ,< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # text_validation_type_or_show_slider_number < chr> ,< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # text_validation_min < lgl> , text_validation_max < lgl> , identifier < lgl> ,< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # branching_logic < lgl> , required_field < lgl> , custom_alignment < lgl> ,< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # question_number < lgl> , matrix_group_name < lgl> , matrix_ranking < lgl> ,< / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < span style = "color: #949494;" > # field_annotation < lgl> < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > attr(,"class")< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > [1] "REDCapCAST" "list" < / span >
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< / code > < / pre > < / div >
< / div >
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< / main > < aside class = "col-md-3" > < nav id = "toc" aria-label = "Table of contents" > < h2 > On this page< / h2 >
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< / nav > < / aside > < / div >
< footer > < div class = "pkgdown-footer-left" >
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< p > Developed by Andreas Gammelgaard Damsbo, Paul Egeler.< / p >
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< / div >
< div class = "pkgdown-footer-right" >
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< p > Site built with < a href = "https://pkgdown.r-lib.org/" class = "external-link" > pkgdown< / a > 2.1.1.< / p >
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< / div >
< / footer > < / div >
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< / body > < / html >
