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agdamsbo 2024-05-23 09:55:51 +00:00
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404.html
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<link href="https://agdamsbo.github.io/REDCapCAST/deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet">
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@ -31,7 +31,7 @@
<a class="navbar-brand me-2" href="https://agdamsbo.github.io/REDCapCAST/index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.4.1</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
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@ -85,13 +85,11 @@ Content not found. Please use links in the navbar.
<footer><div class="pkgdown-footer-left">
<p></p>
<p>Developed by Andreas Gammelgaard Damsbo, Paul Egeler.</p>
<p>Developed by Andreas Gammelgaard Damsbo, Paul Egeler.</p>
</div>
<div class="pkgdown-footer-right">
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<p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.8.</p>
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CODE_OF_CONDUCT.html
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@ -1,5 +1,5 @@
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<![endif]--></head><body>
@ -10,7 +10,7 @@
<a class="navbar-brand me-2" href="index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.4.1</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
@ -125,11 +125,11 @@
<footer><div class="pkgdown-footer-left">
<p></p><p>Developed by Andreas Gammelgaard Damsbo, Paul Egeler.</p>
<p>Developed by Andreas Gammelgaard Damsbo, Paul Egeler.</p>
</div>
<div class="pkgdown-footer-right">
<p></p><p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.8.</p>
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8
LICENSE.html
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@ -1,5 +1,5 @@
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@ -10,7 +10,7 @@
<a class="navbar-brand me-2" href="index.html">REDCapCAST</a>
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@ -254,11 +254,11 @@
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articles/Database-creation.html
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@ -17,7 +17,7 @@
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@ -33,7 +33,7 @@
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.4.1</small>
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@ -169,13 +169,11 @@ upload: manual or through <code>REDCapR</code>.</p>
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articles/Introduction.html
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@ -17,7 +17,7 @@
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@ -33,7 +33,7 @@
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.4.1</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
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@ -1995,13 +1995,11 @@ approach.</p>
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<p>Developed by Andreas Gammelgaard Damsbo, Paul Egeler.</p>
<p>Developed by Andreas Gammelgaard Damsbo, Paul Egeler.</p>
</div>
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.4.1</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
@ -91,7 +91,7 @@
<div class="sourceCode" id="cb1"><pre class="downlit sourceCode r">
<code class="sourceCode R"><span><span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va"><a href="https://github.com/agdamsbo/REDCapCAST" class="external-link">REDCapCAST</a></span><span class="op">)</span></span></code></pre></div>
<p>To make the easiest possible transistion from spreadsheet/dataset to
<p>To make the easiest possible transition from spreadsheet/dataset to
REDCap, I have created a small Shiny app, which adds a graphical
interface to the casting of a data dictionary and data upload. Install
the package and run the app as follows:</p>
@ -107,13 +107,11 @@ functionality, but might be extended in the future.</p>
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<p>Developed by Andreas Gammelgaard Damsbo, Paul Egeler.</p>
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@ -10,7 +10,7 @@
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.4.1</small>
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@ -53,7 +53,7 @@
<div class="section ">
<h3>All vignettes</h3>
<p class="section-desc"></p>
<div class="section-desc"></div>
<dl><dt><a href="Database-creation.html">Database-creation</a></dt>
<dd>
@ -66,11 +66,11 @@
<footer><div class="pkgdown-footer-left">
<p></p><p>Developed by Andreas Gammelgaard Damsbo, Paul Egeler.</p>
<p>Developed by Andreas Gammelgaard Damsbo, Paul Egeler.</p>
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<p></p><p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.8.</p>
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<a class="navbar-brand me-2" href="index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.4.1</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
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@ -70,13 +70,13 @@
<p>Damsbo A, Egeler P (2024).
<em>REDCapCAST: REDCap Castellated Data Handling</em>.
R package version 24.4.1, https://agdamsbo.github.io/REDCapCAST/, <a href="https://github.com/agdamsbo/REDCapCAST" class="external-link">https://github.com/agdamsbo/REDCapCAST</a>.
R package version 24.5.1, https://agdamsbo.github.io/REDCapCAST/, <a href="https://github.com/agdamsbo/REDCapCAST" class="external-link">https://github.com/agdamsbo/REDCapCAST</a>.
</p>
<pre>@Manual{,
title = {REDCapCAST: REDCap Castellated Data Handling},
author = {Andreas Gammelgaard Damsbo and Paul Egeler},
year = {2024},
note = {R package version 24.4.1, https://agdamsbo.github.io/REDCapCAST/},
note = {R package version 24.5.1, https://agdamsbo.github.io/REDCapCAST/},
url = {https://github.com/agdamsbo/REDCapCAST},
}</pre>
</div>
@ -85,11 +85,11 @@ R package version 24.4.1, https://agdamsbo.github.io/REDCapCAST/, <a href="https
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<p></p><p>Developed by Andreas Gammelgaard Damsbo, Paul Egeler.</p>
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<meta property="og:description" content="Originally forked from the R part of REDCapRITS by Paul Egeler. See &lt;https://github.com/pegeler/REDCapRITS&gt;. REDCap database casting and handling of castellated data when using repeated instruments and longitudinal projects. Keeps a focused data export approach, by allowing to only export required data from the database. REDCap (Research Electronic Data Capture) is a secure, web-based software platform designed to support data capture for research studies, providing 1) an intuitive interface for validated data capture; 2) audit trails for tracking data manipulation and export procedures; 3) automated export procedures for seamless data downloads to common statistical packages; and 4) procedures for data integration and interoperability with external sources (Harris et al (2009) &lt;doi:10.1016/j.jbi.2008.08.010&gt;; Harris et al (2019) &lt;doi:10.1016/j.jbi.2019.103208&gt;).">
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@ -33,7 +33,7 @@
<a class="navbar-brand me-2" href="index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.4.1</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
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@ -83,7 +83,8 @@
</div>
<p>REDCap database casting and handling of castellated data when using repeated instruments and longitudinal projects.</p>
<p>This package is a fork of <a href="https://github.com/pegeler/REDCapRITS" class="external-link">pegeler/REDCapRITS</a>. The REDCapRITS represents great and extensive work to handle castellated REDCap data in different programming languages. This fork is purely minded on R usage and includes a few implementations of the main <code>REDCap_split</code> function.</p>
<p>This package is very much to be seen as an attempt at a R-to-REDCap-to-R foundry for handling both the transition from dataset/variable list to database and the other way, from REDCap database to a tidy dataset. The goal was also to allow for a “minimal data” approach by allowing to filter records, instruments and variables in the export to only download data needed. I think this approach is desirable for handling sensitive, clinical data. Please refer to <a href="https://redcap-tools.github.io/" class="external-link">REDCap-Tools</a> for other great tools for working with REDCap in R.</p>
<p>I started working on this project as the castellated longitudinal data set was a little challenging. Later, I have come to learn of the <a href="https://github.com/vubiostat/redcapAPI" class="external-link"><code>redcapAPI</code></a> package, which would also cover this functionality. I find the <code>redcapAPI</code>package quite advanced and a little difficult to work with. This have led to the continued work on this package, as an easy-to-use approach for data migration, data base creation and data handling. This package is very much to be seen as an attempt at a R-to-REDCap-to-R foundry for handling both the transition from dataset/variable list to database and the other way, from REDCap database to a tidy dataset. The goal was also to allow for a “minimal data” approach by allowing to filter records, instruments and variables in the export to only download data needed. I think this approach is desirable for handling sensitive, clinical data. Please refer to <a href="https://redcap-tools.github.io/" class="external-link">REDCap-Tools</a> for other great tools for working with REDCap in R.</p>
<p>For any more advanced uses, consider using the <code>redcapAPI</code> package.</p>
<div class="section level2">
<h2 id="use-and-immprovements">Use and immprovements<a class="anchor" aria-label="anchor" href="#use-and-immprovements"></a>
</h2>
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@ -10,7 +10,7 @@
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.4.1</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
@ -53,16 +53,17 @@
</div>
<div class="section level2">
<h2 class="pkg-version" data-toc-text="24.4.1" id="redcapcast-2441---in-development">REDCapCAST 24.4.1 - in development<a class="anchor" aria-label="anchor" href="#redcapcast-2441---in-development"></a></h2>
<h2 class="pkg-version" data-toc-text="24.5.1" id="redcapcast-2451">REDCapCAST 24.5.1<a class="anchor" aria-label="anchor" href="#redcapcast-2451"></a></h2>
<div class="section level4">
<h4 id="functions-24-4-1">Functions<a class="anchor" aria-label="anchor" href="#functions-24-4-1"></a></h4>
<h4 id="functions-24-5-1">Functions<a class="anchor" aria-label="anchor" href="#functions-24-5-1"></a></h4>
<ul><li><p>Fix: <code><a href="../reference/read_redcap_tables.html">read_redcap_tables()</a></code>: field names testing allows to include “[form_name]_complete” fields.</p></li>
<li><p>Fix: <code><a href="../reference/ds2dd_detailed.html">ds2dd_detailed()</a></code>: default record ID name is now “record_id”, the REDCap default. Default is still to use the first column name. Support was added to interpret column name prefix or suffix as instrument names. See the examples.</p></li>
<li><p>New: <code><a href="../reference/create_instrument_meta.html">create_instrument_meta()</a></code>: creates zip with instrument files to allow adding new instruments to project in production. Takes data dictionary as input and creates a zip for each instrument specified by the <code>form_name</code> column.</p></li>
<li><p>New: <code><a href="../reference/doc2dd.html">doc2dd()</a></code>: function to convert document table to data dictionary. This allows to specify instrument or whole data dictionary in text document, which for most is easier to work with and easily modifiable. The generic case is a data frame with variable names as values in a column. This is a format like the REDCap data dictionary, but gives a few options for formatting. Has a few related functions for data handling and formatting. One interesting function is <code><a href="../reference/case_match_regex_list.html">case_match_regex_list()</a></code>, which allows for a dynamic <code><a href="https://dplyr.tidyverse.org/reference/case_when.html" class="external-link">dplyr::case_when()</a></code>-like approach for regex-matching. I think it is neat at least.</p></li>
</ul></div>
<div class="section level4">
<h4 id="documentation-and-more-24-4-1">Documentation and more<a class="anchor" aria-label="anchor" href="#documentation-and-more-24-4-1"></a></h4>
<ul><li>Dependencies: In order to deploy <code><a href="../reference/shiny_cast.html">shiny_cast()</a></code> with <code>shinylive</code>, I need to remove <code>curl</code> as a dependency. To accomplish this, the <code>shiny_deploy()</code> helper functions has been moved to the package <a href="https://github.com/agdamsbo/package.aid" class="external-link"><code>pacakge.aid</code></a>. This is for a rainy day: <a href="https://r-wasm.github.io/rwasm/" class="external-link uri">https://r-wasm.github.io/rwasm/</a>. The whole shiny part may be migrated to its own project to try to separate things and be easy on dependencies. Time will tell.</li>
<h4 id="documentation-and-more-24-5-1">Documentation and more<a class="anchor" aria-label="anchor" href="#documentation-and-more-24-5-1"></a></h4>
<ul><li>Dependencies: In order to deploy <code><a href="../reference/shiny_cast.html">shiny_cast()</a></code> with <code>shinylive</code>, I need to remove <code>curl</code> as a dependency. To accomplish this, the <code>shiny_deploy()</code> helper functions has been moved to the package <a href="https://github.com/agdamsbo/package.aid" class="external-link"><code>pacakge.aid</code></a>. This was before realising that <code>REDCapR</code> has <code>curl</code> as dependency, which is the culprit. <code>REDCapCAST</code> is not going to be a <code>shinylive</code> web-app without removing <code>REDCapR</code> dependency, which in the app is used for easy data upload and data dictionary deployment.</li>
</ul></div>
</div>
<div class="section level2">
@ -158,11 +159,11 @@
<footer><div class="pkgdown-footer-left">
<p></p><p>Developed by Andreas Gammelgaard Damsbo, Paul Egeler.</p>
<p>Developed by Andreas Gammelgaard Damsbo, Paul Egeler.</p>
</div>
<div class="pkgdown-footer-right">
<p></p><p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.8.</p>
<p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.9.</p>
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@ -30,10 +30,10 @@
/* Clipboard --------------------------*/
function changeTooltipMessage(element, msg) {
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element.setAttribute('data-bs-original-title', msg);
$(element).tooltip('show');
element.setAttribute('data-original-title', tooltipOriginalTitle);
element.setAttribute('data-bs-original-title', tooltipOriginalTitle);
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e.clearSelection();
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pandoc: 3.1.11
pkgdown: 2.0.8
pkgdown: 2.0.9
pkgdown_sha: ~
articles:
Database-creation: Database-creation.html
Introduction: Introduction.html
Shiny-app: Shiny-app.html
last_built: 2024-04-12T12:48Z
last_built: 2024-05-23T09:55Z
urls:
reference: https://agdamsbo.github.io/REDCapCAST/reference
article: https://agdamsbo.github.io/REDCapCAST/articles

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<img src="../logo.png" class="logo" alt=""><h1>List-base regex case_when</h1>
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/REDCapCAST/blob/HEAD/R/doc2dd.R" class="external-link"><code>R/doc2dd.R</code></a></small>
<div class="d-none name"><code>case_match_regex_list.Rd</code></div>
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<div class="ref-description section level2">
<p>Mimics case_when for list of regex patterns and values. Used for date/time
validation generation from name vector. Like case_when, the matches are in
order of priority.
Primarily used in REDCapCAST to do data type coding from systematic variable
naming.</p>
</div>
<div class="section level2">
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">case_match_regex_list</span><span class="op">(</span><span class="va">data</span>, <span class="va">match.list</span>, .default <span class="op">=</span> <span class="cn">NA</span><span class="op">)</span></span></code></pre></div>
</div>
<div class="section level2">
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
<dl><dt>data</dt>
<dd><p>vector</p></dd>
<dt>match.list</dt>
<dd><p>list of case matches</p></dd>
<dt>.default</dt>
<dd><p>Default value for non-matches. Default is NA.</p></dd>
</dl></div>
<div class="section level2">
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
<p>vector</p>
</div>
<div class="section level2">
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="fu">case_match_regex_list</span><span class="op">(</span></span></span>
<span class="r-in"><span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"test_date"</span>, <span class="st">"test_time"</span>, <span class="st">"test_tida"</span>, <span class="st">"test_tid"</span><span class="op">)</span>,</span></span>
<span class="r-in"><span> <span class="fu"><a href="https://rdrr.io/r/base/list.html" class="external-link">list</a></span><span class="op">(</span>date_dmy <span class="op">=</span> <span class="st">"_dat[eo]$"</span>, time_hh_mm_ss <span class="op">=</span> <span class="st">"_ti[md]e?$"</span><span class="op">)</span></span></span>
<span class="r-in"><span><span class="op">)</span></span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> [1] "date_dmy" "time_hh_mm_ss" NA "time_hh_mm_ss"</span>
</code></pre></div>
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<img src="../logo.png" class="logo" alt=""><h1>Simple function to generate REDCap choices from character vector</h1>
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/REDCapCAST/blob/HEAD/R/doc2dd.R" class="external-link"><code>R/doc2dd.R</code></a></small>
<div class="d-none name"><code>char2choice.Rd</code></div>
</div>
<div class="ref-description section level2">
<p>Simple function to generate REDCap choices from character vector</p>
</div>
<div class="section level2">
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">char2choice</span><span class="op">(</span><span class="va">data</span>, char.split <span class="op">=</span> <span class="st">"/"</span>, raw <span class="op">=</span> <span class="cn">NULL</span>, .default <span class="op">=</span> <span class="cn">NA</span><span class="op">)</span></span></code></pre></div>
</div>
<div class="section level2">
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
<dl><dt>data</dt>
<dd><p>vector</p></dd>
<dt>char.split</dt>
<dd><p>splitting character(s)</p></dd>
<dt>raw</dt>
<dd><p>specific values. Can be used for options of same length.</p></dd>
<dt>.default</dt>
<dd><p>default value for missing. Default is NA.</p></dd>
</dl></div>
<div class="section level2">
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
<p>vector</p>
</div>
<div class="section level2">
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="fu">char2choice</span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"yes/no"</span>,<span class="st">" yep. / nope "</span>,<span class="st">""</span>,<span class="cn">NA</span>,<span class="st">"what"</span><span class="op">)</span>,.default<span class="op">=</span><span class="cn">NA</span><span class="op">)</span></span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> [1] "1, yes | 2, no" "1, yep. | 2, nope" NA </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> [4] NA "1, what" </span>
</code></pre></div>
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<main id="main" class="col-md-9"><div class="page-header">
<img src="../logo.png" class="logo" alt=""><h1>Simple function to generate REDCap branching logic from character vector</h1>
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/REDCapCAST/blob/HEAD/R/doc2dd.R" class="external-link"><code>R/doc2dd.R</code></a></small>
<div class="d-none name"><code>char2cond.Rd</code></div>
</div>
<div class="ref-description section level2">
<p>Simple function to generate REDCap branching logic from character vector</p>
</div>
<div class="section level2">
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">char2cond</span><span class="op">(</span></span>
<span> <span class="va">data</span>,</span>
<span> minor.split <span class="op">=</span> <span class="st">","</span>,</span>
<span> major.split <span class="op">=</span> <span class="st">";"</span>,</span>
<span> major.sep <span class="op">=</span> <span class="st">" or "</span>,</span>
<span> .default <span class="op">=</span> <span class="cn">NA</span></span>
<span><span class="op">)</span></span></code></pre></div>
</div>
<div class="section level2">
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
<dl><dt>data</dt>
<dd><p>vector</p></dd>
<dt>minor.split</dt>
<dd><p>minor split</p></dd>
<dt>major.split</dt>
<dd><p>major split</p></dd>
<dt>major.sep</dt>
<dd><p>argument separation. Default is " or ".</p></dd>
<dt>.default</dt>
<dd><p>default value for missing. Default is NA.</p></dd>
</dl></div>
<div class="section level2">
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
<p>vector</p>
</div>
<div class="section level2">
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="co">#data &lt;- dd_inst$betingelse</span></span></span>
<span class="r-in"><span><span class="co">#c("Extubation_novent, 2; Pacu_delay, 1") |&gt; char2cond()</span></span></span>
<span class="r-in"></span>
</code></pre></div>
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@ -86,11 +86,11 @@ Trying to make up for different naming conventions.</p>
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<img src="../logo.png" class="logo" alt=""><h1>Create two-column HTML table for data piping in REDCap instruments</h1>
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/REDCapCAST/blob/HEAD/R/html_styling.R" class="external-link"><code>R/html_styling.R</code></a></small>
<div class="d-none name"><code>create_html_table.Rd</code></div>
</div>
<div class="ref-description section level2">
<p>Create two-column HTML table for data piping in REDCap instruments</p>
</div>
<div class="section level2">
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">create_html_table</span><span class="op">(</span><span class="va">text</span>, <span class="va">variable</span><span class="op">)</span></span></code></pre></div>
</div>
<div class="section level2">
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
<dl><dt>text</dt>
<dd><p>descriptive text</p></dd>
<dt>variable</dt>
<dd><p>variable to pipe</p></dd>
</dl></div>
<div class="section level2">
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
<p>character vector</p>
</div>
<div class="section level2">
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="fu">create_html_table</span><span class="op">(</span>text <span class="op">=</span> <span class="st">"Patient ID"</span>, variable <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"[cpr]"</span><span class="op">)</span><span class="op">)</span></span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> &lt;table style="border-collapse: collapse; width: 100%;" border="0"&gt; &lt;tbody&gt;&lt;tr&gt; &lt;td style="width: 58%;"&gt; &lt;h5&gt;&lt;span style="font-weight: normal;"&gt;Patient ID&lt;br /&gt;&lt;/span&gt;&lt;/h5&gt; &lt;/td&gt; &lt;td style="width: 42%; text-align: left;"&gt; &lt;h5&gt;&lt;span style="font-weight: bold;"&gt;[cpr]&lt;/span&gt;&lt;/h5&gt; &lt;/td&gt; &lt;/tr&gt;&lt;/tbody&gt; &lt;/table&gt;</span>
<span class="r-in"><span><span class="fu">create_html_table</span><span class="op">(</span>text <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/paste.html" class="external-link">paste</a></span><span class="op">(</span><span class="st">"assessor"</span>, <span class="fl">1</span><span class="op">:</span><span class="fl">2</span>, sep <span class="op">=</span> <span class="st">"_"</span><span class="op">)</span>, variable <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"[cpr]"</span><span class="op">)</span><span class="op">)</span></span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> &lt;table style="border-collapse: collapse; width: 100%;" border="0"&gt; &lt;tbody&gt;&lt;tr&gt; &lt;td style="width: 58%;"&gt; &lt;h5&gt;&lt;span style="font-weight: normal;"&gt;assessor_1&lt;br /&gt;&lt;/span&gt;&lt;/h5&gt; &lt;/td&gt; &lt;td style="width: 42%; text-align: left;"&gt; &lt;h5&gt;&lt;span style="font-weight: bold;"&gt;[cpr]&lt;/span&gt;&lt;/h5&gt; &lt;/td&gt; &lt;/tr&gt;&lt;tr&gt; &lt;td style="width: 58%;"&gt; &lt;h5&gt;&lt;span style="font-weight: normal;"&gt;assessor_2&lt;br /&gt;&lt;/span&gt;&lt;/h5&gt; &lt;/td&gt; &lt;td style="width: 42%; text-align: left;"&gt; &lt;h5&gt;&lt;span style="font-weight: bold;"&gt;[cpr]&lt;/span&gt;&lt;/h5&gt; &lt;/td&gt; &lt;/tr&gt;&lt;/tbody&gt; &lt;/table&gt;</span>
<span class="r-in"><span><span class="co"># create_html_table(text = c("CPR nummer","Word"), variable = c("[cpr][1]", "[cpr][2]", "[test]"))</span></span></span>
</code></pre></div>
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<main id="main" class="col-md-9"><div class="page-header">
<img src="../logo.png" class="logo" alt=""><h1>Doc table to data dictionary - EARLY, DOCS MISSING</h1>
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/REDCapCAST/blob/HEAD/R/doc2dd.R" class="external-link"><code>R/doc2dd.R</code></a></small>
<div class="d-none name"><code>doc2dd.Rd</code></div>
</div>
<div class="ref-description section level2">
<p>Works well with `project.aid::docx2list()`.
Allows defining a database in a text document (see provided template) for
an easier to use data base creation. This approach allows easier
collaboration when defining the database. The generic case is a data frame
with variable names as values in a column. This is a format like the REDCap
data dictionary, but gives a few options for formatting.</p>
</div>
<div class="section level2">
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">doc2dd</span><span class="op">(</span></span>
<span> <span class="va">data</span>,</span>
<span> <span class="va">instrument.name</span>,</span>
<span> col.variables <span class="op">=</span> <span class="fl">1</span>,</span>
<span> list.datetime.format <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/list.html" class="external-link">list</a></span><span class="op">(</span>date_dmy <span class="op">=</span> <span class="st">"_dat[eo]$"</span>, time_hh_mm_ss <span class="op">=</span> <span class="st">"_ti[md]e?$"</span><span class="op">)</span>,</span>
<span> col.description <span class="op">=</span> <span class="cn">NULL</span>,</span>
<span> col.condition <span class="op">=</span> <span class="cn">NULL</span>,</span>
<span> col.subheader <span class="op">=</span> <span class="cn">NULL</span>,</span>
<span> subheader.tag <span class="op">=</span> <span class="st">"h2"</span>,</span>
<span> condition.minor.sep <span class="op">=</span> <span class="st">","</span>,</span>
<span> condition.major.sep <span class="op">=</span> <span class="st">";"</span>,</span>
<span> col.calculation <span class="op">=</span> <span class="cn">NULL</span>,</span>
<span> col.choices <span class="op">=</span> <span class="cn">NULL</span>,</span>
<span> choices.char.sep <span class="op">=</span> <span class="st">"/"</span>,</span>
<span> missing.default <span class="op">=</span> <span class="cn">NA</span></span>
<span><span class="op">)</span></span></code></pre></div>
</div>
<div class="section level2">
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
<dl><dt>data</dt>
<dd><p>tibble or data.frame with all variable names in one column</p></dd>
<dt>instrument.name</dt>
<dd><p>character vector length one. Instrument name.</p></dd>
<dt>col.variables</dt>
<dd><p>variable names column (default = 1), allows dplyr
subsetting</p></dd>
<dt>list.datetime.format</dt>
<dd><p>formatting for date/time detection.
See `case_match_regex_list()`</p></dd>
<dt>col.description</dt>
<dd><p>descriptions column, allows dplyr
subsetting. If empty, variable names will be used.</p></dd>
<dt>col.condition</dt>
<dd><p>conditions for branching column, allows dplyr
subsetting. See `char2cond()`.</p></dd>
<dt>col.subheader</dt>
<dd><p>sub-header column, allows dplyr subsetting.
See `format_subheader()`.</p></dd>
<dt>subheader.tag</dt>
<dd><p>formatting tag. Default is "h2"</p></dd>
<dt>condition.minor.sep</dt>
<dd><p>condition split minor. See `char2cond()`.
Default is ",".</p></dd>
<dt>condition.major.sep</dt>
<dd><p>condition split major. See `char2cond()`.
Default is ";".</p></dd>
<dt>col.calculation</dt>
<dd><p>calculations column. Has to be written exact.
Character vector.</p></dd>
<dt>col.choices</dt>
<dd><p>choices column. See `char2choice()`.</p></dd>
<dt>choices.char.sep</dt>
<dd><p>choices split. See `char2choice()`. Default is "/".</p></dd>
<dt>missing.default</dt>
<dd><p>value for missing fields. Default is NA.</p></dd>
</dl></div>
<div class="section level2">
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
<p>tibble or data.frame (same as data)</p>
</div>
<div class="section level2">
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="co"># data &lt;- dd_inst</span></span></span>
<span class="r-in"><span><span class="co"># data |&gt; doc2dd(instrument.name = "evt",</span></span></span>
<span class="r-in"><span><span class="co"># col.description = 3,</span></span></span>
<span class="r-in"><span><span class="co"># col.condition = 4,</span></span></span>
<span class="r-in"><span><span class="co"># col.subheader = 2,</span></span></span>
<span class="r-in"><span><span class="co"># col.calculation = 5,</span></span></span>
<span class="r-in"><span><span class="co"># col.choices = 6)</span></span></span>
<span class="r-in"></span>
</code></pre></div>
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reference/ds2dd.html
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@ -1,6 +1,6 @@
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@ -12,7 +12,7 @@ for a more advanced function."><meta property="og:image" content="https://agdams
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@ -299,11 +299,11 @@ REDCapCAST::metadata_names.</p></dd>
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reference/ds2dd_detailed.html
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@ -10,7 +10,7 @@
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@ -419,11 +419,11 @@ Please, do always inspect the data dictionary before upload.</p>
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reference/easy_redcap.html
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.4.1</small>
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reference/file_extension.html
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.4.1</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
@ -49,7 +49,7 @@
<div class="row">
<main id="main" class="col-md-9"><div class="page-header">
<img src="../logo.png" class="logo" alt=""><h1>Helper to import files correctly</h1>
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/REDCapCAST/blob/HEAD/R/utils.r" class="external-link"><code>R/utils.r</code></a></small>
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/REDCapCAST/blob/HEAD/R/shiny_cast.R" class="external-link"><code>R/shiny_cast.R</code></a></small>
<div class="d-none name"><code>file_extension.Rd</code></div>
</div>
@ -88,11 +88,11 @@
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<p></p><p>Developed by Andreas Gammelgaard Damsbo, Paul Egeler.</p>
<p>Developed by Andreas Gammelgaard Damsbo, Paul Egeler.</p>
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<p></p><p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.8.</p>
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8
reference/focused_metadata.html
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<img src="../logo.png" class="logo" alt=""><h1>Sub-header formatting wrapper</h1>
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/REDCapCAST/blob/HEAD/R/html_styling.R" class="external-link"><code>R/html_styling.R</code></a></small>
<div class="d-none name"><code>format_subheader.Rd</code></div>
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<div class="ref-description section level2">
<p>Sub-header formatting wrapper</p>
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<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">format_subheader</span><span class="op">(</span><span class="va">data</span>, tag <span class="op">=</span> <span class="st">"h2"</span><span class="op">)</span></span></code></pre></div>
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<div class="section level2">
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
<dl><dt>data</dt>
<dd><p>character vector</p></dd>
<dt>tag</dt>
<dd><p>character vector length 1</p></dd>
</dl></div>
<div class="section level2">
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
<p>character vector</p>
</div>
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<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="st">"Instrument header"</span> <span class="op">|&gt;</span> <span class="fu">format_subheader</span><span class="op">(</span><span class="op">)</span></span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> &lt;div class="rich-text-field-label"&gt;&lt;h2&gt;Instrument header&lt;/h2&gt;&lt;/div&gt;</span>
</code></pre></div>
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8
reference/get_id_name.html
View File

@ -1,5 +1,5 @@
<!DOCTYPE html>
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.4.1</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
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<p></p><p>Developed by Andreas Gammelgaard Damsbo, Paul Egeler.</p>
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<p></p><p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.8.</p>
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8
reference/guess_time_only_filter.html
View File

@ -2,7 +2,7 @@
<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><meta name="description" content='This is just a try at guessing data type based on data class and column names
hoping for a tiny bit of naming consistency. R does not include a time-only
data format natively, so the "hms" class from `readr` is used. This
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<img src="../logo.png" class="logo" alt=""><h1>Simple html tag wrapping for REDCap text formatting</h1>
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/REDCapCAST/blob/HEAD/R/html_styling.R" class="external-link"><code>R/html_styling.R</code></a></small>
<div class="d-none name"><code>html_tag_wrap.Rd</code></div>
</div>
<div class="ref-description section level2">
<p>Simple html tag wrapping for REDCap text formatting</p>
</div>
<div class="section level2">
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">html_tag_wrap</span><span class="op">(</span><span class="va">data</span>, tag <span class="op">=</span> <span class="st">"h2"</span>, extra <span class="op">=</span> <span class="cn">NULL</span><span class="op">)</span></span></code></pre></div>
</div>
<div class="section level2">
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
<dl><dt>data</dt>
<dd><p>character vector</p></dd>
<dt>tag</dt>
<dd><p>character vector length 1</p></dd>
<dt>extra</dt>
<dd><p>character vector</p></dd>
</dl></div>
<div class="section level2">
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
<p>character vector</p>
</div>
<div class="section level2">
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="fu">html_tag_wrap</span><span class="op">(</span><span class="st">"Titel"</span>, tag <span class="op">=</span> <span class="st">"div"</span>, extra <span class="op">=</span> <span class="st">'class="rich-text-field-label"'</span><span class="op">)</span></span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> &lt;div class="rich-text-field-label"&gt;Titel&lt;/div&gt;</span>
<span class="r-in"><span><span class="fu">html_tag_wrap</span><span class="op">(</span><span class="st">"Titel"</span>, tag <span class="op">=</span> <span class="st">"h2"</span><span class="op">)</span></span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> &lt;h2&gt;Titel&lt;/h2&gt;</span>
</code></pre></div>
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@ -10,7 +10,7 @@
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.4.1</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
@ -69,11 +69,31 @@
<dd>Split REDCap repeating instruments table into multiple tables</dd>
</dl><dl><dt>
<code><a href="case_match_regex_list.html">case_match_regex_list()</a></code>
</dt>
<dd>List-base regex case_when</dd>
</dl><dl><dt>
<code><a href="char2choice.html">char2choice()</a></code>
</dt>
<dd>Simple function to generate REDCap choices from character vector</dd>
</dl><dl><dt>
<code><a href="char2cond.html">char2cond()</a></code>
</dt>
<dd>Simple function to generate REDCap branching logic from character vector</dd>
</dl><dl><dt>
<code><a href="clean_redcap_name.html">clean_redcap_name()</a></code>
</dt>
<dd>clean_redcap_name</dd>
</dl><dl><dt>
<code><a href="create_html_table.html">create_html_table()</a></code>
</dt>
<dd>Create two-column HTML table for data piping in REDCap instruments</dd>
</dl><dl><dt>
<code><a href="create_instrument_meta.html">create_instrument_meta()</a></code>
</dt>
<dd>Create zips file with necessary content based on data set</dd>
@ -84,6 +104,11 @@
<dd>Convert single digits to words</dd>
</dl><dl><dt>
<code><a href="doc2dd.html">doc2dd()</a></code>
</dt>
<dd>Doc table to data dictionary - EARLY, DOCS MISSING</dd>
</dl><dl><dt>
<code><a href="ds2dd.html">ds2dd()</a></code>
</dt>
<dd>(DEPRECATED) Data set to data dictionary function</dd>
@ -109,6 +134,11 @@
<dd>focused_metadata</dd>
</dl><dl><dt>
<code><a href="format_subheader.html">format_subheader()</a></code>
</dt>
<dd>Sub-header formatting wrapper</dd>
</dl><dl><dt>
<code><a href="get_api_key.html">get_api_key()</a></code>
</dt>
<dd>Retrieve project API key if stored, if not, set and retrieve</dd>
@ -129,6 +159,16 @@
<dd>Change "hms" to "character" for REDCap upload.</dd>
</dl><dl><dt>
<code><a href="html_tag_wrap.html">html_tag_wrap()</a></code>
</dt>
<dd>Simple html tag wrapping for REDCap text formatting</dd>
</dl><dl><dt>
<code><a href="is_missing.html">is_missing()</a></code>
</dt>
<dd>Multi missing check</dd>
</dl><dl><dt>
<code><a href="is_repeated_longitudinal.html">is_repeated_longitudinal()</a></code>
</dt>
<dd>Test if repeatable or longitudinal</dd>
@ -149,6 +189,31 @@
<dd>mtcars dataset slightly modified to use for Shiny app upload demonstration</dd>
</dl><dl><dt>
<code><a href="process_user_input.html">process_user_input()</a></code>
</dt>
<dd>User input processing</dd>
</dl><dl><dt>
<code><a href="process_user_input.character.html">process_user_input(<i>&lt;character&gt;</i>)</a></code>
</dt>
<dd>User input processing character</dd>
</dl><dl><dt>
<code><a href="process_user_input.data.frame.html">process_user_input(<i>&lt;data.frame&gt;</i>)</a></code>
</dt>
<dd>User input processing data.frame</dd>
</dl><dl><dt>
<code><a href="process_user_input.default.html">process_user_input(<i>&lt;default&gt;</i>)</a></code>
</dt>
<dd>User input processing default</dd>
</dl><dl><dt>
<code><a href="process_user_input.response.html">process_user_input(<i>&lt;response&gt;</i>)</a></code>
</dt>
<dd>User input processing response</dd>
</dl><dl><dt>
<code><a href="read_input.html">read_input()</a></code>
</dt>
<dd>Flexible file import based on extension</dd>
@ -217,11 +282,11 @@
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<img src="../logo.png" class="logo" alt=""><h1>Multi missing check</h1>
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/REDCapCAST/blob/HEAD/R/doc2dd.R" class="external-link"><code>R/doc2dd.R</code></a></small>
<div class="d-none name"><code>is_missing.Rd</code></div>
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<p>Multi missing check</p>
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<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">is_missing</span><span class="op">(</span><span class="va">data</span>, nas <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">""</span>, <span class="st">"NA"</span><span class="op">)</span><span class="op">)</span></span></code></pre></div>
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<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
<dl><dt>data</dt>
<dd><p>character vector</p></dd>
<dt>nas</dt>
<dd><p>character vector of strings considered as NA</p></dd>
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<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
<p>logical vector</p>
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reference/match_fields_to_form.html
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reference/mtcars_redcap.html
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<img src="../logo.png" class="logo" alt=""><h1>User input processing character</h1>
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/REDCapCAST/blob/HEAD/R/process_user_input.r" class="external-link"><code>R/process_user_input.r</code></a></small>
<div class="d-none name"><code>process_user_input.character.Rd</code></div>
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<div class="ref-description section level2">
<p>User input processing character</p>
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<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="co"># S3 method for character</span></span>
<span><span class="fu"><a href="process_user_input.html">process_user_input</a></span><span class="op">(</span><span class="va">x</span>, <span class="va">...</span><span class="op">)</span></span></code></pre></div>
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<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
<dl><dt>x</dt>
<dd><p>input</p></dd>
<dt>...</dt>
<dd><p>ignored</p></dd>
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<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
<p>processed input</p>
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<img src="../logo.png" class="logo" alt=""><h1>User input processing data.frame</h1>
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/REDCapCAST/blob/HEAD/R/process_user_input.r" class="external-link"><code>R/process_user_input.r</code></a></small>
<div class="d-none name"><code>process_user_input.data.frame.Rd</code></div>
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<div class="ref-description section level2">
<p>User input processing data.frame</p>
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<div class="section level2">
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="co"># S3 method for data.frame</span></span>
<span><span class="fu"><a href="process_user_input.html">process_user_input</a></span><span class="op">(</span><span class="va">x</span>, <span class="va">...</span><span class="op">)</span></span></code></pre></div>
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<div class="section level2">
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
<dl><dt>x</dt>
<dd><p>input</p></dd>
<dt>...</dt>
<dd><p>ignored</p></dd>
</dl></div>
<div class="section level2">
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
<p>processed input</p>
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<main id="main" class="col-md-9"><div class="page-header">
<img src="../logo.png" class="logo" alt=""><h1>User input processing default</h1>
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/REDCapCAST/blob/HEAD/R/process_user_input.r" class="external-link"><code>R/process_user_input.r</code></a></small>
<div class="d-none name"><code>process_user_input.default.Rd</code></div>
</div>
<div class="ref-description section level2">
<p>User input processing default</p>
</div>
<div class="section level2">
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="co"># S3 method for default</span></span>
<span><span class="fu"><a href="process_user_input.html">process_user_input</a></span><span class="op">(</span><span class="va">x</span>, <span class="va">...</span><span class="op">)</span></span></code></pre></div>
</div>
<div class="section level2">
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
<dl><dt>x</dt>
<dd><p>input</p></dd>
<dt>...</dt>
<dd><p>ignored</p></dd>
</dl></div>
<div class="section level2">
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
<p>processed input</p>
</div>
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<img src="../logo.png" class="logo" alt=""><h1>User input processing</h1>
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/REDCapCAST/blob/HEAD/R/process_user_input.r" class="external-link"><code>R/process_user_input.r</code></a></small>
<div class="d-none name"><code>process_user_input.Rd</code></div>
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<p>User input processing</p>
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<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">process_user_input</span><span class="op">(</span><span class="va">x</span><span class="op">)</span></span></code></pre></div>
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<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
<dl><dt>x</dt>
<dd><p>input</p></dd>
</dl></div>
<div class="section level2">
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
<p>processed input</p>
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<img src="../logo.png" class="logo" alt=""><h1>User input processing response</h1>
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/REDCapCAST/blob/HEAD/R/process_user_input.r" class="external-link"><code>R/process_user_input.r</code></a></small>
<div class="d-none name"><code>process_user_input.response.Rd</code></div>
</div>
<div class="ref-description section level2">
<p>User input processing response</p>
</div>
<div class="section level2">
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="co"># S3 method for response</span></span>
<span><span class="fu"><a href="process_user_input.html">process_user_input</a></span><span class="op">(</span><span class="va">x</span>, <span class="va">...</span><span class="op">)</span></span></code></pre></div>
</div>
<div class="section level2">
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
<dl><dt>x</dt>
<dd><p>input</p></dd>
<dt>...</dt>
<dd><p>ignored</p></dd>
</dl></div>
<div class="section level2">
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
<p>processed input</p>
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
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@ -110,11 +110,11 @@
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<p></p><p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.8.</p>
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@ -12,7 +12,7 @@ in keyring."><meta property="og:image" content="https://agdamsbo.github.io/REDCa
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@ -111,11 +111,11 @@ Numeric vector.</p></dd>
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8
reference/read_redcap_tables.html
View File

@ -3,7 +3,7 @@
REDCapR::redcap_read and only downloading specified fields, forms and/or
events using the built-in focused_metadata including some clean-up.
Works with classical and longitudinal projects with or without repeating
instruments."><title>Download REDCap data — read_redcap_tables • REDCapCAST</title><!-- favicons --><link rel="icon" type="image/png" sizes="16x16" href="../favicon-16x16.png"><link rel="icon" type="image/png" sizes="32x32" href="../favicon-32x32.png"><link rel="apple-touch-icon" type="image/png" sizes="180x180" href="../apple-touch-icon.png"><link rel="apple-touch-icon" type="image/png" sizes="120x120" href="../apple-touch-icon-120x120.png"><link rel="apple-touch-icon" type="image/png" sizes="76x76" href="../apple-touch-icon-76x76.png"><link rel="apple-touch-icon" type="image/png" sizes="60x60" href="../apple-touch-icon-60x60.png"><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><!-- Font Awesome icons --><link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.12.1/css/all.min.css" integrity="sha256-mmgLkCYLUQbXn0B1SRqzHar6dCnv9oZFPEC1g1cwlkk=" crossorigin="anonymous"><link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.12.1/css/v4-shims.min.css" integrity="sha256-wZjR52fzng1pJHwx4aV2AO3yyTOXrcDW7jBpJtTwVxw=" crossorigin="anonymous"><!-- bootstrap-toc --><script src="https://cdn.jsdelivr.net/gh/afeld/bootstrap-toc@v1.0.1/dist/bootstrap-toc.min.js" integrity="sha256-4veVQbu7//Lk5TSmc7YV48MxtMy98e26cf5MrgZYnwo=" crossorigin="anonymous"></script><!-- headroom.js --><script src="https://cdnjs.cloudflare.com/ajax/libs/headroom/0.11.0/headroom.min.js" integrity="sha256-AsUX4SJE1+yuDu5+mAVzJbuYNPHj/WroHuZ8Ir/CkE0=" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/headroom/0.11.0/jQuery.headroom.min.js" integrity="sha256-ZX/yNShbjqsohH1k95liqY9Gd8uOiE1S4vZc+9KQ1K4=" crossorigin="anonymous"></script><!-- clipboard.js --><script src="https://cdnjs.cloudflare.com/ajax/libs/clipboard.js/2.0.6/clipboard.min.js" integrity="sha256-inc5kl9MA1hkeYUt+EC3BhlIgyp/2jDIyBLS6k3UxPI=" crossorigin="anonymous"></script><!-- search --><script src="https://cdnjs.cloudflare.com/ajax/libs/fuse.js/6.4.6/fuse.js" integrity="sha512-zv6Ywkjyktsohkbp9bb45V6tEMoWhzFzXis+LrMehmJZZSys19Yxf1dopHx7WzIKxr5tK2dVcYmaCk2uqdjF4A==" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/autocomplete.js/0.38.0/autocomplete.jquery.min.js" integrity="sha512-GU9ayf+66Xx2TmpxqJpliWbT5PiGYxpaG8rfnBEk1LL8l1KGkRShhngwdXK1UgqhAzWpZHSiYPc09/NwDQIGyg==" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/mark.js/8.11.1/mark.min.js" integrity="sha512-5CYOlHXGh6QpOFA/TeTylKLWfB3ftPsde7AnmhuitiTX4K5SqCLBeKro6sPS8ilsz1Q4NRx3v8Ko2IBiszzdww==" crossorigin="anonymous"></script><!-- pkgdown --><script src="../pkgdown.js"></script><meta property="og:title" content="Download REDCap data — read_redcap_tables"><meta property="og:description" content="Implementation of REDCap_split with a focused data acquisition approach using
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events using the built-in focused_metadata including some clean-up.
Works with classical and longitudinal projects with or without repeating
@ -18,7 +18,7 @@ instruments."><meta property="og:image" content="https://agdamsbo.github.io/REDC
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@ -136,11 +136,11 @@ all.</p></dd>
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8
reference/redcap_wider.html
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@ -1,6 +1,6 @@
<!DOCTYPE html>
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Handles longitudinal projects, but not yet repeated instruments."><title>Redcap Wider — redcap_wider • REDCapCAST</title><!-- favicons --><link rel="icon" type="image/png" sizes="16x16" href="../favicon-16x16.png"><link rel="icon" type="image/png" sizes="32x32" href="../favicon-32x32.png"><link rel="apple-touch-icon" type="image/png" sizes="180x180" href="../apple-touch-icon.png"><link rel="apple-touch-icon" type="image/png" sizes="120x120" href="../apple-touch-icon-120x120.png"><link rel="apple-touch-icon" type="image/png" sizes="76x76" href="../apple-touch-icon-76x76.png"><link rel="apple-touch-icon" type="image/png" sizes="60x60" href="../apple-touch-icon-60x60.png"><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><!-- Font Awesome icons --><link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.12.1/css/all.min.css" integrity="sha256-mmgLkCYLUQbXn0B1SRqzHar6dCnv9oZFPEC1g1cwlkk=" crossorigin="anonymous"><link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.12.1/css/v4-shims.min.css" integrity="sha256-wZjR52fzng1pJHwx4aV2AO3yyTOXrcDW7jBpJtTwVxw=" crossorigin="anonymous"><!-- bootstrap-toc --><script src="https://cdn.jsdelivr.net/gh/afeld/bootstrap-toc@v1.0.1/dist/bootstrap-toc.min.js" integrity="sha256-4veVQbu7//Lk5TSmc7YV48MxtMy98e26cf5MrgZYnwo=" crossorigin="anonymous"></script><!-- headroom.js --><script src="https://cdnjs.cloudflare.com/ajax/libs/headroom/0.11.0/headroom.min.js" integrity="sha256-AsUX4SJE1+yuDu5+mAVzJbuYNPHj/WroHuZ8Ir/CkE0=" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/headroom/0.11.0/jQuery.headroom.min.js" integrity="sha256-ZX/yNShbjqsohH1k95liqY9Gd8uOiE1S4vZc+9KQ1K4=" crossorigin="anonymous"></script><!-- clipboard.js --><script src="https://cdnjs.cloudflare.com/ajax/libs/clipboard.js/2.0.6/clipboard.min.js" integrity="sha256-inc5kl9MA1hkeYUt+EC3BhlIgyp/2jDIyBLS6k3UxPI=" crossorigin="anonymous"></script><!-- search --><script src="https://cdnjs.cloudflare.com/ajax/libs/fuse.js/6.4.6/fuse.js" integrity="sha512-zv6Ywkjyktsohkbp9bb45V6tEMoWhzFzXis+LrMehmJZZSys19Yxf1dopHx7WzIKxr5tK2dVcYmaCk2uqdjF4A==" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/autocomplete.js/0.38.0/autocomplete.jquery.min.js" integrity="sha512-GU9ayf+66Xx2TmpxqJpliWbT5PiGYxpaG8rfnBEk1LL8l1KGkRShhngwdXK1UgqhAzWpZHSiYPc09/NwDQIGyg==" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/mark.js/8.11.1/mark.min.js" integrity="sha512-5CYOlHXGh6QpOFA/TeTylKLWfB3ftPsde7AnmhuitiTX4K5SqCLBeKro6sPS8ilsz1Q4NRx3v8Ko2IBiszzdww==" crossorigin="anonymous"></script><!-- pkgdown --><script src="../pkgdown.js"></script><meta property="og:title" content="Redcap Wider — redcap_wider"><meta property="og:description" content="Converts a list of REDCap data frames from long to wide format.
Handles longitudinal projects, but not yet repeated instruments."><title>Redcap Wider — redcap_wider • REDCapCAST</title><!-- favicons --><link rel="icon" type="image/png" sizes="16x16" href="../favicon-16x16.png"><link rel="icon" type="image/png" sizes="32x32" href="../favicon-32x32.png"><link rel="apple-touch-icon" type="image/png" sizes="180x180" href="../apple-touch-icon.png"><link rel="apple-touch-icon" type="image/png" sizes="120x120" href="../apple-touch-icon-120x120.png"><link rel="apple-touch-icon" type="image/png" sizes="76x76" href="../apple-touch-icon-76x76.png"><link rel="apple-touch-icon" type="image/png" sizes="60x60" href="../apple-touch-icon-60x60.png"><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><!-- Font Awesome icons --><link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.12.1/css/all.min.css" integrity="sha256-mmgLkCYLUQbXn0B1SRqzHar6dCnv9oZFPEC1g1cwlkk=" crossorigin="anonymous"><link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.12.1/css/v4-shims.min.css" integrity="sha256-wZjR52fzng1pJHwx4aV2AO3yyTOXrcDW7jBpJtTwVxw=" crossorigin="anonymous"><!-- bootstrap-toc --><script src="https://cdn.jsdelivr.net/gh/afeld/bootstrap-toc@v1.0.1/dist/bootstrap-toc.min.js" integrity="sha256-4veVQbu7//Lk5TSmc7YV48MxtMy98e26cf5MrgZYnwo=" crossorigin="anonymous"></script><!-- headroom.js --><script src="https://cdnjs.cloudflare.com/ajax/libs/headroom/0.11.0/headroom.min.js" integrity="sha256-AsUX4SJE1+yuDu5+mAVzJbuYNPHj/WroHuZ8Ir/CkE0=" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/headroom/0.11.0/jQuery.headroom.min.js" integrity="sha256-ZX/yNShbjqsohH1k95liqY9Gd8uOiE1S4vZc+9KQ1K4=" crossorigin="anonymous"></script><!-- clipboard.js --><script src="https://cdnjs.cloudflare.com/ajax/libs/clipboard.js/2.0.11/clipboard.min.js" integrity="sha512-7O5pXpc0oCRrxk8RUfDYFgn0nO1t+jLuIOQdOMRp4APB7uZ4vSjspzp5y6YDtDs4VzUSTbWzBFZ/LKJhnyFOKw==" crossorigin="anonymous" referrerpolicy="no-referrer"></script><!-- search --><script src="https://cdnjs.cloudflare.com/ajax/libs/fuse.js/6.4.6/fuse.js" integrity="sha512-zv6Ywkjyktsohkbp9bb45V6tEMoWhzFzXis+LrMehmJZZSys19Yxf1dopHx7WzIKxr5tK2dVcYmaCk2uqdjF4A==" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/autocomplete.js/0.38.0/autocomplete.jquery.min.js" integrity="sha512-GU9ayf+66Xx2TmpxqJpliWbT5PiGYxpaG8rfnBEk1LL8l1KGkRShhngwdXK1UgqhAzWpZHSiYPc09/NwDQIGyg==" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/mark.js/8.11.1/mark.min.js" integrity="sha512-5CYOlHXGh6QpOFA/TeTylKLWfB3ftPsde7AnmhuitiTX4K5SqCLBeKro6sPS8ilsz1Q4NRx3v8Ko2IBiszzdww==" crossorigin="anonymous"></script><!-- pkgdown --><script src="../pkgdown.js"></script><meta property="og:title" content="Redcap Wider — redcap_wider"><meta property="og:description" content="Converts a list of REDCap data frames from long to wide format.
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@ -12,7 +12,7 @@ Handles longitudinal projects, but not yet repeated instruments."><meta property
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@ -174,11 +174,11 @@ Handles longitudinal projects, but not yet repeated instruments.</p>
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reference/redcapcast_data.html
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@ -1,6 +1,6 @@
<!DOCTYPE html>
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Contains only synthetic data."><title>Data set for demonstration — redcapcast_data • REDCapCAST</title><!-- favicons --><link rel="icon" type="image/png" sizes="16x16" href="../favicon-16x16.png"><link rel="icon" type="image/png" sizes="32x32" href="../favicon-32x32.png"><link rel="apple-touch-icon" type="image/png" sizes="180x180" href="../apple-touch-icon.png"><link rel="apple-touch-icon" type="image/png" sizes="120x120" href="../apple-touch-icon-120x120.png"><link rel="apple-touch-icon" type="image/png" sizes="76x76" href="../apple-touch-icon-76x76.png"><link rel="apple-touch-icon" type="image/png" sizes="60x60" href="../apple-touch-icon-60x60.png"><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><!-- Font Awesome icons --><link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.12.1/css/all.min.css" integrity="sha256-mmgLkCYLUQbXn0B1SRqzHar6dCnv9oZFPEC1g1cwlkk=" crossorigin="anonymous"><link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.12.1/css/v4-shims.min.css" integrity="sha256-wZjR52fzng1pJHwx4aV2AO3yyTOXrcDW7jBpJtTwVxw=" crossorigin="anonymous"><!-- bootstrap-toc --><script src="https://cdn.jsdelivr.net/gh/afeld/bootstrap-toc@v1.0.1/dist/bootstrap-toc.min.js" integrity="sha256-4veVQbu7//Lk5TSmc7YV48MxtMy98e26cf5MrgZYnwo=" crossorigin="anonymous"></script><!-- headroom.js --><script src="https://cdnjs.cloudflare.com/ajax/libs/headroom/0.11.0/headroom.min.js" integrity="sha256-AsUX4SJE1+yuDu5+mAVzJbuYNPHj/WroHuZ8Ir/CkE0=" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/headroom/0.11.0/jQuery.headroom.min.js" integrity="sha256-ZX/yNShbjqsohH1k95liqY9Gd8uOiE1S4vZc+9KQ1K4=" crossorigin="anonymous"></script><!-- clipboard.js --><script src="https://cdnjs.cloudflare.com/ajax/libs/clipboard.js/2.0.6/clipboard.min.js" integrity="sha256-inc5kl9MA1hkeYUt+EC3BhlIgyp/2jDIyBLS6k3UxPI=" crossorigin="anonymous"></script><!-- search --><script src="https://cdnjs.cloudflare.com/ajax/libs/fuse.js/6.4.6/fuse.js" integrity="sha512-zv6Ywkjyktsohkbp9bb45V6tEMoWhzFzXis+LrMehmJZZSys19Yxf1dopHx7WzIKxr5tK2dVcYmaCk2uqdjF4A==" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/autocomplete.js/0.38.0/autocomplete.jquery.min.js" integrity="sha512-GU9ayf+66Xx2TmpxqJpliWbT5PiGYxpaG8rfnBEk1LL8l1KGkRShhngwdXK1UgqhAzWpZHSiYPc09/NwDQIGyg==" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/mark.js/8.11.1/mark.min.js" integrity="sha512-5CYOlHXGh6QpOFA/TeTylKLWfB3ftPsde7AnmhuitiTX4K5SqCLBeKro6sPS8ilsz1Q4NRx3v8Ko2IBiszzdww==" crossorigin="anonymous"></script><!-- pkgdown --><script src="../pkgdown.js"></script><meta property="og:title" content="Data set for demonstration — redcapcast_data"><meta property="og:description" content="This is a small dataset from a REDCap database for demonstrational purposes.
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@ -12,7 +12,7 @@ Contains only synthetic data."><meta property="og:image" content="https://agdams
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@ -148,11 +148,11 @@ Contains only synthetic data.</p>
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reference/sanitize_split.html
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reference/server_factory.html
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@ -10,7 +10,7 @@
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@ -127,11 +127,11 @@ be included in each form</p></dd>
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8
reference/strsplitx.html
View File

@ -1,6 +1,6 @@
<!DOCTYPE html>
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easing the split around the defined delimiter, see example."><title>Extended string splitting — strsplitx • REDCapCAST</title><!-- favicons --><link rel="icon" type="image/png" sizes="16x16" href="../favicon-16x16.png"><link rel="icon" type="image/png" sizes="32x32" href="../favicon-32x32.png"><link rel="apple-touch-icon" type="image/png" sizes="180x180" href="../apple-touch-icon.png"><link rel="apple-touch-icon" type="image/png" sizes="120x120" href="../apple-touch-icon-120x120.png"><link rel="apple-touch-icon" type="image/png" sizes="76x76" href="../apple-touch-icon-76x76.png"><link rel="apple-touch-icon" type="image/png" sizes="60x60" href="../apple-touch-icon-60x60.png"><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><!-- Font Awesome icons --><link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.12.1/css/all.min.css" integrity="sha256-mmgLkCYLUQbXn0B1SRqzHar6dCnv9oZFPEC1g1cwlkk=" crossorigin="anonymous"><link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.12.1/css/v4-shims.min.css" integrity="sha256-wZjR52fzng1pJHwx4aV2AO3yyTOXrcDW7jBpJtTwVxw=" crossorigin="anonymous"><!-- bootstrap-toc --><script src="https://cdn.jsdelivr.net/gh/afeld/bootstrap-toc@v1.0.1/dist/bootstrap-toc.min.js" integrity="sha256-4veVQbu7//Lk5TSmc7YV48MxtMy98e26cf5MrgZYnwo=" crossorigin="anonymous"></script><!-- headroom.js --><script src="https://cdnjs.cloudflare.com/ajax/libs/headroom/0.11.0/headroom.min.js" integrity="sha256-AsUX4SJE1+yuDu5+mAVzJbuYNPHj/WroHuZ8Ir/CkE0=" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/headroom/0.11.0/jQuery.headroom.min.js" integrity="sha256-ZX/yNShbjqsohH1k95liqY9Gd8uOiE1S4vZc+9KQ1K4=" crossorigin="anonymous"></script><!-- clipboard.js --><script src="https://cdnjs.cloudflare.com/ajax/libs/clipboard.js/2.0.6/clipboard.min.js" integrity="sha256-inc5kl9MA1hkeYUt+EC3BhlIgyp/2jDIyBLS6k3UxPI=" crossorigin="anonymous"></script><!-- search --><script src="https://cdnjs.cloudflare.com/ajax/libs/fuse.js/6.4.6/fuse.js" integrity="sha512-zv6Ywkjyktsohkbp9bb45V6tEMoWhzFzXis+LrMehmJZZSys19Yxf1dopHx7WzIKxr5tK2dVcYmaCk2uqdjF4A==" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/autocomplete.js/0.38.0/autocomplete.jquery.min.js" integrity="sha512-GU9ayf+66Xx2TmpxqJpliWbT5PiGYxpaG8rfnBEk1LL8l1KGkRShhngwdXK1UgqhAzWpZHSiYPc09/NwDQIGyg==" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/mark.js/8.11.1/mark.min.js" integrity="sha512-5CYOlHXGh6QpOFA/TeTylKLWfB3ftPsde7AnmhuitiTX4K5SqCLBeKro6sPS8ilsz1Q4NRx3v8Ko2IBiszzdww==" crossorigin="anonymous"></script><!-- pkgdown --><script src="../pkgdown.js"></script><meta property="og:title" content="Extended string splitting — strsplitx"><meta property="og:description" content="Can be used as a substitute of the base function. Main claim to fame is
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@ -12,7 +12,7 @@ easing the split around the defined delimiter, see example."><meta property="og:
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@ -118,11 +118,11 @@ easing the split around the defined delimiter, see example.</p>
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8
reference/time_only_correction.html
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@ -1,5 +1,5 @@
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<![endif]--></head><body>
@ -10,7 +10,7 @@
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.4.1</small>
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<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
@ -90,11 +90,11 @@
<footer><div class="pkgdown-footer-left">
<p></p><p>Developed by Andreas Gammelgaard Damsbo, Paul Egeler.</p>
<p>Developed by Andreas Gammelgaard Damsbo, Paul Egeler.</p>
</div>
<div class="pkgdown-footer-right">
<p></p><p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.8.</p>
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8
reference/ui_factory.html
View File

@ -1,5 +1,5 @@
<!DOCTYPE html>
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<![endif]--></head><body>
@ -10,7 +10,7 @@
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.4.1</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
@ -74,11 +74,11 @@
<footer><div class="pkgdown-footer-left">
<p></p><p>Developed by Andreas Gammelgaard Damsbo, Paul Egeler.</p>
<p>Developed by Andreas Gammelgaard Damsbo, Paul Egeler.</p>
</div>
<div class="pkgdown-footer-right">
<p></p><p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.8.</p>
<p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.9.</p>
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2
search.json
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39
sitemap.xml
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@ -33,15 +33,30 @@
<url>
<loc>https://agdamsbo.github.io/REDCapCAST/reference/REDCap_split.html</loc>
</url>
<url>
<loc>https://agdamsbo.github.io/REDCapCAST/reference/case_match_regex_list.html</loc>
</url>
<url>
<loc>https://agdamsbo.github.io/REDCapCAST/reference/char2choice.html</loc>
</url>
<url>
<loc>https://agdamsbo.github.io/REDCapCAST/reference/char2cond.html</loc>
</url>
<url>
<loc>https://agdamsbo.github.io/REDCapCAST/reference/clean_redcap_name.html</loc>
</url>
<url>
<loc>https://agdamsbo.github.io/REDCapCAST/reference/create_html_table.html</loc>
</url>
<url>
<loc>https://agdamsbo.github.io/REDCapCAST/reference/create_instrument_meta.html</loc>
</url>
<url>
<loc>https://agdamsbo.github.io/REDCapCAST/reference/d2w.html</loc>
</url>
<url>
<loc>https://agdamsbo.github.io/REDCapCAST/reference/doc2dd.html</loc>
</url>
<url>
<loc>https://agdamsbo.github.io/REDCapCAST/reference/ds2dd.html</loc>
</url>
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<url>
<loc>https://agdamsbo.github.io/REDCapCAST/reference/focused_metadata.html</loc>
</url>
<url>
<loc>https://agdamsbo.github.io/REDCapCAST/reference/format_subheader.html</loc>
</url>
<url>
<loc>https://agdamsbo.github.io/REDCapCAST/reference/get_api_key.html</loc>
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<url>
<loc>https://agdamsbo.github.io/REDCapCAST/reference/hms2character.html</loc>
</url>
<url>
<loc>https://agdamsbo.github.io/REDCapCAST/reference/html_tag_wrap.html</loc>
</url>
<url>
<loc>https://agdamsbo.github.io/REDCapCAST/reference/index.html</loc>
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<url>
<loc>https://agdamsbo.github.io/REDCapCAST/reference/is_missing.html</loc>
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<loc>https://agdamsbo.github.io/REDCapCAST/reference/is_repeated_longitudinal.html</loc>
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<loc>https://agdamsbo.github.io/REDCapCAST/reference/mtcars_redcap.html</loc>
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