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<a class="navbar-brand me-2" href="https://agdamsbo.github.io/REDCapCAST/index.html">REDCapCAST</a>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
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<a class="navbar-brand me-2" href="index.html">REDCapCAST</a>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
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<a class="navbar-brand me-2" href="index.html">REDCapCAST</a>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
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@ -89,13 +89,11 @@
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<div class="sourceCode" id="cb1"><pre class="downlit sourceCode r">
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<code class="sourceCode R"><span><span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va"><a href="https://github.com/agdamsbo/REDCapCAST" class="external-link">REDCapCAST</a></span><span class="op">)</span></span></code></pre></div>
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<p>To make the easiest possible transition from spreadsheet/dataset to
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REDCap, I have created a small Shiny app, which adds a graphical
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interface to the casting of a data dictionary and data upload. Install
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the package and run the app as follows:</p>
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<div class="sourceCode" id="cb2"><pre class="downlit sourceCode r">
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<div class="sourceCode" id="cb1"><pre class="downlit sourceCode r">
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<code class="sourceCode R"><span><span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">require</a></span><span class="op">(</span><span class="va"><a href="https://github.com/agdamsbo/REDCapCAST" class="external-link">REDCapCAST</a></span><span class="op">)</span></span>
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<span><span class="fu"><a href="../reference/shiny_cast.html">shiny_cast</a></span><span class="op">(</span><span class="op">)</span></span></code></pre></div>
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<p>The app will launch in a new window and the interface should be
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@ -10,7 +10,7 @@
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
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<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
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@ -10,7 +10,7 @@
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<a class="navbar-brand me-2" href="index.html">REDCapCAST</a>
|
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
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<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
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@ -70,13 +70,13 @@
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<p>Damsbo A, Egeler P (2024).
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<em>REDCapCAST: REDCap Castellated Data Handling</em>.
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R package version 24.5.1, https://agdamsbo.github.io/REDCapCAST/, <a href="https://github.com/agdamsbo/REDCapCAST" class="external-link">https://github.com/agdamsbo/REDCapCAST</a>.
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R package version 24.6.1, https://agdamsbo.github.io/REDCapCAST/, <a href="https://github.com/agdamsbo/REDCapCAST" class="external-link">https://github.com/agdamsbo/REDCapCAST</a>.
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</p>
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<pre>@Manual{,
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title = {REDCapCAST: REDCap Castellated Data Handling},
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author = {Andreas Gammelgaard Damsbo and Paul Egeler},
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year = {2024},
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note = {R package version 24.5.1, https://agdamsbo.github.io/REDCapCAST/},
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note = {R package version 24.6.1, https://agdamsbo.github.io/REDCapCAST/},
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url = {https://github.com/agdamsbo/REDCapCAST},
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}</pre>
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</div>
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@ -33,7 +33,7 @@
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<a class="navbar-brand me-2" href="index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
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|
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|
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<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
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<li><p><code><a href="reference/redcap_wider.html">redcap_wider()</a></code>: joins and pivots a list of data frames with repeated instruments to a wide format utilizing the <a href="https://tidyr.tidyverse.org/reference/pivot_wider.html" class="external-link"><code>tidyr::pivot_wider()</code></a> from the <a href="https://www.tidyverse.org/" class="external-link">tidyverse</a>.</p></li>
|
||||
<li><p><code><a href="reference/easy_redcap.html">easy_redcap()</a></code>: combines secure API key storage with the <code>keyring</code>-package, focused data retrieval and optional widening. This is the recommended approach for easy data access and analysis.</p></li>
|
||||
<li><p><code><a href="reference/ds2dd_detailed.html">ds2dd_detailed()</a></code>: Converts a data set to a data dictionary for upload to a new REDCap database. Variables (fields) and instruments in a REDCap data base are defined by this data dictionary.</p></li>
|
||||
<li><p><code><a href="reference/shiny_cast.html">shiny_cast()</a></code>: <a href="https://www.rstudio.com/products/shiny/" class="external-link">Shiny</a> application to ease the process of converting a spreadsheet/data set to a REDCap database. The app runs locally and data is transferred securely. You can just create and upload the data dictionary, but you can also transfer the given data in the same process. The app is <a href="https://agdamsbo.shinyapps.io/redcapcast/" class="external-link">hosted on shinyapps.io</a> while I work on a <a href="https://posit-dev.github.io/r-shinylive/" class="external-link">shinylive</a> implementation.</p></li>
|
||||
<li><p><code><a href="reference/doc2dd.html">doc2dd()</a></code>: Converts a document table to data dictionary. This allows to specify instrument or whole data dictionary in text document, which for most is easier to work with and easily modifiable. Very much like a easy version of just working directly in the data dictionary file itself.</p></li>
|
||||
<li><p><code><a href="reference/shiny_cast.html">shiny_cast()</a></code>: <a href="https://www.rstudio.com/products/shiny/" class="external-link">Shiny</a> application to ease the process of converting a spreadsheet/data set to a REDCap database. The app runs locally and data is transferred securely. You can just create and upload the data dictionary, but you can also transfer the given data in the same process. The app is <a href="https://agdamsbo.shinyapps.io/redcapcast/" class="external-link">hosted on shinyapps.io</a> <del>while I work on a <a href="https://posit-dev.github.io/r-shinylive/" class="external-link">shinylive</a> implementation</del>.</p></li>
|
||||
</ul>
|
||||
</div>
|
||||
<div class="section level2">
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||||
@ -109,7 +110,7 @@
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||||
<p>The package is available on CRAN. Install the latest version:</p>
|
||||
<pre><code><span><span class="fu"><a href="https://rdrr.io/r/utils/install.packages.html" class="external-link">install.packages</a></span><span class="op">(</span><span class="st">"REDCapCAST"</span><span class="op">)</span></span></code></pre>
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||||
<p>Install the latest version directly from GitHub:</p>
|
||||
<pre><code><span><span class="fu">remotes</span><span class="fu">::</span><span class="fu"><a href="https://remotes.r-lib.org/reference/install_github.html" class="external-link">install_github</a></span><span class="op">(</span><span class="st">"agdamsbo/REDCapCAST"</span><span class="op">)</span></span></code></pre>
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||||
<pre><code><span><span class="fu">pak</span><span class="fu">::</span><span class="fu"><a href="https://pak.r-lib.org/reference/pak.html" class="external-link">pak</a></span><span class="op">(</span><span class="st">"agdamsbo/REDCapCAST"</span><span class="op">)</span></span></code></pre>
|
||||
</div>
|
||||
<div class="section level2">
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||||
<h2 id="code-of-conduct">Code of Conduct<a class="anchor" aria-label="anchor" href="#code-of-conduct"></a>
|
||||
@ -163,6 +164,7 @@
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||||
<li><a href="https://github.com/agdamsbo/REDCapCAST" class="external-link"><img src="https://img.shields.io/github/r-package/v/agdamsbo/REDCapCAST" alt="GitHub R package version"></a></li>
|
||||
<li><a href="https://CRAN.R-project.org/package=REDCapCAST" class="external-link"><img src="https://img.shields.io/cran/v/REDCapCAST" alt="CRAN/METACRAN"></a></li>
|
||||
<li><a href="https://doi.org/10.5281/zenodo.8013984" class="external-link"><img src="https://zenodo.org/badge/DOI/10.5281/zenodo.8013984.svg" alt="DOI"></a></li>
|
||||
<li><a href="https://github.com/agdamsbo/REDCapCAST/actions/workflows/rhub.yaml" class="external-link"><img src="https://github.com/agdamsbo/REDCapCAST/actions/workflows/rhub.yaml/badge.svg" alt="R-hub"></a></li>
|
||||
<li><a href="https://github.com/agdamsbo/REDCapCAST/actions/workflows/R-CMD-check.yaml" class="external-link"><img src="https://github.com/agdamsbo/REDCapCAST/actions/workflows/R-CMD-check.yaml/badge.svg" alt="R-CMD-check"></a></li>
|
||||
<li><a href="https://github.com/agdamsbo/REDCapCAST/actions/workflows/pages/pages-build-deployment" class="external-link"><img src="https://github.com/agdamsbo/REDCapCAST/actions/workflows/pages/pages-build-deployment/badge.svg" alt="Page deployed"></a></li>
|
||||
<li><a href="https://app.codecov.io/gh/agdamsbo/REDCapCAST?branch=master" class="external-link"><img src="https://codecov.io/gh/agdamsbo/REDCapCAST/branch/master/graph/badge.svg" alt="Codecov test coverage"></a></li>
|
||||
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@ -10,7 +10,7 @@
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
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||||
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||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
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<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
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@ -53,17 +53,17 @@
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||||
</div>
|
||||
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||||
<div class="section level2">
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||||
<h2 class="pkg-version" data-toc-text="24.5.1" id="redcapcast-2451">REDCapCAST 24.5.1<a class="anchor" aria-label="anchor" href="#redcapcast-2451"></a></h2>
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||||
<h2 class="pkg-version" data-toc-text="24.6.1" id="redcapcast-2461">REDCapCAST 24.6.1<a class="anchor" aria-label="anchor" href="#redcapcast-2461"></a></h2>
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<div class="section level4">
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<h4 id="functions-24-5-1">Functions<a class="anchor" aria-label="anchor" href="#functions-24-5-1"></a></h4>
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<h4 id="functions-24-6-1">Functions<a class="anchor" aria-label="anchor" href="#functions-24-6-1"></a></h4>
|
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<ul><li><p>Fix: <code><a href="../reference/read_redcap_tables.html">read_redcap_tables()</a></code>: field names testing allows to include “[form_name]_complete” fields.</p></li>
|
||||
<li><p>Fix: <code><a href="../reference/ds2dd_detailed.html">ds2dd_detailed()</a></code>: default record ID name is now “record_id”, the REDCap default. Default is still to use the first column name. Support was added to interpret column name prefix or suffix as instrument names. See the examples.</p></li>
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||||
<li><p>New: <code><a href="../reference/create_instrument_meta.html">create_instrument_meta()</a></code>: creates zip with instrument files to allow adding new instruments to project in production. Takes data dictionary as input and creates a zip for each instrument specified by the <code>form_name</code> column.</p></li>
|
||||
<li><p>New: <code><a href="../reference/doc2dd.html">doc2dd()</a></code>: function to convert document table to data dictionary. This allows to specify instrument or whole data dictionary in text document, which for most is easier to work with and easily modifiable. The generic case is a data frame with variable names as values in a column. This is a format like the REDCap data dictionary, but gives a few options for formatting. Has a few related functions for data handling and formatting. One interesting function is <code><a href="../reference/case_match_regex_list.html">case_match_regex_list()</a></code>, which allows for a dynamic <code><a href="https://dplyr.tidyverse.org/reference/case_when.html" class="external-link">dplyr::case_when()</a></code>-like approach for regex-matching. I think it is neat at least.</p></li>
|
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</ul></div>
|
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<div class="section level4">
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<h4 id="documentation-and-more-24-5-1">Documentation and more<a class="anchor" aria-label="anchor" href="#documentation-and-more-24-5-1"></a></h4>
|
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<ul><li>Dependencies: In order to deploy <code><a href="../reference/shiny_cast.html">shiny_cast()</a></code> with <code>shinylive</code>, I need to remove <code>curl</code> as a dependency. To accomplish this, the <code>shiny_deploy()</code> helper functions has been moved to the package <a href="https://github.com/agdamsbo/package.aid" class="external-link"><code>pacakge.aid</code></a>. This was before realising that <code>REDCapR</code> has <code>curl</code> as dependency, which is the culprit. <code>REDCapCAST</code> is not going to be a <code>shinylive</code> web-app without removing <code>REDCapR</code> dependency, which in the app is used for easy data upload and data dictionary deployment.</li>
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<h4 id="documentation-and-more-24-6-1">Documentation and more<a class="anchor" aria-label="anchor" href="#documentation-and-more-24-6-1"></a></h4>
|
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<ul><li>Dependencies: In order to deploy <code><a href="../reference/shiny_cast.html">shiny_cast()</a></code> with <code>shinylive</code>, I need to remove <code>curl</code> as a dependency. To accomplish this, the <code>shiny_deploy()</code> helper functions has been moved to the package <a href="https://github.com/agdamsbo/package.aid" class="external-link"><code>pacakge.aid</code></a>. This was before realising that <code>REDCapR</code> has <code>curl</code> as dependency, which is the culprit. <code>REDCapCAST</code> is not going to be a <code>shinylive</code> web-app without removing <code>REDCapR</code> dependency or any other REDCap database interaction, which would defy the purpose. I’ll stick to hosted Shiny app instead.</li>
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</ul></div>
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</div>
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<div class="section level2">
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@ -80,7 +80,7 @@
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</ul></div>
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<div class="section level4">
|
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<h4 id="other-24-2-1">Other<a class="anchor" aria-label="anchor" href="#other-24-2-1"></a></h4>
|
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<p>I believe <code>renv</code> has now been added and runs correctly. After clone, do <code><a href="https://rstudio.github.io/renv/reference/restore.html" class="external-link">renv::restore()</a></code> to install all necessary package to modify the package. This seems to always be back and forth. <code>renv</code> may be on its way out again.</p>
|
||||
<p>I believe <code>renv</code> has now been added and runs correctly. After clone, do <code>renv::restore()</code> to install all necessary package to modify the package. This seems to always be back and forth. <code>renv</code> may be on its way out again.</p>
|
||||
<p>Added a Code of Conduct.</p>
|
||||
</div>
|
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</div>
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|
@ -5,7 +5,7 @@ articles:
|
||||
Database-creation: Database-creation.html
|
||||
Introduction: Introduction.html
|
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Shiny-app: Shiny-app.html
|
||||
last_built: 2024-05-23T09:55Z
|
||||
last_built: 2024-06-07T10:02Z
|
||||
urls:
|
||||
reference: https://agdamsbo.github.io/REDCapCAST/reference
|
||||
article: https://agdamsbo.github.io/REDCapCAST/articles
|
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|
@ -14,7 +14,7 @@ is used to determine which fields should be included in each resultant table."><
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
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||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
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<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
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@ -18,7 +18,7 @@ naming."><meta property="og:image" content="https://agdamsbo.github.io/REDCapCAS
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
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||||
|
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<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
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@ -10,7 +10,7 @@
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||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
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|
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|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
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@ -10,7 +10,7 @@
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||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -14,7 +14,7 @@ Trying to make up for different naming conventions."><meta property="og:image" c
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -14,7 +14,7 @@ used to add instrument(s) to a project in production."><meta property="og:image"
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -20,7 +20,7 @@ data dictionary, but gives a few options for formatting."><meta property="og:ima
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -12,7 +12,7 @@ for a more advanced function."><meta property="og:image" content="https://agdams
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -16,7 +16,7 @@ has to be converted to character class before REDCap upload.'><meta property="og
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
@ -244,6 +244,11 @@
|
||||
<dd>REDCap metadata from data base</dd>
|
||||
</dl><dl><dt>
|
||||
|
||||
<code><a href="replace_curly_quote.html">replace_curly_quote()</a></code>
|
||||
</dt>
|
||||
<dd>Replace curly apostrophes and quotes from word</dd>
|
||||
</dl><dl><dt>
|
||||
|
||||
<code><a href="sanitize_split.html">sanitize_split()</a></code>
|
||||
</dt>
|
||||
<dd>Sanitize list of data frames</dd>
|
||||
|
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -12,7 +12,7 @@ in keyring."><meta property="og:image" content="https://agdamsbo.github.io/REDCa
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -18,7 +18,7 @@ instruments."><meta property="og:image" content="https://agdamsbo.github.io/REDC
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -12,7 +12,7 @@ Handles longitudinal projects, but not yet repeated instruments."><meta property
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
|
@ -12,7 +12,7 @@ Contains only synthetic data."><meta property="og:image" content="https://agdams
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
|
||||
|
||||
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@ -10,7 +10,7 @@
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
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||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
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100
reference/replace_curly_quote.html
Normal file
100
reference/replace_curly_quote.html
Normal file
@ -0,0 +1,100 @@
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<!DOCTYPE html>
|
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||||
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||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
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<input type="search" class="form-control me-sm-2" aria-label="Toggle navigation" name="search-input" data-search-index="../search.json" id="search-input" placeholder="Search for" autocomplete="off"></form>
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<img src="../logo.png" class="logo" alt=""><h1>Replace curly apostrophes and quotes from word</h1>
|
||||
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/REDCapCAST/blob/HEAD/R/doc2dd.R" class="external-link"><code>R/doc2dd.R</code></a></small>
|
||||
<div class="d-none name"><code>replace_curly_quote.Rd</code></div>
|
||||
</div>
|
||||
|
||||
<div class="ref-description section level2">
|
||||
<p>Copied from textclean, which has not been updated since 2018 and is not
|
||||
on CRAN. Github:https://github.com/trinker/textclean</p>
|
||||
</div>
|
||||
|
||||
<div class="section level2">
|
||||
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
|
||||
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">replace_curly_quote</span><span class="op">(</span><span class="va">x</span><span class="op">)</span></span></code></pre></div>
|
||||
</div>
|
||||
|
||||
<div class="section level2">
|
||||
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
|
||||
<dl><dt>x</dt>
|
||||
<dd><p>character vector</p></dd>
|
||||
|
||||
</dl></div>
|
||||
<div class="section level2">
|
||||
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
|
||||
|
||||
|
||||
<p>character vector</p>
|
||||
</div>
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</main><aside class="col-md-3"><nav id="toc"><h2>On this page</h2>
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@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
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@ -10,7 +10,7 @@
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
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@ -10,7 +10,7 @@
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
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@ -10,7 +10,7 @@
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
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@ -12,7 +12,7 @@ easing the split around the defined delimiter, see example."><meta property="og:
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
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<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
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@ -10,7 +10,7 @@
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|
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
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<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
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@ -10,7 +10,7 @@
|
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.5.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.6.1</small>
|
||||
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@ -141,6 +141,9 @@
|
||||
<url>
|
||||
<loc>https://agdamsbo.github.io/REDCapCAST/reference/redcapcast_meta.html</loc>
|
||||
</url>
|
||||
<url>
|
||||
<loc>https://agdamsbo.github.io/REDCapCAST/reference/replace_curly_quote.html</loc>
|
||||
</url>
|
||||
<url>
|
||||
<loc>https://agdamsbo.github.io/REDCapCAST/reference/sanitize_split.html</loc>
|
||||
</url>
|
||||
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Reference in New Issue
Block a user