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<a class="navbar-brand me-2" href="https://agdamsbo.github.io/REDCapCAST/index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.11.1</small>
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<a class="navbar-brand me-2" href="index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.11.1</small>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.11.1</small>
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.11.1</small>
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.11.1</small>
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.11.1</small>
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.11.1</small>
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<a class="navbar-brand me-2" href="index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.11.1</small>
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<p><small class="dont-index">Source: <a href="https://github.com/agdamsbo/REDCapCAST/blob/main/DESCRIPTION" class="external-link"><code>DESCRIPTION</code></a></small></p>
<p>Damsbo A, Egeler P (2024).
<em>REDCapCAST: REDCap Castellated Data Handling</em>.
R package version 24.10.3, https://agdamsbo.github.io/REDCapCAST/, <a href="https://github.com/agdamsbo/REDCapCAST" class="external-link">https://github.com/agdamsbo/REDCapCAST</a>.
<em>REDCapCAST: REDCap Castellated Data Handling And Metadata Casting</em>.
R package version 24.11.1, https://agdamsbo.github.io/REDCapCAST/, <a href="https://github.com/agdamsbo/REDCapCAST" class="external-link">https://github.com/agdamsbo/REDCapCAST</a>.
</p>
<pre>@Manual{,
title = {REDCapCAST: REDCap Castellated Data Handling},
title = {REDCapCAST: REDCap Castellated Data Handling And Metadata Casting},
author = {Andreas Gammelgaard Damsbo and Paul Egeler},
year = {2024},
note = {R package version 24.10.3, https://agdamsbo.github.io/REDCapCAST/},
note = {R package version 24.11.1, https://agdamsbo.github.io/REDCapCAST/},
url = {https://github.com/agdamsbo/REDCapCAST},
}</pre>
</div>

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<meta charset="utf-8">
<meta http-equiv="X-UA-Compatible" content="IE=edge">
<meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no">
<title>REDCap Castellated Data Handling • REDCapCAST</title>
<title>REDCap Castellated Data Handling And Metadata Casting • REDCapCAST</title>
<!-- favicons --><link rel="icon" type="image/png" sizes="16x16" href="favicon-16x16.png">
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@ -16,9 +16,9 @@
<link href="deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet">
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<meta name="description" content="Originally forked from the R part of REDCapRITS by Paul Egeler. See &lt;https://github.com/pegeler/REDCapRITS&gt;. REDCap database casting and handling of castellated data when using repeated instruments and longitudinal projects. Keeps a focused data export approach, by allowing to only export required data from the database. REDCap (Research Electronic Data Capture) is a secure, web-based software platform designed to support data capture for research studies, providing 1) an intuitive interface for validated data capture; 2) audit trails for tracking data manipulation and export procedures; 3) automated export procedures for seamless data downloads to common statistical packages; and 4) procedures for data integration and interoperability with external sources (Harris et al (2009) &lt;doi:10.1016/j.jbi.2008.08.010&gt;; Harris et al (2019) &lt;doi:10.1016/j.jbi.2019.103208&gt;).">
<meta property="og:description" content="Originally forked from the R part of REDCapRITS by Paul Egeler. See &lt;https://github.com/pegeler/REDCapRITS&gt;. REDCap database casting and handling of castellated data when using repeated instruments and longitudinal projects. Keeps a focused data export approach, by allowing to only export required data from the database. REDCap (Research Electronic Data Capture) is a secure, web-based software platform designed to support data capture for research studies, providing 1) an intuitive interface for validated data capture; 2) audit trails for tracking data manipulation and export procedures; 3) automated export procedures for seamless data downloads to common statistical packages; and 4) procedures for data integration and interoperability with external sources (Harris et al (2009) &lt;doi:10.1016/j.jbi.2008.08.010&gt;; Harris et al (2019) &lt;doi:10.1016/j.jbi.2019.103208&gt;).">
<script src="deps/headroom-0.11.0/headroom.min.js"></script><script src="deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="deps/search-1.0.0/fuse.min.js"></script><script src="deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="pkgdown.js"></script><meta property="og:title" content="REDCap Castellated Data Handling And Metadata Casting">
<meta name="description" content="Originally forked from the R part of REDCapRITS by Paul Egeler. See &lt;https://github.com/pegeler/REDCapRITS&gt;. REDCap database casting and handling of castellated data when using repeated instruments and longitudinal projects. Keeps a focused data export approach, by allowing to only export required data from the database. Also for casting new REDCap databases based on datasets from other sources. REDCap (Research Electronic Data Capture) is a secure, web-based software platform designed to support data capture for research studies, providing 1) an intuitive interface for validated data capture; 2) audit trails for tracking data manipulation and export procedures; 3) automated export procedures for seamless data downloads to common statistical packages; and 4) procedures for data integration and interoperability with external sources (Harris et al (2009) &lt;doi:10.1016/j.jbi.2008.08.010&gt;; Harris et al (2019) &lt;doi:10.1016/j.jbi.2019.103208&gt;).">
<meta property="og:description" content="Originally forked from the R part of REDCapRITS by Paul Egeler. See &lt;https://github.com/pegeler/REDCapRITS&gt;. REDCap database casting and handling of castellated data when using repeated instruments and longitudinal projects. Keeps a focused data export approach, by allowing to only export required data from the database. Also for casting new REDCap databases based on datasets from other sources. REDCap (Research Electronic Data Capture) is a secure, web-based software platform designed to support data capture for research studies, providing 1) an intuitive interface for validated data capture; 2) audit trails for tracking data manipulation and export procedures; 3) automated export procedures for seamless data downloads to common statistical packages; and 4) procedures for data integration and interoperability with external sources (Harris et al (2009) &lt;doi:10.1016/j.jbi.2008.08.010&gt;; Harris et al (2019) &lt;doi:10.1016/j.jbi.2019.103208&gt;).">
<meta property="og:image" content="https://agdamsbo.github.io/REDCapCAST/logo.png">
</head>
<body>
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<a class="navbar-brand me-2" href="index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.11.1</small>
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</h2>
<p>I started working on this project as the castellated longitudinal data set was a little challenging. Later, I have come to learn of the <a href="https://github.com/vubiostat/redcapAPI" class="external-link"><code>redcapAPI</code></a> package, which would also cover this functionality. I find the <code>redcapAPI</code>package quite advanced and a little difficult to work with. This have led to the continued work on this package, as an easy-to-use approach for data migration, data base creation and data handling. This package is very much to be seen as an attempt at a R-to-REDCap-to-R foundry for handling both the transition from dataset/variable list to database and the other way, from REDCap database to a tidy dataset. The goal was also to allow for a “minimal data” approach by allowing to filter records, instruments and variables in the export to only download data needed. I think this approach is desirable for handling sensitive, clinical data. Please refer to <a href="https://redcap-tools.github.io/" class="external-link">REDCap-Tools</a> for other great tools for working with REDCap in R.</p>
<p>For any more advanced uses, consider using the <a href="https://github.com/vubiostat/redcapAPI" class="external-link"><code>redcapAPI</code></a> or <a href="https://ouhscbbmc.github.io/REDCapR/" class="external-link"><code>REDCapR</code></a> packages.</p>
<p>What is unique in this package, is the work towards making it a lot easier to move data from different sources to REDCap databases: casting REDCap metadata based on a spreadsheet. This is all wrapped in <code><a href="reference/shiny_cast.html">shiny_cast()</a></code>and <a href="https://agdamsbo.shinyapps.io/redcapcast/" class="external-link">hosted for all to use here</a>.</p>
</div>
<div class="section level2">
<h2 id="main-functionality">Main functionality<a class="anchor" aria-label="anchor" href="#main-functionality"></a>
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<li><p><code><a href="reference/easy_redcap.html">easy_redcap()</a></code>: combines secure API key storage with the <code>keyring</code>-package, focused data retrieval and optional widening. This is the recommended approach for easy data access and analysis.</p></li>
<li><p><code><a href="reference/ds2dd_detailed.html">ds2dd_detailed()</a></code>: Converts a data set to a data dictionary for upload to a new REDCap database. Variables (fields) and instruments in a REDCap data base are defined by this data dictionary.</p></li>
<li><p><code><a href="reference/doc2dd.html">doc2dd()</a></code>: Converts a document table to data dictionary. This allows to specify instrument or whole data dictionary in text document, which for most is easier to work with and easily modifiable. Very much like a easy version of just working directly in the data dictionary file itself.</p></li>
<li><p><code><a href="reference/shiny_cast.html">shiny_cast()</a></code>: <a href="https://shiny.posit.co/" class="external-link">Shiny</a> application to ease the process of converting a spreadsheet/data set to a REDCap database. The app runs locally and data is transferred securely. You can just create and upload the data dictionary, but you can also transfer the given data in the same process. The app is <a href="https://agdamsbo.shinyapps.io/redcapcast/" class="external-link">hosted on shinyapps.io</a> <del>while I work on a <a href="https://posit-dev.github.io/r-shinylive/" class="external-link">shinylive</a> implementation</del>.</p></li>
<li><p><code><a href="reference/shiny_cast.html">shiny_cast()</a></code>: <a href="https://shiny.posit.co/" class="external-link">Shiny</a> application to ease the process of converting a spreadsheet/data set to a REDCap database. The app runs locally and data is transferred securely. You can just create and upload the data dictionary, but you can also transfer the given data in the same process. The app is <a href="https://agdamsbo.shinyapps.io/redcapcast/" class="external-link">hosted on shinyapps.io</a>.</p></li>
</ul>
</div>
<div class="section level2">
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<p>Install the latest version directly from GitHub:</p>
<pre><code><span><span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">require</a></span><span class="op">(</span><span class="st"><a href="https://remotes.r-lib.org" class="external-link">"remotes"</a></span><span class="op">)</span></span>
<span><span class="fu">remotes</span><span class="fu">::</span><span class="fu"><a href="https://remotes.r-lib.org/reference/install_github.html" class="external-link">install_github</a></span><span class="op">(</span><span class="st">"agdamsbo/REDCapCAST"</span><span class="op">)</span></span></code></pre>
<p>Launch the REDCapCAST app interface directly on your own machine:</p>
<pre><code><span><span class="fu">REDCapCAST</span><span class="fu">::</span><span class="fu"><a href="reference/shiny_cast.html">shiny_cast</a></span><span class="op">(</span><span class="op">)</span></span></code></pre>
</div>
<div class="section level2">
<h2 id="code-of-conduct">Code of Conduct<a class="anchor" aria-label="anchor" href="#code-of-conduct"></a>

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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.11.1</small>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
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</div>
<div class="section level2">
<h2 class="pkg-version" data-toc-text="24.10.4" id="redcapcast-24104">REDCapCAST 24.10.4<a class="anchor" aria-label="anchor" href="#redcapcast-24104"></a></h2>
<h2 class="pkg-version" data-toc-text="24.11.1" id="redcapcast-24111">REDCapCAST 24.11.1<a class="anchor" aria-label="anchor" href="#redcapcast-24111"></a></h2>
<p>Revised tests.</p>
<p>Documentation has been slightly updated to highlight the shiny app for casting REDCap metadata. I am working on hosting my own Shiny Server.</p>
<div class="section level4">
<h4 id="functions-24-10-4">Functions:<a class="anchor" aria-label="anchor" href="#functions-24-10-4"></a></h4>
<h4 id="functions-24-11-1">Functions:<a class="anchor" aria-label="anchor" href="#functions-24-11-1"></a></h4>
<ul><li><p>Bug: ‘form.name’ specified to ‘ds2dd_detailed()’ was ignored. Corrected to only be ignored if ‘form.sep’ is specified. Added handling of re-occurring <code>form.sep</code> pattern.</p></li>
<li><p>New: <code><a href="../reference/export_redcap_instrument.html">export_redcap_instrument()</a></code> is a new version of <code><a href="../reference/create_instrument_meta.html">create_instrument_meta()</a></code>, that will only export a single instrument. Multiple instrument export can be done with <code><a href="https://rdrr.io/r/base/lapply.html" class="external-link">lapply()</a></code> or <code><a href="https://purrr.tidyverse.org/reference/map.html" class="external-link">purrr::map()</a></code>. This allows for inclusion of this functionality in the Shiny implementation and is easier to handle. <code><a href="../reference/create_instrument_meta.html">create_instrument_meta()</a></code> is deprecated.</p></li>
<li><p>Improved: <code><a href="../reference/shiny_cast.html">shiny_cast()</a></code> app has been updated to actually work if you install the package and not clones the whole repository.</p></li>
</ul></div>
<div class="section level4">
<h4 id="shiny-24-10-4">Shiny:<a class="anchor" aria-label="anchor" href="#shiny-24-10-4"></a></h4>
<ul><li>New: Export a REDCap instrument ready to add to your database based on an uploaded spreadsheet. This is thanks to the <code><a href="../reference/export_redcap_instrument.html">export_redcap_instrument()</a></code> function. THis functionality is intended for projects in production and adding instruments should be handled manually and not by API upload.</li>
<h4 id="shiny-24-11-1">Shiny:<a class="anchor" aria-label="anchor" href="#shiny-24-11-1"></a></h4>
<ul><li><p>New: Major overhaul of the app interface with the introduction of <code>bslib</code> for building the page. Also Detailed documentation added for the app workflow.</p></li>
<li><p>New: Export a REDCap instrument ready to add to your database based on an uploaded spreadsheet. This is thanks to the <code><a href="../reference/export_redcap_instrument.html">export_redcap_instrument()</a></code> function. THis functionality is intended for projects in production and adding instruments should be handled manually and not by API upload.</p></li>
<li><p>Bug: Export datadictionary with “” instead of “NA” for NAs. Upload to REDCap failed. Not anymore.</p></li>
</ul><p>The shiny implementation is included with this package. Implementing in shinylive may be looked into again later.</p>
</div>
</div>

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Database-creation: Database-creation.html
Introduction: Introduction.html
Shiny-app: Shiny-app.html
last_built: 2024-10-25T08:35Z
last_built: 2024-11-15T19:57Z
urls:
reference: https://agdamsbo.github.io/REDCapCAST/reference
article: https://agdamsbo.github.io/REDCapCAST/articles

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<!DOCTYPE html>
<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><title>REDCapCAST: REDCap Castellated Data Handling — REDCapCAST-package • REDCapCAST</title><!-- favicons --><link rel="icon" type="image/png" sizes="16x16" href="../favicon-16x16.png"><link rel="icon" type="image/png" sizes="32x32" href="../favicon-32x32.png"><link rel="apple-touch-icon" type="image/png" sizes="180x180" href="../apple-touch-icon.png"><link rel="apple-touch-icon" type="image/png" sizes="120x120" href="../apple-touch-icon-120x120.png"><link rel="apple-touch-icon" type="image/png" sizes="76x76" href="../apple-touch-icon-76x76.png"><link rel="apple-touch-icon" type="image/png" sizes="60x60" href="../apple-touch-icon-60x60.png"><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/font-awesome-6.4.2/css/all.min.css" rel="stylesheet"><link href="../deps/font-awesome-6.4.2/css/v4-shims.min.css" rel="stylesheet"><script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><meta property="og:title" content="REDCapCAST: REDCap Castellated Data Handling — REDCapCAST-package"><meta name="description" content="
Originally forked from the R part of 'REDCapRITS' by Paul Egeler. See https://github.com/pegeler/REDCapRITS. 'REDCap' database casting and handling of castellated data when using repeated instruments and longitudinal projects. Keeps a focused data export approach, by allowing to only export required data from the database. 'REDCap' (Research Electronic Data Capture) is a secure, web-based software platform designed to support data capture for research studies, providing 1) an intuitive interface for validated data capture; 2) audit trails for tracking data manipulation and export procedures; 3) automated export procedures for seamless data downloads to common statistical packages; and 4) procedures for data integration and interoperability with external sources (Harris et al (2009) doi:10.1016/j.jbi.2008.08.010
<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><title>REDCapCAST: REDCap Castellated Data Handling And Metadata Casting — REDCapCAST-package • REDCapCAST</title><!-- favicons --><link rel="icon" type="image/png" sizes="16x16" href="../favicon-16x16.png"><link rel="icon" type="image/png" sizes="32x32" href="../favicon-32x32.png"><link rel="apple-touch-icon" type="image/png" sizes="180x180" href="../apple-touch-icon.png"><link rel="apple-touch-icon" type="image/png" sizes="120x120" href="../apple-touch-icon-120x120.png"><link rel="apple-touch-icon" type="image/png" sizes="76x76" href="../apple-touch-icon-76x76.png"><link rel="apple-touch-icon" type="image/png" sizes="60x60" href="../apple-touch-icon-60x60.png"><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/font-awesome-6.4.2/css/all.min.css" rel="stylesheet"><link href="../deps/font-awesome-6.4.2/css/v4-shims.min.css" rel="stylesheet"><script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><meta property="og:title" content="REDCapCAST: REDCap Castellated Data Handling And Metadata Casting — REDCapCAST-package"><meta name="description" content="
Originally forked from the R part of 'REDCapRITS' by Paul Egeler. See https://github.com/pegeler/REDCapRITS. 'REDCap' database casting and handling of castellated data when using repeated instruments and longitudinal projects. Keeps a focused data export approach, by allowing to only export required data from the database. Also for casting new REDCap databases based on datasets from other sources. 'REDCap' (Research Electronic Data Capture) is a secure, web-based software platform designed to support data capture for research studies, providing 1) an intuitive interface for validated data capture; 2) audit trails for tracking data manipulation and export procedures; 3) automated export procedures for seamless data downloads to common statistical packages; and 4) procedures for data integration and interoperability with external sources (Harris et al (2009) doi:10.1016/j.jbi.2008.08.010
; Harris et al (2019) doi:10.1016/j.jbi.2019.103208
)."><meta property="og:description" content="
Originally forked from the R part of 'REDCapRITS' by Paul Egeler. See https://github.com/pegeler/REDCapRITS. 'REDCap' database casting and handling of castellated data when using repeated instruments and longitudinal projects. Keeps a focused data export approach, by allowing to only export required data from the database. 'REDCap' (Research Electronic Data Capture) is a secure, web-based software platform designed to support data capture for research studies, providing 1) an intuitive interface for validated data capture; 2) audit trails for tracking data manipulation and export procedures; 3) automated export procedures for seamless data downloads to common statistical packages; and 4) procedures for data integration and interoperability with external sources (Harris et al (2009) doi:10.1016/j.jbi.2008.08.010
Originally forked from the R part of 'REDCapRITS' by Paul Egeler. See https://github.com/pegeler/REDCapRITS. 'REDCap' database casting and handling of castellated data when using repeated instruments and longitudinal projects. Keeps a focused data export approach, by allowing to only export required data from the database. Also for casting new REDCap databases based on datasets from other sources. 'REDCap' (Research Electronic Data Capture) is a secure, web-based software platform designed to support data capture for research studies, providing 1) an intuitive interface for validated data capture; 2) audit trails for tracking data manipulation and export procedures; 3) automated export procedures for seamless data downloads to common statistical packages; and 4) procedures for data integration and interoperability with external sources (Harris et al (2009) doi:10.1016/j.jbi.2008.08.010
; Harris et al (2019) doi:10.1016/j.jbi.2019.103208
)."><meta property="og:image" content="https://agdamsbo.github.io/REDCapCAST/logo.png"></head><body>
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@ -13,7 +13,7 @@ Originally forked from the R part of 'REDCapRITS' by Paul Egeler. See https://gi
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
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@ -39,14 +39,14 @@ Originally forked from the R part of 'REDCapRITS' by Paul Egeler. See https://gi
</nav><div class="container template-reference-topic">
<div class="row">
<main id="main" class="col-md-9"><div class="page-header">
<img src="../logo.png" class="logo" alt=""><h1>REDCapCAST: REDCap Castellated Data Handling</h1>
<img src="../logo.png" class="logo" alt=""><h1>REDCapCAST: REDCap Castellated Data Handling And Metadata Casting</h1>
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/REDCapCAST/blob/main/R/REDCapCAST-package.R" class="external-link"><code>R/REDCapCAST-package.R</code></a></small>
<div class="d-none name"><code>REDCapCAST-package.Rd</code></div>
</div>
<div class="ref-description section level2">
<p></p>
<p>Originally forked from the R part of 'REDCapRITS' by Paul Egeler. See <a href="https://github.com/pegeler/REDCapRITS" class="external-link">https://github.com/pegeler/REDCapRITS</a>. 'REDCap' database casting and handling of castellated data when using repeated instruments and longitudinal projects. Keeps a focused data export approach, by allowing to only export required data from the database. 'REDCap' (Research Electronic Data Capture) is a secure, web-based software platform designed to support data capture for research studies, providing 1) an intuitive interface for validated data capture; 2) audit trails for tracking data manipulation and export procedures; 3) automated export procedures for seamless data downloads to common statistical packages; and 4) procedures for data integration and interoperability with external sources (Harris et al (2009) <a href="https://doi.org/10.1016/j.jbi.2008.08.010" class="external-link">doi:10.1016/j.jbi.2008.08.010</a>
<p>Originally forked from the R part of 'REDCapRITS' by Paul Egeler. See <a href="https://github.com/pegeler/REDCapRITS" class="external-link">https://github.com/pegeler/REDCapRITS</a>. 'REDCap' database casting and handling of castellated data when using repeated instruments and longitudinal projects. Keeps a focused data export approach, by allowing to only export required data from the database. Also for casting new REDCap databases based on datasets from other sources. 'REDCap' (Research Electronic Data Capture) is a secure, web-based software platform designed to support data capture for research studies, providing 1) an intuitive interface for validated data capture; 2) audit trails for tracking data manipulation and export procedures; 3) automated export procedures for seamless data downloads to common statistical packages; and 4) procedures for data integration and interoperability with external sources (Harris et al (2009) <a href="https://doi.org/10.1016/j.jbi.2008.08.010" class="external-link">doi:10.1016/j.jbi.2008.08.010</a>
; Harris et al (2019) <a href="https://doi.org/10.1016/j.jbi.2019.103208" class="external-link">doi:10.1016/j.jbi.2019.103208</a>
).</p>
</div>

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@ -13,7 +13,7 @@ production."><meta property="og:image" content="https://agdamsbo.github.io/REDCa
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@ -17,7 +17,7 @@ data dictionary, but gives a few options for formatting."><meta property="og:ima
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@ -9,7 +9,7 @@ for a more advanced function."><meta property="og:image" content="https://agdams
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@ -13,7 +13,7 @@ production."><meta property="og:image" content="https://agdamsbo.github.io/REDCa
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@ -13,7 +13,7 @@ has to be converted to character class before REDCap upload.'><meta property="og
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@ -283,12 +283,6 @@
<dd>Sanitize list of data frames</dd>
</dl><dl><dt>
<code><a href="server_factory.html">server_factory()</a></code>
</dt>
<dd>Shiny server factory</dd>
</dl><dl><dt>
<code><a href="shiny_cast.html">shiny_cast()</a></code>
</dt>
@ -311,12 +305,6 @@
</dt>
<dd>Correction based on time_only_filter function</dd>
</dl><dl><dt>
<code><a href="ui_factory.html">ui_factory()</a></code>
</dt>
<dd>UI factory for shiny app</dd>
</dl></div>
</main></div>

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reference/process_user_input.character.html
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reference/process_user_input.response.html
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@ -7,7 +7,7 @@
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reference/read_input.html
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@ -7,7 +7,7 @@
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reference/read_redcap_instrument.html
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@ -9,7 +9,7 @@ in keyring."><meta property="og:image" content="https://agdamsbo.github.io/REDCa
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@ -15,7 +15,7 @@ instruments."><meta property="og:image" content="https://agdamsbo.github.io/REDC
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@ -9,7 +9,7 @@ Handles longitudinal projects, but not yet repeated instruments."><meta property
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reference/redcapcast_data.html
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@ -9,7 +9,7 @@ Contains only synthetic data."><meta property="og:image" content="https://agdams
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@ -9,7 +9,7 @@ on CRAN. Github:https://github.com/trinker/textclean"><meta property="og:image"
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@ -7,7 +7,7 @@
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reference/shiny_cast.html
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@ -1,5 +1,5 @@
<!DOCTYPE html>
<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><title>Launch the included Shiny-app for database casting and upload — shiny_cast • REDCapCAST</title><!-- favicons --><link rel="icon" type="image/png" sizes="16x16" href="../favicon-16x16.png"><link rel="icon" type="image/png" sizes="32x32" href="../favicon-32x32.png"><link rel="apple-touch-icon" type="image/png" sizes="180x180" href="../apple-touch-icon.png"><link rel="apple-touch-icon" type="image/png" sizes="120x120" href="../apple-touch-icon-120x120.png"><link rel="apple-touch-icon" type="image/png" sizes="76x76" href="../apple-touch-icon-76x76.png"><link rel="apple-touch-icon" type="image/png" sizes="60x60" href="../apple-touch-icon-60x60.png"><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/font-awesome-6.4.2/css/all.min.css" rel="stylesheet"><link href="../deps/font-awesome-6.4.2/css/v4-shims.min.css" rel="stylesheet"><script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><meta property="og:title" content="Launch the included Shiny-app for database casting and upload — shiny_cast"><meta name="description" content="Launch the included Shiny-app for database casting and upload"><meta property="og:description" content="Launch the included Shiny-app for database casting and upload"><meta property="og:image" content="https://agdamsbo.github.io/REDCapCAST/logo.png"></head><body>
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@ -7,7 +7,7 @@
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
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@ -39,14 +39,22 @@
</div>
<div class="ref-description section level2">
<p>Launch the included Shiny-app for database casting and upload</p>
<p>Wraps shiny::runApp()</p>
</div>
<div class="section level2">
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">shiny_cast</span><span class="op">(</span><span class="op">)</span></span></code></pre></div>
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">shiny_cast</span><span class="op">(</span><span class="va">...</span><span class="op">)</span></span></code></pre></div>
</div>
<div class="section level2">
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
<dl><dt id="arg--">...<a class="anchor" aria-label="anchor" href="#arg--"></a></dt>
<dd><p>Arguments passed to shiny::runApp()</p></dd>
</dl></div>
<div class="section level2">
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
<p>shiny app</p>

2
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@ -9,7 +9,7 @@ easing the split around the defined delimiter, see example."><meta property="og:
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@ -7,7 +7,7 @@
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