105 lines
2.8 KiB
R
105 lines
2.8 KiB
R
server <- function(input, output, session) {
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library(dplyr)
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library(ggplot2)
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library(tidyr)
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source("https://raw.githubusercontent.com/agdamsbo/ENIGMAtrial_R/main/src/plot_index.R")
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source("https://raw.githubusercontent.com/agdamsbo/ENIGMAtrial_R/main/src/index_from_raw.R")
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dat<-reactive({
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df<-data.frame(record_id="1",
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ab=input$version,
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age=input$age,
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imm=input$rs1,
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vis=input$rs2,
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ver=input$rs3,
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att=input$rs4,
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del=input$rs5,
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stringsAsFactors = FALSE)
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return(df)
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})
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dat_u<-reactive({
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# input$file1 will be NULL initially. After the user selects
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# and uploads a file, head of that data file by default,
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# or all rows if selected, will be shown.
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req(input$file1)
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df <- read.csv(input$file1$datapath,
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header = input$header,
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sep = input$sep,
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quote = input$quote)
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return(df)
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})
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dat_f<-reactive({
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if (input$type==1){
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return(dat())}
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if (input$type==2){
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return(head(dat_u(),10))}
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})
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index_p <- reactive({ df<-index_from_raw(ds=dat_f(),
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indx=read.csv("https://raw.githubusercontent.com/agdamsbo/ENIGMAtrial_R/main/data/index.csv"),
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version = dat_f()$ab,
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age = dat_f()$age,
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raw_columns=c("imm","vis","ver","att","del"))
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colnames(df)<-c("id",
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"immediate_is",
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"visuospatial_is",
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"verbal_is",
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"attention_is",
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"delayed_is",
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"total_is",
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"immediate_ci",
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"visuospatial_ci",
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"verbal_ci",
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"attention_ci",
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"delayed_ci",
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"total_ci",
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"immediate_per",
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"visuospatial_per",
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"verbal_per",
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"attention_per",
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"delayed_per",
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"total_per")
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return(df)
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})
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output$ndx.tbl <- renderTable({
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index_p()|>
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select("id",contains("_is"))
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})
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output$per.tbl <- renderTable({
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index_p()|>
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select("id",contains("_per"))
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})
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output$ndx.plt<-renderPlot({
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plot_index(index_p(),sub_plot = "_is")
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})
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output$per.plt<-renderPlot({
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plot_index(index_p(),sub_plot = "_per")
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})
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# Downloadable csv of selected dataset ----
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output$downloadData <- downloadHandler(
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filename = "index_lookup.csv",
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content = function(file) {
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write.csv(index_p(), file, row.names = FALSE)
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}
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)
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}
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