Added subcategories for final upload and posting.
This commit is contained in:
AG Damsbo
parent
ee38f4ce89
commit
83bbcd5849
@ -188,8 +188,10 @@ dta <- dta %>% na.omit # Only keeping correctly coded cases
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Adding term and subcat
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Adding term and subcat
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```{r warning=FALSE}
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```{r warning=FALSE}
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# Subcategory name is the combined soc_term and adj_subcat for additional details in the final report.
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for (i in 1:nrow(dta)){
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for (i in 1:nrow(dta)){
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dta$term[i]<-soc_code$soc_term[soc_code$meddra==dta$soc[i]]
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dta$term[i]<-soc_code$soc_term[soc_code$meddra==dta$soc[i]]
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dta$subcat[i]<-paste0(dta$term[i],": ",adj_tbl$subcat[adj_tbl$code==dta$adj_code[i]])
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}
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}
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```
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```
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@ -198,7 +200,7 @@ for (i in 1:nrow(dta)){
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## Creating specified data frame
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## Creating specified data frame
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```{r}
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```{r}
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df<-data.frame(subjid=dta$rnumb,
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df<-data.frame(subjid=dta$rnumb,
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term=dta$term,
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term=dta$subcat,
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soc=as.integer(dta$soc),
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soc=as.integer(dta$soc),
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serious=dta$serious,
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serious=dta$serious,
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related=dta$related_bin,
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related=dta$related_bin,
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EudraCT reporting/eudract.log
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EudraCT reporting/eudract.log
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