Skip to contents

Includes table 1, grotta bars and ordinal logistic regression plot. Please just use this function for illustration purposes. To dos:

Usage

generic_stroke(df, group, score, strata = NULL, variables = NULL)

Arguments

df

Data set as data frame

group

Variable to group by

score

Outcome measure variable

strata

Optional variable to stratify by

variables

String of variable names to include in adjusted OLR-analysis

Value

Returns list with three elements

Examples

iris$ord<-factor(sample(1:3,size=nrow(iris),replace=TRUE),ordered=TRUE) 
generic_stroke(df=iris, group = "Species", score = "ord", variables = colnames(iris)[1:3])
#> Waiting for profiling to be done...
#> $`Table 1`
#> <div id="evsybsvldj" style="overflow-x:auto;overflow-y:auto;width:auto;height:auto;">
#>   <style>html {
#>   font-family: -apple-system, BlinkMacSystemFont, 'Segoe UI', Roboto, Oxygen, Ubuntu, Cantarell, 'Helvetica Neue', 'Fira Sans', 'Droid Sans', Arial, sans-serif;
#> }
#> 
#> #evsybsvldj .gt_table {
#>   display: table;
#>   border-collapse: collapse;
#>   margin-left: auto;
#>   margin-right: auto;
#>   color: #333333;
#>   font-size: 16px;
#>   font-weight: normal;
#>   font-style: normal;
#>   background-color: #FFFFFF;
#>   width: auto;
#>   border-top-style: solid;
#>   border-top-width: 2px;
#>   border-top-color: #A8A8A8;
#>   border-right-style: none;
#>   border-right-width: 2px;
#>   border-right-color: #D3D3D3;
#>   border-bottom-style: solid;
#>   border-bottom-width: 2px;
#>   border-bottom-color: #A8A8A8;
#>   border-left-style: none;
#>   border-left-width: 2px;
#>   border-left-color: #D3D3D3;
#> }
#> 
#> #evsybsvldj .gt_heading {
#>   background-color: #FFFFFF;
#>   text-align: center;
#>   border-bottom-color: #FFFFFF;
#>   border-left-style: none;
#>   border-left-width: 1px;
#>   border-left-color: #D3D3D3;
#>   border-right-style: none;
#>   border-right-width: 1px;
#>   border-right-color: #D3D3D3;
#> }
#> 
#> #evsybsvldj .gt_title {
#>   color: #333333;
#>   font-size: 125%;
#>   font-weight: initial;
#>   padding-top: 4px;
#>   padding-bottom: 4px;
#>   padding-left: 5px;
#>   padding-right: 5px;
#>   border-bottom-color: #FFFFFF;
#>   border-bottom-width: 0;
#> }
#> 
#> #evsybsvldj .gt_subtitle {
#>   color: #333333;
#>   font-size: 85%;
#>   font-weight: initial;
#>   padding-top: 0;
#>   padding-bottom: 6px;
#>   padding-left: 5px;
#>   padding-right: 5px;
#>   border-top-color: #FFFFFF;
#>   border-top-width: 0;
#> }
#> 
#> #evsybsvldj .gt_bottom_border {
#>   border-bottom-style: solid;
#>   border-bottom-width: 2px;
#>   border-bottom-color: #D3D3D3;
#> }
#> 
#> #evsybsvldj .gt_col_headings {
#>   border-top-style: solid;
#>   border-top-width: 2px;
#>   border-top-color: #D3D3D3;
#>   border-bottom-style: solid;
#>   border-bottom-width: 2px;
#>   border-bottom-color: #D3D3D3;
#>   border-left-style: none;
#>   border-left-width: 1px;
#>   border-left-color: #D3D3D3;
#>   border-right-style: none;
#>   border-right-width: 1px;
#>   border-right-color: #D3D3D3;
#> }
#> 
#> #evsybsvldj .gt_col_heading {
#>   color: #333333;
#>   background-color: #FFFFFF;
#>   font-size: 100%;
#>   font-weight: normal;
#>   text-transform: inherit;
#>   border-left-style: none;
#>   border-left-width: 1px;
#>   border-left-color: #D3D3D3;
#>   border-right-style: none;
#>   border-right-width: 1px;
#>   border-right-color: #D3D3D3;
#>   vertical-align: bottom;
#>   padding-top: 5px;
#>   padding-bottom: 6px;
#>   padding-left: 5px;
#>   padding-right: 5px;
#>   overflow-x: hidden;
#> }
#> 
#> #evsybsvldj .gt_column_spanner_outer {
#>   color: #333333;
#>   background-color: #FFFFFF;
#>   font-size: 100%;
#>   font-weight: normal;
#>   text-transform: inherit;
#>   padding-top: 0;
#>   padding-bottom: 0;
#>   padding-left: 4px;
#>   padding-right: 4px;
#> }
#> 
#> #evsybsvldj .gt_column_spanner_outer:first-child {
#>   padding-left: 0;
#> }
#> 
#> #evsybsvldj .gt_column_spanner_outer:last-child {
#>   padding-right: 0;
#> }
#> 
#> #evsybsvldj .gt_column_spanner {
#>   border-bottom-style: solid;
#>   border-bottom-width: 2px;
#>   border-bottom-color: #D3D3D3;
#>   vertical-align: bottom;
#>   padding-top: 5px;
#>   padding-bottom: 5px;
#>   overflow-x: hidden;
#>   display: inline-block;
#>   width: 100%;
#> }
#> 
#> #evsybsvldj .gt_group_heading {
#>   padding-top: 8px;
#>   padding-bottom: 8px;
#>   padding-left: 5px;
#>   padding-right: 5px;
#>   color: #333333;
#>   background-color: #FFFFFF;
#>   font-size: 100%;
#>   font-weight: initial;
#>   text-transform: inherit;
#>   border-top-style: solid;
#>   border-top-width: 2px;
#>   border-top-color: #D3D3D3;
#>   border-bottom-style: solid;
#>   border-bottom-width: 2px;
#>   border-bottom-color: #D3D3D3;
#>   border-left-style: none;
#>   border-left-width: 1px;
#>   border-left-color: #D3D3D3;
#>   border-right-style: none;
#>   border-right-width: 1px;
#>   border-right-color: #D3D3D3;
#>   vertical-align: middle;
#> }
#> 
#> #evsybsvldj .gt_empty_group_heading {
#>   padding: 0.5px;
#>   color: #333333;
#>   background-color: #FFFFFF;
#>   font-size: 100%;
#>   font-weight: initial;
#>   border-top-style: solid;
#>   border-top-width: 2px;
#>   border-top-color: #D3D3D3;
#>   border-bottom-style: solid;
#>   border-bottom-width: 2px;
#>   border-bottom-color: #D3D3D3;
#>   vertical-align: middle;
#> }
#> 
#> #evsybsvldj .gt_from_md > :first-child {
#>   margin-top: 0;
#> }
#> 
#> #evsybsvldj .gt_from_md > :last-child {
#>   margin-bottom: 0;
#> }
#> 
#> #evsybsvldj .gt_row {
#>   padding-top: 8px;
#>   padding-bottom: 8px;
#>   padding-left: 5px;
#>   padding-right: 5px;
#>   margin: 10px;
#>   border-top-style: solid;
#>   border-top-width: 1px;
#>   border-top-color: #D3D3D3;
#>   border-left-style: none;
#>   border-left-width: 1px;
#>   border-left-color: #D3D3D3;
#>   border-right-style: none;
#>   border-right-width: 1px;
#>   border-right-color: #D3D3D3;
#>   vertical-align: middle;
#>   overflow-x: hidden;
#> }
#> 
#> #evsybsvldj .gt_stub {
#>   color: #333333;
#>   background-color: #FFFFFF;
#>   font-size: 100%;
#>   font-weight: initial;
#>   text-transform: inherit;
#>   border-right-style: solid;
#>   border-right-width: 2px;
#>   border-right-color: #D3D3D3;
#>   padding-left: 5px;
#>   padding-right: 5px;
#> }
#> 
#> #evsybsvldj .gt_stub_row_group {
#>   color: #333333;
#>   background-color: #FFFFFF;
#>   font-size: 100%;
#>   font-weight: initial;
#>   text-transform: inherit;
#>   border-right-style: solid;
#>   border-right-width: 2px;
#>   border-right-color: #D3D3D3;
#>   padding-left: 5px;
#>   padding-right: 5px;
#>   vertical-align: top;
#> }
#> 
#> #evsybsvldj .gt_row_group_first td {
#>   border-top-width: 2px;
#> }
#> 
#> #evsybsvldj .gt_summary_row {
#>   color: #333333;
#>   background-color: #FFFFFF;
#>   text-transform: inherit;
#>   padding-top: 8px;
#>   padding-bottom: 8px;
#>   padding-left: 5px;
#>   padding-right: 5px;
#> }
#> 
#> #evsybsvldj .gt_first_summary_row {
#>   border-top-style: solid;
#>   border-top-color: #D3D3D3;
#> }
#> 
#> #evsybsvldj .gt_first_summary_row.thick {
#>   border-top-width: 2px;
#> }
#> 
#> #evsybsvldj .gt_last_summary_row {
#>   padding-top: 8px;
#>   padding-bottom: 8px;
#>   padding-left: 5px;
#>   padding-right: 5px;
#>   border-bottom-style: solid;
#>   border-bottom-width: 2px;
#>   border-bottom-color: #D3D3D3;
#> }
#> 
#> #evsybsvldj .gt_grand_summary_row {
#>   color: #333333;
#>   background-color: #FFFFFF;
#>   text-transform: inherit;
#>   padding-top: 8px;
#>   padding-bottom: 8px;
#>   padding-left: 5px;
#>   padding-right: 5px;
#> }
#> 
#> #evsybsvldj .gt_first_grand_summary_row {
#>   padding-top: 8px;
#>   padding-bottom: 8px;
#>   padding-left: 5px;
#>   padding-right: 5px;
#>   border-top-style: double;
#>   border-top-width: 6px;
#>   border-top-color: #D3D3D3;
#> }
#> 
#> #evsybsvldj .gt_striped {
#>   background-color: rgba(128, 128, 128, 0.05);
#> }
#> 
#> #evsybsvldj .gt_table_body {
#>   border-top-style: solid;
#>   border-top-width: 2px;
#>   border-top-color: #D3D3D3;
#>   border-bottom-style: solid;
#>   border-bottom-width: 2px;
#>   border-bottom-color: #D3D3D3;
#> }
#> 
#> #evsybsvldj .gt_footnotes {
#>   color: #333333;
#>   background-color: #FFFFFF;
#>   border-bottom-style: none;
#>   border-bottom-width: 2px;
#>   border-bottom-color: #D3D3D3;
#>   border-left-style: none;
#>   border-left-width: 2px;
#>   border-left-color: #D3D3D3;
#>   border-right-style: none;
#>   border-right-width: 2px;
#>   border-right-color: #D3D3D3;
#> }
#> 
#> #evsybsvldj .gt_footnote {
#>   margin: 0px;
#>   font-size: 90%;
#>   padding-left: 4px;
#>   padding-right: 4px;
#>   padding-left: 5px;
#>   padding-right: 5px;
#> }
#> 
#> #evsybsvldj .gt_sourcenotes {
#>   color: #333333;
#>   background-color: #FFFFFF;
#>   border-bottom-style: none;
#>   border-bottom-width: 2px;
#>   border-bottom-color: #D3D3D3;
#>   border-left-style: none;
#>   border-left-width: 2px;
#>   border-left-color: #D3D3D3;
#>   border-right-style: none;
#>   border-right-width: 2px;
#>   border-right-color: #D3D3D3;
#> }
#> 
#> #evsybsvldj .gt_sourcenote {
#>   font-size: 90%;
#>   padding-top: 4px;
#>   padding-bottom: 4px;
#>   padding-left: 5px;
#>   padding-right: 5px;
#> }
#> 
#> #evsybsvldj .gt_left {
#>   text-align: left;
#> }
#> 
#> #evsybsvldj .gt_center {
#>   text-align: center;
#> }
#> 
#> #evsybsvldj .gt_right {
#>   text-align: right;
#>   font-variant-numeric: tabular-nums;
#> }
#> 
#> #evsybsvldj .gt_font_normal {
#>   font-weight: normal;
#> }
#> 
#> #evsybsvldj .gt_font_bold {
#>   font-weight: bold;
#> }
#> 
#> #evsybsvldj .gt_font_italic {
#>   font-style: italic;
#> }
#> 
#> #evsybsvldj .gt_super {
#>   font-size: 65%;
#> }
#> 
#> #evsybsvldj .gt_footnote_marks {
#>   font-style: italic;
#>   font-weight: normal;
#>   font-size: 75%;
#>   vertical-align: 0.4em;
#> }
#> 
#> #evsybsvldj .gt_asterisk {
#>   font-size: 100%;
#>   vertical-align: 0;
#> }
#> 
#> #evsybsvldj .gt_indent_1 {
#>   text-indent: 5px;
#> }
#> 
#> #evsybsvldj .gt_indent_2 {
#>   text-indent: 10px;
#> }
#> 
#> #evsybsvldj .gt_indent_3 {
#>   text-indent: 15px;
#> }
#> 
#> #evsybsvldj .gt_indent_4 {
#>   text-indent: 20px;
#> }
#> 
#> #evsybsvldj .gt_indent_5 {
#>   text-indent: 25px;
#> }
#> </style>
#>   <table class="gt_table">
#>   
#>   <thead class="gt_col_headings">
#>     <tr>
#>       <th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col"><strong>Characteristic</strong></th>
#>       <th class="gt_col_heading gt_columns_bottom_border gt_center" rowspan="1" colspan="1" scope="col"><strong>Overall</strong>, N = 150<sup class="gt_footnote_marks">1</sup></th>
#>       <th class="gt_col_heading gt_columns_bottom_border gt_center" rowspan="1" colspan="1" scope="col"><strong>setosa</strong>, N = 50<sup class="gt_footnote_marks">1</sup></th>
#>       <th class="gt_col_heading gt_columns_bottom_border gt_center" rowspan="1" colspan="1" scope="col"><strong>versicolor</strong>, N = 50<sup class="gt_footnote_marks">1</sup></th>
#>       <th class="gt_col_heading gt_columns_bottom_border gt_center" rowspan="1" colspan="1" scope="col"><strong>virginica</strong>, N = 50<sup class="gt_footnote_marks">1</sup></th>
#>     </tr>
#>   </thead>
#>   <tbody class="gt_table_body">
#>     <tr><td class="gt_row gt_left">Sepal.Length</td>
#> <td class="gt_row gt_center">5.80 (5.10, 6.40)</td>
#> <td class="gt_row gt_center">5.00 (4.80, 5.20)</td>
#> <td class="gt_row gt_center">5.90 (5.60, 6.30)</td>
#> <td class="gt_row gt_center">6.50 (6.23, 6.90)</td></tr>
#>     <tr><td class="gt_row gt_left">Sepal.Width</td>
#> <td class="gt_row gt_center">3.00 (2.80, 3.30)</td>
#> <td class="gt_row gt_center">3.40 (3.20, 3.68)</td>
#> <td class="gt_row gt_center">2.80 (2.53, 3.00)</td>
#> <td class="gt_row gt_center">3.00 (2.80, 3.18)</td></tr>
#>     <tr><td class="gt_row gt_left">Petal.Length</td>
#> <td class="gt_row gt_center">4.35 (1.60, 5.10)</td>
#> <td class="gt_row gt_center">1.50 (1.40, 1.58)</td>
#> <td class="gt_row gt_center">4.35 (4.00, 4.60)</td>
#> <td class="gt_row gt_center">5.55 (5.10, 5.88)</td></tr>
#>   </tbody>
#>   
#>   <tfoot class="gt_footnotes">
#>     <tr>
#>       <td class="gt_footnote" colspan="5"><sup class="gt_footnote_marks">1</sup> Median (IQR)</td>
#>     </tr>
#>   </tfoot>
#> </table>
#> </div>
#> 
#> $`Figure 1`

#> 
#> $`Figure 2`

#>