CRAN-SUBMISSION

@@ -1,3 +1,3 @@
-Version: 23.6.3
+Version: 23.4.1
-Date: 2023-07-03 12:02:38 UTC
+Date: 2023-04-13 11:57:00 UTC
-SHA: ff9270d1e9493760f5aef123d52f48e0148f8da2
+SHA: 86bb9dc95357d5861603e3d487b59e1761edcded

DESCRIPTION

@@ -1,6 +1,6 @@
 Package: stRoke
 Title: Clinical Stroke Research
-Version: 23.6.3
+Version: 23.6.2
 Authors@R: 
     person("Andreas Gammelgaard", "Damsbo", , "agdamsbo@clin.au.dk", role = c("aut", "cre"),
            comment = c(ORCID = "0000-0002-7559-1154"))

NEWS.md

@@ -1,9 +1,3 @@
-# stRoke 23.6.3
-
-### Bug
-
-* Fixed `ds2dd()` bug after first practical implementation.
-
 # stRoke 23.6.2
 
 ### Functions:

R/ds2dd.R

@@ -13,8 +13,6 @@ utils::globalVariables(c("metadata_names"))
 #' names.
 #' @param include.column.names Flag to give detailed output including new
 #' column names for original data set for upload.
-#' @param metadata Metadata dataframe. Default is the included 
-#' stRoke::metadata_names.
 #'
 #' @return data.frame or list of data.frame and vector
 #' @export
@@ -29,10 +27,9 @@ ds2dd <-
            form.name = "basis",
            field.type = "text",
            field.label = NULL,
-           include.column.names = FALSE,
+           include.column.names = FALSE) {
-           metadata = stRoke::metadata_names) {
+    dd <- data.frame(matrix(ncol = length(metadata_names), nrow = ncol(ds)))
-    dd <- data.frame(matrix(ncol = length(metadata), nrow = ncol(ds)))
+    colnames(dd) <- metadata_names
-    colnames(dd) <- metadata
     
     if (is.character(record.id) & !record.id %in% colnames(ds)) {
       stop("Provided record.id is not a variable name in provided data set.")

README.md

@@ -1,7 +1,7 @@
 <!-- badges: start -->
 [![GitHub R package version](https://img.shields.io/github/r-package/v/agdamsbo/stRoke)](https://github.com/agdamsbo/stRoke)
 [![CRAN/METACRAN](https://img.shields.io/cran/v/stRoke)](https://CRAN.R-project.org/package=stRoke)
-[![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.8013980.svg)](https://doi.org/10.5281/zenodo.8013980)
+[![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.8013981.svg)](https://doi.org/10.5281/zenodo.8013981)
 [![Github Actions](https://github.com/agdamsbo/stRoke/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/agdamsbo/stRoke/actions/workflows/R-CMD-check.yaml)
 [![Page deployed](https://github.com/agdamsbo/stRoke/actions/workflows/pages/pages-build-deployment/badge.svg)](https://github.com/agdamsbo/stRoke/actions/workflows/pages/pages-build-deployment)
 [![Codecov test coverage](https://codecov.io/gh/agdamsbo/stRoke/branch/main/graph/badge.svg)](https://app.codecov.io/gh/agdamsbo/stRoke?branch=main)

cran-comments.md

@@ -1,49 +1,45 @@
+####
+This is a new package version
+
+## Test environments
+- R-hub windows-x86_64-devel (r-devel)
+- R-hub ubuntu-gcc-release (r-release)
+- R-hub fedora-clang-devel (r-devel)
+
 ## R CMD check results
-
+❯ On windows-x86_64-devel (r-devel)
-0 errors | 0 warnings | 1 note
+  checking for detritus in the temp directory ... NOTE
-
-* This is a new release.
-
-## From 'rhub::check_for_cran()'
-
-> results
-
-── stRoke 23.6.3: NOTE
-
-  Build ID:   stRoke_23.6.3.tar.gz-02460c19f45e403eb1b115ac763abc6d
-  Platform:   Windows Server 2022, R-devel, 64 bit
-  Submitted:  1h 56m 49.6s ago
-  Build time: 5m 11.1s
-
-❯ checking for non-standard things in the check directory ... NOTE
-  
-
-❯ checking for detritus in the temp directory ... NOTE
   Found the following files/directories:
     'lastMiKTeXException'
 
-0 errors ✔ | 0 warnings ✔ | 2 notes ✖
+❯ On ubuntu-gcc-release (r-release)
+  checking CRAN incoming feasibility ... NOTE
+  Maintainer: ‘Andreas Gammelgaard Damsbo <agdamsbo@clin.au.dk>’
   
-── stRoke 23.6.3: NOTE
+  Found the following (possibly) invalid URLs:
+    URL: https://doi.org/10.1161/STROKEAHA.117.020067
+      From: inst/doc/toolbox.html
+      Status: 403
+      Message: Forbidden
+    URL: https://doi.org/10.1161/STROKEAHA.121.037744
+      From: inst/doc/toolbox.html
+            NEWS.md
+      Status: 403
+      Message: Forbidden
   
-  Build ID:   stRoke_23.6.3.tar.gz-d174f9de31a94b81b697dd9c28bcdf9f
+  Found the following (possibly) invalid DOIs:
-  Platform:   Ubuntu Linux 20.04.1 LTS, R-release, GCC
+    DOI: 10.1161/STROKEAHA.117.020067
-  Submitted:  1h 56m 49.7s ago
+      From: DESCRIPTION
-  Build time: 1h 20m 33.6s
+      Status: Forbidden
+      Message: 403
+    DOI: 10.1161/STROKEAHA.121.037744
+      From: DESCRIPTION
+      Status: Forbidden
+      Message: 403
 
-❯ checking HTML version of manual ... NOTE
+❯ On fedora-clang-devel (r-devel)
+  checking HTML version of manual ... NOTE
   Skipping checking HTML validation: no command 'tidy' found
 
-0 errors ✔ | 0 warnings ✔ | 1 note ✖
+0 errors ✔ | 0 warnings ✔ | 3 notes ✖
 
-── stRoke 23.6.3: NOTE
-
-  Build ID:   stRoke_23.6.3.tar.gz-22dfd84a4ab244f6ae09928a12737bf0
-  Platform:   Fedora Linux, R-devel, clang, gfortran
-  Submitted:  1h 56m 49.7s ago
-  Build time: 1h 12m 16s
-
-❯ checking HTML version of manual ... NOTE
-  Skipping checking HTML validation: no command 'tidy' found
-
-0 errors ✔ | 0 warnings ✔ | 1 note ✖

man/ds2dd.Rd

@@ -10,8 +10,7 @@ ds2dd(
   form.name = "basis",
   field.type = "text",
   field.label = NULL,
-  include.column.names = FALSE,
+  include.column.names = FALSE
-  metadata = stRoke::metadata_names
 )
 }
 \arguments{
@@ -32,9 +31,6 @@ names.}
 
 \item{include.column.names}{Flag to give detailed output including new
 column names for original data set for upload.}
-
-\item{metadata}{Metadata dataframe. Default is the included
-stRoke::metadata_names.}
 }
 \value{
 data.frame or list of data.frame and vector