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@ -1,3 +1,3 @@
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Version: 23.4.1
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Date: 2023-04-13 11:57:00 UTC
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SHA: 86bb9dc95357d5861603e3d487b59e1761edcded
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Version: 23.6.3
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Date: 2023-07-03 12:02:38 UTC
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SHA: ff9270d1e9493760f5aef123d52f48e0148f8da2
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@ -1,6 +1,6 @@
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Package: stRoke
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Title: Clinical Stroke Research
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Version: 23.6.2
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Version: 23.6.3
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Authors@R:
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person("Andreas Gammelgaard", "Damsbo", , "agdamsbo@clin.au.dk", role = c("aut", "cre"),
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comment = c(ORCID = "0000-0002-7559-1154"))
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6
NEWS.md
6
NEWS.md
@ -1,3 +1,9 @@
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# stRoke 23.6.3
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### Bug
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* Fixed `ds2dd()` bug after first practical implementation.
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# stRoke 23.6.2
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### Functions:
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@ -13,6 +13,8 @@ utils::globalVariables(c("metadata_names"))
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#' names.
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#' @param include.column.names Flag to give detailed output including new
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#' column names for original data set for upload.
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#' @param metadata Metadata dataframe. Default is the included
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#' stRoke::metadata_names.
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#'
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#' @return data.frame or list of data.frame and vector
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#' @export
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@ -27,9 +29,10 @@ ds2dd <-
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form.name = "basis",
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field.type = "text",
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field.label = NULL,
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include.column.names = FALSE) {
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dd <- data.frame(matrix(ncol = length(metadata_names), nrow = ncol(ds)))
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colnames(dd) <- metadata_names
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include.column.names = FALSE,
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metadata = stRoke::metadata_names) {
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dd <- data.frame(matrix(ncol = length(metadata), nrow = ncol(ds)))
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colnames(dd) <- metadata
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if (is.character(record.id) & !record.id %in% colnames(ds)) {
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stop("Provided record.id is not a variable name in provided data set.")
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@ -1,7 +1,7 @@
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<!-- badges: start -->
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[](https://github.com/agdamsbo/stRoke)
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[](https://CRAN.R-project.org/package=stRoke)
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[](https://doi.org/10.5281/zenodo.8013981)
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[](https://doi.org/10.5281/zenodo.8013980)
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[](https://github.com/agdamsbo/stRoke/actions/workflows/R-CMD-check.yaml)
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[](https://github.com/agdamsbo/stRoke/actions/workflows/pages/pages-build-deployment)
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[](https://app.codecov.io/gh/agdamsbo/stRoke?branch=main)
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@ -1,45 +1,49 @@
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####
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This is a new package version
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## Test environments
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- R-hub windows-x86_64-devel (r-devel)
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- R-hub ubuntu-gcc-release (r-release)
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- R-hub fedora-clang-devel (r-devel)
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## R CMD check results
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❯ On windows-x86_64-devel (r-devel)
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checking for detritus in the temp directory ... NOTE
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0 errors | 0 warnings | 1 note
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* This is a new release.
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## From 'rhub::check_for_cran()'
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> results
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── stRoke 23.6.3: NOTE
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Build ID: stRoke_23.6.3.tar.gz-02460c19f45e403eb1b115ac763abc6d
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Platform: Windows Server 2022, R-devel, 64 bit
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Submitted: 1h 56m 49.6s ago
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Build time: 5m 11.1s
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❯ checking for non-standard things in the check directory ... NOTE
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❯ checking for detritus in the temp directory ... NOTE
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Found the following files/directories:
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'lastMiKTeXException'
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❯ On ubuntu-gcc-release (r-release)
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checking CRAN incoming feasibility ... NOTE
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Maintainer: ‘Andreas Gammelgaard Damsbo <agdamsbo@clin.au.dk>’
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Found the following (possibly) invalid URLs:
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URL: https://doi.org/10.1161/STROKEAHA.117.020067
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From: inst/doc/toolbox.html
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Status: 403
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Message: Forbidden
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URL: https://doi.org/10.1161/STROKEAHA.121.037744
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From: inst/doc/toolbox.html
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NEWS.md
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Status: 403
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Message: Forbidden
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Found the following (possibly) invalid DOIs:
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DOI: 10.1161/STROKEAHA.117.020067
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From: DESCRIPTION
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Status: Forbidden
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Message: 403
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DOI: 10.1161/STROKEAHA.121.037744
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From: DESCRIPTION
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Status: Forbidden
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Message: 403
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0 errors ✔ | 0 warnings ✔ | 2 notes ✖
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❯ On fedora-clang-devel (r-devel)
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checking HTML version of manual ... NOTE
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── stRoke 23.6.3: NOTE
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Build ID: stRoke_23.6.3.tar.gz-d174f9de31a94b81b697dd9c28bcdf9f
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Platform: Ubuntu Linux 20.04.1 LTS, R-release, GCC
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Submitted: 1h 56m 49.7s ago
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Build time: 1h 20m 33.6s
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❯ checking HTML version of manual ... NOTE
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Skipping checking HTML validation: no command 'tidy' found
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0 errors ✔ | 0 warnings ✔ | 3 notes ✖
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0 errors ✔ | 0 warnings ✔ | 1 note ✖
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── stRoke 23.6.3: NOTE
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Build ID: stRoke_23.6.3.tar.gz-22dfd84a4ab244f6ae09928a12737bf0
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Platform: Fedora Linux, R-devel, clang, gfortran
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Submitted: 1h 56m 49.7s ago
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Build time: 1h 12m 16s
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❯ checking HTML version of manual ... NOTE
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Skipping checking HTML validation: no command 'tidy' found
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0 errors ✔ | 0 warnings ✔ | 1 note ✖
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@ -10,7 +10,8 @@ ds2dd(
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form.name = "basis",
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field.type = "text",
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field.label = NULL,
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include.column.names = FALSE
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include.column.names = FALSE,
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metadata = stRoke::metadata_names
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)
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}
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\arguments{
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@ -31,6 +32,9 @@ names.}
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\item{include.column.names}{Flag to give detailed output including new
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column names for original data set for upload.}
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\item{metadata}{Metadata dataframe. Default is the included
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stRoke::metadata_names.}
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}
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\value{
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data.frame or list of data.frame and vector
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