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0445b0806b
...
32be68177d
@ -1,3 +1,3 @@
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Version: 23.1.8
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Date: 2023-01-27 08:40:38 UTC
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SHA: 32be68177d94e20b66c8f0915aa195c0c2c7eda5
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Version: 23.1.7
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Date: 2023-01-23 11:49:57 UTC
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SHA: ef2dabc8f563a1b442d67997bd21500f13bf3003
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@ -1,6 +1,6 @@
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Package: stRoke
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Title: Clinical Stroke Research
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Version: 23.4.1
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Version: 23.1.8
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Authors@R:
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person("Andreas Gammelgaard", "Damsbo", , "agdamsbo@clin.au.dk", role = c("aut", "cre"),
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comment = c(ORCID = "0000-0002-7559-1154"))
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@ -30,7 +30,6 @@ Imports:
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calendar,
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dplyr,
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||||
ggplot2,
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grDevices,
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||||
gtsummary,
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lubridate,
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MASS,
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|
@ -2,11 +2,9 @@
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export(age_calc)
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export(ci_plot)
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export(contrast_text)
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export(cpr_check)
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export(cpr_dob)
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export(cpr_female)
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export(ds2dd)
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export(files_filter)
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export(generic_stroke)
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export(index_plot)
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@ -23,7 +21,6 @@ importFrom(calendar,ic_write)
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importFrom(dplyr,if_else)
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importFrom(dplyr,mutate)
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importFrom(dplyr,select)
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importFrom(grDevices,col2rgb)
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importFrom(gtsummary,add_overall)
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importFrom(gtsummary,tbl_summary)
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importFrom(lubridate,dminutes)
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|
13
NEWS.md
13
NEWS.md
@ -1,21 +1,8 @@
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# stRoke 23.4.1
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### Functions:
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* NEW: ds2dd() creates a REDCap data dictionary based on a data set for easy upload. A new vignette will be provided for example use. A separate vignette has been added.
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### Notes:
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* With newer additions to the package, these functions clearly has their potential use also outside stroke research.
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* A new vector with REDCap metadata headers has been added. Can be called with data(metadata_names).
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# stRoke 23.1.8
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### Functions:
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* write_ical() is an easy to use implementation of the package `library(calendar)` for easy conversion of spreadsheets to ical object. Export an .ics file using `calendar::ic_write()`.
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* contrast_text() calculates the best contrast text color for a given background color. For use in graphics.
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|
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### Notes:
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|
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|
@ -1,49 +0,0 @@
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|
||||
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#' @title Contrast Text Color
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#' @description Calculates the best contrast text color for a given background color.
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#' @param background A hex/named color value that represents the background.
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#' @param light_text A hex/named color value that represents the light text color.
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#' @param dark_text A hex/named color value that represents the dark text color.
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#' @param threshold A numeric value between 0 and 1 that is used to determine
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#' the luminance threshold of the background color for text color.
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#' @param method A character string that specifies the method for calculating
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#' the luminance. Three different methods are available:
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#' c("relative","perceived","perceived_2")
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#' @details
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#' This function aids in deciding the font color to print on a given background.
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#' The function is based on the example provided by teppo:
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#' https://stackoverflow.com/a/66669838/21019325.
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#' The different methods provided are based on the methods outlined in the
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#' StackOverflow thread: https://stackoverflow.com/questions/596216/formula-to-determine-perceived-brightness-of-rgb-color
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#' @return A character string that contains the best contrast text color.
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#' @examples
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#' contrast_text(c("#F2F2F2", "blue"))
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#'
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#' contrast_text(c("#F2F2F2", "blue"), method="relative")
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#' @export
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#'
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#' @importFrom grDevices col2rgb
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#'
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contrast_text <- function(background,
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light_text = 'white',
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dark_text = 'black',
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threshold = 0.5,
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method = "perceived_2") {
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if (method == "relative") {
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luminance <- c(c(.2126, .7152, .0722) %*% grDevices::col2rgb(background) / 255)
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} else if (method == "perceived") {
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luminance <- c(c(.299, .587, .114) %*% grDevices::col2rgb(background) / 255)
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} else if (method == "perceived_2") {
|
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luminance <- c(sqrt(colSums((
|
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c(.299, .587, .114) * grDevices::col2rgb(background)
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) ^ 2)) / 255)
|
||||
}
|
||||
|
||||
ifelse(
|
||||
luminance < threshold,
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light_text,
|
||||
dark_text
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||||
)
|
||||
}
|
||||
|
80
R/ds2dd.R
80
R/ds2dd.R
@ -1,80 +0,0 @@
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||||
utils::globalVariables(c("metadata_names"))
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#' Data set to data dictionary function
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#'
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#' @param ds data set
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#' @param record.id name or column number of id variable, moved to first row of
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#' data dictionary, character of integer. Default is "record_id".
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#' @param form.name vector of form names, character string, length 1 or length
|
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#' equal to number of variables. Default is "basis".
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#' @param field.type vector of field types, character string, length 1 or length
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#' equal to number of variables. Default is "text.
|
||||
#' @param field.label vector of form names, character string, length 1 or length
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#' equal to number of variables. Default is NULL and is then identical to field
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#' names.
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#' @param include.column.names Flag to give detailed output including new
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#' column names for original data set for upload.
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#'
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#' @return data.frame or list of data.frame and vector
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#' @export
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#'
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#' @examples
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#' talos$id <- seq_len(nrow(talos))
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#' ds2dd(talos, record.id="id",include.column.names=FALSE)
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ds2dd <-
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function(ds,
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record.id = "record_id",
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form.name = "basis",
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field.type = "text",
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field.label = NULL,
|
||||
include.column.names = FALSE) {
|
||||
dd <- data.frame(matrix(ncol = length(metadata_names), nrow = ncol(ds)))
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||||
colnames(dd) <- metadata_names
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||||
|
||||
if (is.character(record.id) & !record.id %in% colnames(ds)) {
|
||||
stop("Provided record.id is not a variable name in provided data set.")
|
||||
}
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||||
|
||||
# renaming to lower case and substitute spaces with underscore
|
||||
field.name <- gsub(" ", "_", tolower(colnames(ds)))
|
||||
|
||||
# handles both character and integer
|
||||
colsel <-
|
||||
colnames(ds) == colnames(ds[record.id])
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||||
|
||||
if (summary(colsel)[3] != 1) {
|
||||
stop("Provided record.id has to be or refer to a uniquely named column.")
|
||||
}
|
||||
|
||||
dd[, "field_name"] <-
|
||||
c(field.name[colsel], field.name[!colsel])
|
||||
|
||||
if (length(form.name) > 1 & length(form.name) != ncol(ds)) {
|
||||
stop(
|
||||
"Provided form.name should be of length 1 (value is reused) or equal
|
||||
length as number of variables in data set."
|
||||
)
|
||||
}
|
||||
dd[, "form_name"] <- form.name
|
||||
|
||||
if (length(field.type) > 1 & length(field.type) != ncol(ds)) {
|
||||
stop(
|
||||
"Provided field.type should be of length 1 (value is reused) or equal
|
||||
length as number of variables in data set."
|
||||
)
|
||||
}
|
||||
|
||||
dd[, "field_type"] <- field.type
|
||||
|
||||
if (is.null(field.label)) {
|
||||
dd[, "field_label"] <- dd[, "field_name"]
|
||||
} else
|
||||
dd[, "field_label"] <- field.label
|
||||
|
||||
if (include.column.names){
|
||||
list("DataDictionary"=dd,"Column names"=field.name)
|
||||
} else dd
|
||||
}
|
||||
|
||||
|
||||
|
11
R/metadata.R
11
R/metadata.R
@ -1,11 +0,0 @@
|
||||
#' Vector of REDCap metadata headers
|
||||
#'
|
||||
#'
|
||||
#' @format Vector of length 18 with REDCap metadata headers:
|
||||
#' \describe{
|
||||
#' \item{metadata_names}{characterstrings}
|
||||
#' }
|
||||
#' @seealso \url{https://www.project-redcap.org/}
|
||||
#' @usage data(metadata_names)
|
||||
"metadata_names"
|
||||
|
Binary file not shown.
@ -24,7 +24,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="index.html">stRoke</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.4.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.1.8</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
@ -39,7 +39,6 @@
|
||||
<li class="nav-item dropdown">
|
||||
<a href="#" class="nav-link dropdown-toggle" data-bs-toggle="dropdown" role="button" aria-expanded="false" aria-haspopup="true" id="dropdown-articles">Articles</a>
|
||||
<div class="dropdown-menu" aria-labelledby="dropdown-articles">
|
||||
<a class="dropdown-item" href="articles/ds2dd.html">ds2dd</a>
|
||||
<a class="dropdown-item" href="articles/toolbox.html">Toolbox</a>
|
||||
</div>
|
||||
</li>
|
||||
|
@ -26,7 +26,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">stRoke</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.4.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.1.8</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
@ -41,7 +41,6 @@
|
||||
<li class="active nav-item dropdown">
|
||||
<a href="#" class="nav-link dropdown-toggle" data-bs-toggle="dropdown" role="button" aria-expanded="false" aria-haspopup="true" id="dropdown-articles">Articles</a>
|
||||
<div class="dropdown-menu" aria-labelledby="dropdown-articles">
|
||||
<a class="dropdown-item" href="../articles/ds2dd.html">ds2dd</a>
|
||||
<a class="dropdown-item" href="../articles/toolbox.html">Toolbox</a>
|
||||
</div>
|
||||
</li>
|
||||
@ -74,7 +73,6 @@
|
||||
<main id="main" class="col-md-9"><div class="page-header">
|
||||
<img src="" class="logo" alt=""><h1>Toolbox</h1>
|
||||
|
||||
<h4 data-toc-skip class="date">2023-04-12</h4>
|
||||
|
||||
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/stRoke/blob/HEAD/vignettes/toolbox.Rmd" class="external-link"><code>vignettes/toolbox.Rmd</code></a></small>
|
||||
<div class="d-none name"><code>toolbox.Rmd</code></div>
|
||||
@ -216,12 +214,12 @@ model plot (with <code><a href="../reference/ci_plot.html">stRoke::ci_plot()</a>
|
||||
<span> variables <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"hypertension"</span>, <span class="st">"diabetes"</span>, <span class="st">"civil"</span><span class="op">)</span><span class="op">)</span></span>
|
||||
<span><span class="co">#> Waiting for profiling to be done...</span></span>
|
||||
<span><span class="co">#> $`Table 1`</span></span>
|
||||
<span><span class="co">#> <div id="zobrddqsqw" style="padding-left:0px;padding-right:0px;padding-top:10px;padding-bottom:10px;overflow-x:auto;overflow-y:auto;width:auto;height:auto;"></span></span>
|
||||
<span><span class="co">#> <div id="znstbxiwsz" style="padding-left:0px;padding-right:0px;padding-top:10px;padding-bottom:10px;overflow-x:auto;overflow-y:auto;width:auto;height:auto;"></span></span>
|
||||
<span><span class="co">#> <style>html {</span></span>
|
||||
<span><span class="co">#> font-family: -apple-system, BlinkMacSystemFont, 'Segoe UI', Roboto, Oxygen, Ubuntu, Cantarell, 'Helvetica Neue', 'Fira Sans', 'Droid Sans', Arial, sans-serif;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_table {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_table {</span></span>
|
||||
<span><span class="co">#> display: table;</span></span>
|
||||
<span><span class="co">#> border-collapse: collapse;</span></span>
|
||||
<span><span class="co">#> margin-left: auto;</span></span>
|
||||
@ -246,7 +244,7 @@ model plot (with <code><a href="../reference/ci_plot.html">stRoke::ci_plot()</a>
|
||||
<span><span class="co">#> border-left-color: #D3D3D3;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_heading {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_heading {</span></span>
|
||||
<span><span class="co">#> background-color: #FFFFFF;</span></span>
|
||||
<span><span class="co">#> text-align: center;</span></span>
|
||||
<span><span class="co">#> border-bottom-color: #FFFFFF;</span></span>
|
||||
@ -258,12 +256,12 @@ model plot (with <code><a href="../reference/ci_plot.html">stRoke::ci_plot()</a>
|
||||
<span><span class="co">#> border-right-color: #D3D3D3;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_caption {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_caption {</span></span>
|
||||
<span><span class="co">#> padding-top: 4px;</span></span>
|
||||
<span><span class="co">#> padding-bottom: 4px;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_title {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_title {</span></span>
|
||||
<span><span class="co">#> color: #333333;</span></span>
|
||||
<span><span class="co">#> font-size: 125%;</span></span>
|
||||
<span><span class="co">#> font-weight: initial;</span></span>
|
||||
@ -275,7 +273,7 @@ model plot (with <code><a href="../reference/ci_plot.html">stRoke::ci_plot()</a>
|
||||
<span><span class="co">#> border-bottom-width: 0;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_subtitle {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_subtitle {</span></span>
|
||||
<span><span class="co">#> color: #333333;</span></span>
|
||||
<span><span class="co">#> font-size: 85%;</span></span>
|
||||
<span><span class="co">#> font-weight: initial;</span></span>
|
||||
@ -287,13 +285,13 @@ model plot (with <code><a href="../reference/ci_plot.html">stRoke::ci_plot()</a>
|
||||
<span><span class="co">#> border-top-width: 0;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_bottom_border {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_bottom_border {</span></span>
|
||||
<span><span class="co">#> border-bottom-style: solid;</span></span>
|
||||
<span><span class="co">#> border-bottom-width: 2px;</span></span>
|
||||
<span><span class="co">#> border-bottom-color: #D3D3D3;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_col_headings {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_col_headings {</span></span>
|
||||
<span><span class="co">#> border-top-style: solid;</span></span>
|
||||
<span><span class="co">#> border-top-width: 2px;</span></span>
|
||||
<span><span class="co">#> border-top-color: #D3D3D3;</span></span>
|
||||
@ -308,7 +306,7 @@ model plot (with <code><a href="../reference/ci_plot.html">stRoke::ci_plot()</a>
|
||||
<span><span class="co">#> border-right-color: #D3D3D3;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_col_heading {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_col_heading {</span></span>
|
||||
<span><span class="co">#> color: #333333;</span></span>
|
||||
<span><span class="co">#> background-color: #FFFFFF;</span></span>
|
||||
<span><span class="co">#> font-size: 100%;</span></span>
|
||||
@ -328,7 +326,7 @@ model plot (with <code><a href="../reference/ci_plot.html">stRoke::ci_plot()</a>
|
||||
<span><span class="co">#> overflow-x: hidden;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_column_spanner_outer {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_column_spanner_outer {</span></span>
|
||||
<span><span class="co">#> color: #333333;</span></span>
|
||||
<span><span class="co">#> background-color: #FFFFFF;</span></span>
|
||||
<span><span class="co">#> font-size: 100%;</span></span>
|
||||
@ -340,15 +338,15 @@ model plot (with <code><a href="../reference/ci_plot.html">stRoke::ci_plot()</a>
|
||||
<span><span class="co">#> padding-right: 4px;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_column_spanner_outer:first-child {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_column_spanner_outer:first-child {</span></span>
|
||||
<span><span class="co">#> padding-left: 0;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_column_spanner_outer:last-child {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_column_spanner_outer:last-child {</span></span>
|
||||
<span><span class="co">#> padding-right: 0;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_column_spanner {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_column_spanner {</span></span>
|
||||
<span><span class="co">#> border-bottom-style: solid;</span></span>
|
||||
<span><span class="co">#> border-bottom-width: 2px;</span></span>
|
||||
<span><span class="co">#> border-bottom-color: #D3D3D3;</span></span>
|
||||
@ -360,7 +358,7 @@ model plot (with <code><a href="../reference/ci_plot.html">stRoke::ci_plot()</a>
|
||||
<span><span class="co">#> width: 100%;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_group_heading {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_group_heading {</span></span>
|
||||
<span><span class="co">#> padding-top: 8px;</span></span>
|
||||
<span><span class="co">#> padding-bottom: 8px;</span></span>
|
||||
<span><span class="co">#> padding-left: 5px;</span></span>
|
||||
@ -386,7 +384,7 @@ model plot (with <code><a href="../reference/ci_plot.html">stRoke::ci_plot()</a>
|
||||
<span><span class="co">#> text-align: left;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_empty_group_heading {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_empty_group_heading {</span></span>
|
||||
<span><span class="co">#> padding: 0.5px;</span></span>
|
||||
<span><span class="co">#> color: #333333;</span></span>
|
||||
<span><span class="co">#> background-color: #FFFFFF;</span></span>
|
||||
@ -401,15 +399,15 @@ model plot (with <code><a href="../reference/ci_plot.html">stRoke::ci_plot()</a>
|
||||
<span><span class="co">#> vertical-align: middle;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_from_md > :first-child {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_from_md > :first-child {</span></span>
|
||||
<span><span class="co">#> margin-top: 0;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_from_md > :last-child {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_from_md > :last-child {</span></span>
|
||||
<span><span class="co">#> margin-bottom: 0;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_row {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_row {</span></span>
|
||||
<span><span class="co">#> padding-top: 8px;</span></span>
|
||||
<span><span class="co">#> padding-bottom: 8px;</span></span>
|
||||
<span><span class="co">#> padding-left: 5px;</span></span>
|
||||
@ -428,7 +426,7 @@ model plot (with <code><a href="../reference/ci_plot.html">stRoke::ci_plot()</a>
|
||||
<span><span class="co">#> overflow-x: hidden;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_stub {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_stub {</span></span>
|
||||
<span><span class="co">#> color: #333333;</span></span>
|
||||
<span><span class="co">#> background-color: #FFFFFF;</span></span>
|
||||
<span><span class="co">#> font-size: 100%;</span></span>
|
||||
@ -441,7 +439,7 @@ model plot (with <code><a href="../reference/ci_plot.html">stRoke::ci_plot()</a>
|
||||
<span><span class="co">#> padding-right: 5px;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_stub_row_group {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_stub_row_group {</span></span>
|
||||
<span><span class="co">#> color: #333333;</span></span>
|
||||
<span><span class="co">#> background-color: #FFFFFF;</span></span>
|
||||
<span><span class="co">#> font-size: 100%;</span></span>
|
||||
@ -455,11 +453,11 @@ model plot (with <code><a href="../reference/ci_plot.html">stRoke::ci_plot()</a>
|
||||
<span><span class="co">#> vertical-align: top;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_row_group_first td {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_row_group_first td {</span></span>
|
||||
<span><span class="co">#> border-top-width: 2px;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_summary_row {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_summary_row {</span></span>
|
||||
<span><span class="co">#> color: #333333;</span></span>
|
||||
<span><span class="co">#> background-color: #FFFFFF;</span></span>
|
||||
<span><span class="co">#> text-transform: inherit;</span></span>
|
||||
@ -469,16 +467,16 @@ model plot (with <code><a href="../reference/ci_plot.html">stRoke::ci_plot()</a>
|
||||
<span><span class="co">#> padding-right: 5px;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_first_summary_row {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_first_summary_row {</span></span>
|
||||
<span><span class="co">#> border-top-style: solid;</span></span>
|
||||
<span><span class="co">#> border-top-color: #D3D3D3;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_first_summary_row.thick {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_first_summary_row.thick {</span></span>
|
||||
<span><span class="co">#> border-top-width: 2px;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_last_summary_row {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_last_summary_row {</span></span>
|
||||
<span><span class="co">#> padding-top: 8px;</span></span>
|
||||
<span><span class="co">#> padding-bottom: 8px;</span></span>
|
||||
<span><span class="co">#> padding-left: 5px;</span></span>
|
||||
@ -488,7 +486,7 @@ model plot (with <code><a href="../reference/ci_plot.html">stRoke::ci_plot()</a>
|
||||
<span><span class="co">#> border-bottom-color: #D3D3D3;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_grand_summary_row {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_grand_summary_row {</span></span>
|
||||
<span><span class="co">#> color: #333333;</span></span>
|
||||
<span><span class="co">#> background-color: #FFFFFF;</span></span>
|
||||
<span><span class="co">#> text-transform: inherit;</span></span>
|
||||
@ -498,7 +496,7 @@ model plot (with <code><a href="../reference/ci_plot.html">stRoke::ci_plot()</a>
|
||||
<span><span class="co">#> padding-right: 5px;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_first_grand_summary_row {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_first_grand_summary_row {</span></span>
|
||||
<span><span class="co">#> padding-top: 8px;</span></span>
|
||||
<span><span class="co">#> padding-bottom: 8px;</span></span>
|
||||
<span><span class="co">#> padding-left: 5px;</span></span>
|
||||
@ -508,11 +506,11 @@ model plot (with <code><a href="../reference/ci_plot.html">stRoke::ci_plot()</a>
|
||||
<span><span class="co">#> border-top-color: #D3D3D3;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_striped {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_striped {</span></span>
|
||||
<span><span class="co">#> background-color: rgba(128, 128, 128, 0.05);</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_table_body {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_table_body {</span></span>
|
||||
<span><span class="co">#> border-top-style: solid;</span></span>
|
||||
<span><span class="co">#> border-top-width: 2px;</span></span>
|
||||
<span><span class="co">#> border-top-color: #D3D3D3;</span></span>
|
||||
@ -521,7 +519,7 @@ model plot (with <code><a href="../reference/ci_plot.html">stRoke::ci_plot()</a>
|
||||
<span><span class="co">#> border-bottom-color: #D3D3D3;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_footnotes {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_footnotes {</span></span>
|
||||
<span><span class="co">#> color: #333333;</span></span>
|
||||
<span><span class="co">#> background-color: #FFFFFF;</span></span>
|
||||
<span><span class="co">#> border-bottom-style: none;</span></span>
|
||||
@ -535,7 +533,7 @@ model plot (with <code><a href="../reference/ci_plot.html">stRoke::ci_plot()</a>
|
||||
<span><span class="co">#> border-right-color: #D3D3D3;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_footnote {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_footnote {</span></span>
|
||||
<span><span class="co">#> margin: 0px;</span></span>
|
||||
<span><span class="co">#> font-size: 90%;</span></span>
|
||||
<span><span class="co">#> padding-left: 4px;</span></span>
|
||||
@ -544,7 +542,7 @@ model plot (with <code><a href="../reference/ci_plot.html">stRoke::ci_plot()</a>
|
||||
<span><span class="co">#> padding-right: 5px;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_sourcenotes {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_sourcenotes {</span></span>
|
||||
<span><span class="co">#> color: #333333;</span></span>
|
||||
<span><span class="co">#> background-color: #FFFFFF;</span></span>
|
||||
<span><span class="co">#> border-bottom-style: none;</span></span>
|
||||
@ -558,7 +556,7 @@ model plot (with <code><a href="../reference/ci_plot.html">stRoke::ci_plot()</a>
|
||||
<span><span class="co">#> border-right-color: #D3D3D3;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_sourcenote {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_sourcenote {</span></span>
|
||||
<span><span class="co">#> font-size: 90%;</span></span>
|
||||
<span><span class="co">#> padding-top: 4px;</span></span>
|
||||
<span><span class="co">#> padding-bottom: 4px;</span></span>
|
||||
@ -566,64 +564,64 @@ model plot (with <code><a href="../reference/ci_plot.html">stRoke::ci_plot()</a>
|
||||
<span><span class="co">#> padding-right: 5px;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_left {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_left {</span></span>
|
||||
<span><span class="co">#> text-align: left;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_center {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_center {</span></span>
|
||||
<span><span class="co">#> text-align: center;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_right {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_right {</span></span>
|
||||
<span><span class="co">#> text-align: right;</span></span>
|
||||
<span><span class="co">#> font-variant-numeric: tabular-nums;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_font_normal {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_font_normal {</span></span>
|
||||
<span><span class="co">#> font-weight: normal;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_font_bold {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_font_bold {</span></span>
|
||||
<span><span class="co">#> font-weight: bold;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_font_italic {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_font_italic {</span></span>
|
||||
<span><span class="co">#> font-style: italic;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_super {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_super {</span></span>
|
||||
<span><span class="co">#> font-size: 65%;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_footnote_marks {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_footnote_marks {</span></span>
|
||||
<span><span class="co">#> font-style: italic;</span></span>
|
||||
<span><span class="co">#> font-weight: normal;</span></span>
|
||||
<span><span class="co">#> font-size: 75%;</span></span>
|
||||
<span><span class="co">#> vertical-align: 0.4em;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_asterisk {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_asterisk {</span></span>
|
||||
<span><span class="co">#> font-size: 100%;</span></span>
|
||||
<span><span class="co">#> vertical-align: 0;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_indent_1 {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_indent_1 {</span></span>
|
||||
<span><span class="co">#> text-indent: 5px;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_indent_2 {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_indent_2 {</span></span>
|
||||
<span><span class="co">#> text-indent: 10px;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_indent_3 {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_indent_3 {</span></span>
|
||||
<span><span class="co">#> text-indent: 15px;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_indent_4 {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_indent_4 {</span></span>
|
||||
<span><span class="co">#> text-indent: 20px;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </span></span>
|
||||
<span><span class="co">#> #zobrddqsqw .gt_indent_5 {</span></span>
|
||||
<span><span class="co">#> #znstbxiwsz .gt_indent_5 {</span></span>
|
||||
<span><span class="co">#> text-indent: 25px;</span></span>
|
||||
<span><span class="co">#> }</span></span>
|
||||
<span><span class="co">#> </style></span></span>
|
||||
|
@ -1,185 +0,0 @@
|
||||
<!DOCTYPE html>
|
||||
<!-- Generated by pkgdown: do not edit by hand --><html lang="en">
|
||||
<head>
|
||||
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
|
||||
<meta charset="utf-8">
|
||||
<meta http-equiv="X-UA-Compatible" content="IE=edge">
|
||||
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<img src="" class="logo" alt=""><h1>ds2dd</h1>
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<h4 data-toc-skip class="date">2023-04-12</h4>
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<small class="dont-index">Source: <a href="https://github.com/agdamsbo/stRoke/blob/HEAD/vignettes/ds2dd.Rmd" class="external-link"><code>vignettes/ds2dd.Rmd</code></a></small>
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<div class="d-none name"><code>ds2dd.Rmd</code></div>
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</div>
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||||
|
||||
<div class="sourceCode" id="cb1"><pre class="downlit sourceCode r">
|
||||
<code class="sourceCode R"><span><span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va"><a href="https://agdamsbo.github.io/stRoke/" class="external-link">stRoke</a></span><span class="op">)</span></span></code></pre></div>
|
||||
<div class="section level2">
|
||||
<h2 id="easy-data-set-to-data-base-workflow">Easy data set to data base workflow<a class="anchor" aria-label="anchor" href="#easy-data-set-to-data-base-workflow"></a>
|
||||
</h2>
|
||||
<p>This function can be used as a simple tool for creating at data base
|
||||
metadata file for REDCap (called a DataDictionary) based on a given data
|
||||
set file.</p>
|
||||
<div class="section level3">
|
||||
<h3 id="step-1---load-your-data-set">Step 1 - Load your data set<a class="anchor" aria-label="anchor" href="#step-1---load-your-data-set"></a>
|
||||
</h3>
|
||||
<p>Here we’ll use the sample TALOS dataset included with the
|
||||
package.</p>
|
||||
<div class="sourceCode" id="cb2"><pre class="downlit sourceCode r">
|
||||
<code class="sourceCode R"><span><span class="fu"><a href="https://rdrr.io/r/utils/data.html" class="external-link">data</a></span><span class="op">(</span><span class="st">"talos"</span><span class="op">)</span></span>
|
||||
<span><span class="va">ds</span> <span class="op"><-</span> <span class="va">talos</span></span>
|
||||
<span><span class="co"># As the data set lacks an ID column, one is added</span></span>
|
||||
<span><span class="va">ds</span><span class="op">$</span><span class="va">id</span> <span class="op"><-</span> <span class="fu"><a href="https://rdrr.io/r/base/seq.html" class="external-link">seq_len</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/nrow.html" class="external-link">nrow</a></span><span class="op">(</span><span class="va">ds</span><span class="op">)</span><span class="op">)</span></span></code></pre></div>
|
||||
</div>
|
||||
<div class="section level3">
|
||||
<h3 id="step-2---create-the-datadictionary">Step 2 - Create the DataDictionary<a class="anchor" aria-label="anchor" href="#step-2---create-the-datadictionary"></a>
|
||||
</h3>
|
||||
<div class="sourceCode" id="cb3"><pre class="downlit sourceCode r">
|
||||
<code class="sourceCode R"><span><span class="va">datadictionary</span> <span class="op"><-</span> <span class="fu"><a href="../reference/ds2dd.html">ds2dd</a></span><span class="op">(</span><span class="va">ds</span>,record.id <span class="op">=</span> <span class="st">"id"</span>,include.column.names <span class="op">=</span> <span class="cn">TRUE</span><span class="op">)</span></span></code></pre></div>
|
||||
<p>Now additional specifications to the DataDictionary can be made
|
||||
manually, or it can be uploaded and modified manually in the graphical
|
||||
user interface on the web page.</p>
|
||||
<p>The function will transform column names to lower case and substitute
|
||||
spaces for underscores. The output is a list with the DataDictionary and
|
||||
a vector of new column names for the dataset to fit the meta data.</p>
|
||||
</div>
|
||||
<div class="section level3">
|
||||
<h3 id="step-3---meta-data-upload">Step 3 - Meta data upload<a class="anchor" aria-label="anchor" href="#step-3---meta-data-upload"></a>
|
||||
</h3>
|
||||
<p>Now the DataDictionary can be exported as a spreadsheet and uploaded
|
||||
or it can be uploaded using the <code>REDCapR</code> package (only
|
||||
projects with “Development” status).</p>
|
||||
<p>Use one of the two approaches below:</p>
|
||||
<div class="section level4">
|
||||
<h4 id="manual-upload">Manual upload<a class="anchor" aria-label="anchor" href="#manual-upload"></a>
|
||||
</h4>
|
||||
<div class="sourceCode" id="cb4"><pre class="downlit sourceCode r">
|
||||
<code class="sourceCode R"><span><span class="fu"><a href="https://rdrr.io/r/utils/write.table.html" class="external-link">write.csv</a></span><span class="op">(</span><span class="va">datadictionary</span><span class="op">$</span><span class="va">DataDictionary</span>,<span class="st">"datadictionary.csv"</span><span class="op">)</span></span></code></pre></div>
|
||||
</div>
|
||||
<div class="section level4">
|
||||
<h4 id="upload-with-redcapr">Upload with <code>REDCapR</code><a class="anchor" aria-label="anchor" href="#upload-with-redcapr"></a>
|
||||
</h4>
|
||||
<div class="sourceCode" id="cb5"><pre class="downlit sourceCode r">
|
||||
<code class="sourceCode R"><span><span class="fu">REDCapR</span><span class="fu">::</span><span class="fu"><a href="https://ouhscbbmc.github.io/REDCapR/reference/redcap_metadata_write.html" class="external-link">redcap_metadata_write</a></span><span class="op">(</span></span>
|
||||
<span> <span class="va">datadictionary</span><span class="op">$</span><span class="va">DataDictionary</span>,</span>
|
||||
<span> redcap_uri <span class="op">=</span> <span class="fu">keyring</span><span class="fu">::</span><span class="fu"><a href="https://rdrr.io/pkg/keyring/man/key_get.html" class="external-link">key_get</a></span><span class="op">(</span><span class="st">"DB_URI"</span><span class="op">)</span>,</span>
|
||||
<span> token <span class="op">=</span> <span class="fu">keyring</span><span class="fu">::</span><span class="fu"><a href="https://rdrr.io/pkg/keyring/man/key_get.html" class="external-link">key_get</a></span><span class="op">(</span><span class="st">"DB_TOKEN"</span><span class="op">)</span></span>
|
||||
<span><span class="op">)</span></span></code></pre></div>
|
||||
<p>In the <a href="https://agdamsbo.github.io/redcap-r-handbook/" class="external-link">“REDCap R
|
||||
Handbook”</a> more is written on interfacing with REDCap in R using the
|
||||
<code><a href="https://r-lib.github.io/keyring/index.html" class="external-link">library(keyring)</a></code>to store credentials in <a href="https://agdamsbo.github.io/redcap-r-handbook/access.html#sec-getting-access" class="external-link">chapter
|
||||
1.1</a>.</p>
|
||||
</div>
|
||||
</div>
|
||||
<div class="section level3">
|
||||
<h3 id="step-4---data-upload">Step 4 - Data upload<a class="anchor" aria-label="anchor" href="#step-4---data-upload"></a>
|
||||
</h3>
|
||||
<p>The same two options are available for data upload as meta data
|
||||
upload: manual og through <code>REDCapR</code>.</p>
|
||||
<p>Only the latter is shown here.</p>
|
||||
<div class="sourceCode" id="cb6"><pre class="downlit sourceCode r">
|
||||
<code class="sourceCode R"><span><span class="co"># new column nams are applied</span></span>
|
||||
<span><span class="fu"><a href="https://rdrr.io/r/base/colnames.html" class="external-link">colnames</a></span><span class="op">(</span><span class="va">ds</span><span class="op">)</span> <span class="op"><-</span> <span class="va">datadictionary</span><span class="op">$</span><span class="va">`Column names`</span></span>
|
||||
<span></span>
|
||||
<span><span class="fu">REDCapR</span><span class="fu">::</span><span class="fu"><a href="https://ouhscbbmc.github.io/REDCapR/reference/redcap_write.html" class="external-link">redcap_write</a></span><span class="op">(</span></span>
|
||||
<span> <span class="va">ds</span>,</span>
|
||||
<span> redcap_uri <span class="op">=</span> <span class="fu">keyring</span><span class="fu">::</span><span class="fu"><a href="https://rdrr.io/pkg/keyring/man/key_get.html" class="external-link">key_get</a></span><span class="op">(</span><span class="st">"DB_URI"</span><span class="op">)</span>,</span>
|
||||
<span> token <span class="op">=</span> <span class="fu">keyring</span><span class="fu">::</span><span class="fu"><a href="https://rdrr.io/pkg/keyring/man/key_get.html" class="external-link">key_get</a></span><span class="op">(</span><span class="st">"DB_TOKEN"</span><span class="op">)</span></span>
|
||||
<span><span class="op">)</span></span></code></pre></div>
|
||||
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|
||||
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</main><aside class="col-md-3"><nav id="toc"><h2>On this page</h2>
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<footer><div class="pkgdown-footer-left">
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<p>Developed by Andreas Gammelgaard Damsbo.</p>
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<p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.7.</p>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.4.1</small>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.1.8</small>
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@ -54,9 +53,7 @@
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<h3>All vignettes</h3>
|
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<dl><dt><a href="ds2dd.html">ds2dd</a></dt>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.4.1</small>
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@ -24,7 +24,6 @@
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<a class="dropdown-item" href="articles/ds2dd.html">ds2dd</a>
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2
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vendored
2
docs/deps/bootstrap-5.2.2/bootstrap.min.css
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File diff suppressed because one or more lines are too long
@ -40,7 +40,7 @@
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<a class="navbar-brand me-2" href="index.html">stRoke</a>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.4.1</small>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.1.8</small>
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<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
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@ -55,7 +55,6 @@
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<li class="nav-item dropdown">
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<a href="#" class="nav-link dropdown-toggle" data-bs-toggle="dropdown" role="button" aria-expanded="false" aria-haspopup="true" id="dropdown-articles">Articles</a>
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<div class="dropdown-menu" aria-labelledby="dropdown-articles">
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<a class="dropdown-item" href="articles/ds2dd.html">ds2dd</a>
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@ -10,7 +10,7 @@
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<a class="navbar-brand me-2" href="../index.html">stRoke</a>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.4.1</small>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.1.8</small>
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<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
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@ -24,7 +24,6 @@
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<li class="nav-item dropdown">
|
||||
<a href="#" class="nav-link dropdown-toggle" data-bs-toggle="dropdown" role="button" aria-expanded="false" aria-haspopup="true" id="dropdown-articles">Articles</a>
|
||||
<div class="dropdown-menu" aria-labelledby="dropdown-articles">
|
||||
<a class="dropdown-item" href="../articles/ds2dd.html">ds2dd</a>
|
||||
<a class="dropdown-item" href="../articles/toolbox.html">Toolbox</a>
|
||||
</div>
|
||||
</li>
|
||||
@ -51,24 +50,11 @@
|
||||
<small>Source: <a href="https://github.com/agdamsbo/stRoke/blob/HEAD/NEWS.md" class="external-link"><code>NEWS.md</code></a></small>
|
||||
</div>
|
||||
|
||||
<div class="section level2">
|
||||
<h2 class="pkg-version" data-toc-text="23.4.1" id="stroke-2341">stRoke 23.4.1<a class="anchor" aria-label="anchor" href="#stroke-2341"></a></h2>
|
||||
<div class="section level4">
|
||||
<h4 id="functions-23-4-1">Functions:<a class="anchor" aria-label="anchor" href="#functions-23-4-1"></a></h4>
|
||||
<ul><li>NEW: ds2dd() creates a REDCap data dictionary based on a data set for easy upload. A new vignette will be provided for example use. A separate vignette has been added.</li>
|
||||
</ul></div>
|
||||
<div class="section level4">
|
||||
<h4 id="notes-23-4-1">Notes:<a class="anchor" aria-label="anchor" href="#notes-23-4-1"></a></h4>
|
||||
<ul><li>With newer additions to the package, these functions clearly has their potential use also outside stroke research.</li>
|
||||
<li>A new vector with REDCap metadata headers has been added. Can be called with data(metadata_names).</li>
|
||||
</ul></div>
|
||||
</div>
|
||||
<div class="section level2">
|
||||
<h2 class="pkg-version" data-toc-text="23.1.8" id="stroke-2318">stRoke 23.1.8<a class="anchor" aria-label="anchor" href="#stroke-2318"></a></h2>
|
||||
<div class="section level4">
|
||||
<h4 id="functions-23-1-8">Functions:<a class="anchor" aria-label="anchor" href="#functions-23-1-8"></a></h4>
|
||||
<ul><li>write_ical() is an easy to use implementation of the package <code><a href="https://rdrr.io/r/base/library.html" class="external-link">library(calendar)</a></code> for easy conversion of spreadsheets to ical object. Export an .ics file using <code><a href="https://rdrr.io/pkg/calendar/man/ic_write.html" class="external-link">calendar::ic_write()</a></code>.</li>
|
||||
<li>contrast_text() calculates the best contrast text color for a given background color. For use in graphics.</li>
|
||||
</ul></div>
|
||||
<div class="section level4">
|
||||
<h4 id="notes-23-1-8">Notes:<a class="anchor" aria-label="anchor" href="#notes-23-1-8"></a></h4>
|
||||
|
@ -2,7 +2,6 @@ pandoc: 2.19.2
|
||||
pkgdown: 2.0.7
|
||||
pkgdown_sha: ~
|
||||
articles:
|
||||
ds2dd: ds2dd.html
|
||||
toolbox: toolbox.html
|
||||
last_built: 2023-04-12T12:24Z
|
||||
last_built: 2023-01-27T08:32Z
|
||||
|
||||
|
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">stRoke</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.4.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.1.8</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
@ -24,7 +24,6 @@
|
||||
<li class="nav-item dropdown">
|
||||
<a href="#" class="nav-link dropdown-toggle" data-bs-toggle="dropdown" role="button" aria-expanded="false" aria-haspopup="true" id="dropdown-articles">Articles</a>
|
||||
<div class="dropdown-menu" aria-labelledby="dropdown-articles">
|
||||
<a class="dropdown-item" href="../articles/ds2dd.html">ds2dd</a>
|
||||
<a class="dropdown-item" href="../articles/toolbox.html">Toolbox</a>
|
||||
</div>
|
||||
</li>
|
||||
|
Binary file not shown.
Before Width: | Height: | Size: 66 KiB After Width: | Height: | Size: 68 KiB |
@ -14,7 +14,7 @@ Title and axis labels can be added to the ggplot afterwards.'><!-- mathjax --><s
|
||||
|
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<a class="navbar-brand me-2" href="../index.html">stRoke</a>
|
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.4.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.1.8</small>
|
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||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
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||||
@ -28,7 +28,6 @@ Title and axis labels can be added to the ggplot afterwards.'><!-- mathjax --><s
|
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<li class="nav-item dropdown">
|
||||
<a href="#" class="nav-link dropdown-toggle" data-bs-toggle="dropdown" role="button" aria-expanded="false" aria-haspopup="true" id="dropdown-articles">Articles</a>
|
||||
<div class="dropdown-menu" aria-labelledby="dropdown-articles">
|
||||
<a class="dropdown-item" href="../articles/ds2dd.html">ds2dd</a>
|
||||
<a class="dropdown-item" href="../articles/toolbox.html">Toolbox</a>
|
||||
</div>
|
||||
</li>
|
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|
@ -1,138 +0,0 @@
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<!DOCTYPE html>
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<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><meta name="description" content="Calculates the best contrast text color for a given background color."><title>Contrast Text Color — contrast_text • stRoke</title><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.2.2/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.2.2/bootstrap.bundle.min.js"></script><!-- Font Awesome icons --><link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.12.1/css/all.min.css" integrity="sha256-mmgLkCYLUQbXn0B1SRqzHar6dCnv9oZFPEC1g1cwlkk=" crossorigin="anonymous"><link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.12.1/css/v4-shims.min.css" integrity="sha256-wZjR52fzng1pJHwx4aV2AO3yyTOXrcDW7jBpJtTwVxw=" crossorigin="anonymous"><!-- bootstrap-toc --><script src="https://cdn.jsdelivr.net/gh/afeld/bootstrap-toc@v1.0.1/dist/bootstrap-toc.min.js" integrity="sha256-4veVQbu7//Lk5TSmc7YV48MxtMy98e26cf5MrgZYnwo=" crossorigin="anonymous"></script><!-- headroom.js --><script src="https://cdnjs.cloudflare.com/ajax/libs/headroom/0.11.0/headroom.min.js" integrity="sha256-AsUX4SJE1+yuDu5+mAVzJbuYNPHj/WroHuZ8Ir/CkE0=" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/headroom/0.11.0/jQuery.headroom.min.js" integrity="sha256-ZX/yNShbjqsohH1k95liqY9Gd8uOiE1S4vZc+9KQ1K4=" crossorigin="anonymous"></script><!-- clipboard.js --><script src="https://cdnjs.cloudflare.com/ajax/libs/clipboard.js/2.0.6/clipboard.min.js" integrity="sha256-inc5kl9MA1hkeYUt+EC3BhlIgyp/2jDIyBLS6k3UxPI=" crossorigin="anonymous"></script><!-- search --><script src="https://cdnjs.cloudflare.com/ajax/libs/fuse.js/6.4.6/fuse.js" integrity="sha512-zv6Ywkjyktsohkbp9bb45V6tEMoWhzFzXis+LrMehmJZZSys19Yxf1dopHx7WzIKxr5tK2dVcYmaCk2uqdjF4A==" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/autocomplete.js/0.38.0/autocomplete.jquery.min.js" integrity="sha512-GU9ayf+66Xx2TmpxqJpliWbT5PiGYxpaG8rfnBEk1LL8l1KGkRShhngwdXK1UgqhAzWpZHSiYPc09/NwDQIGyg==" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/mark.js/8.11.1/mark.min.js" integrity="sha512-5CYOlHXGh6QpOFA/TeTylKLWfB3ftPsde7AnmhuitiTX4K5SqCLBeKro6sPS8ilsz1Q4NRx3v8Ko2IBiszzdww==" crossorigin="anonymous"></script><!-- pkgdown --><script src="../pkgdown.js"></script><meta property="og:title" content="Contrast Text Color — contrast_text"><meta property="og:description" content="Calculates the best contrast text color for a given background color."><!-- mathjax --><script src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.5/MathJax.js" integrity="sha256-nvJJv9wWKEm88qvoQl9ekL2J+k/RWIsaSScxxlsrv8k=" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.5/config/TeX-AMS-MML_HTMLorMML.js" integrity="sha256-84DKXVJXs0/F8OTMzX4UR909+jtl4G7SPypPavF+GfA=" crossorigin="anonymous"></script><!--[if lt IE 9]>
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<script src="https://oss.maxcdn.com/html5shiv/3.7.3/html5shiv.min.js"></script>
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<script src="https://oss.maxcdn.com/respond/1.4.2/respond.min.js"></script>
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<![endif]--></head><body>
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<a href="#main" class="visually-hidden-focusable">Skip to contents</a>
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||||
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<nav class="navbar fixed-top navbar-light navbar-expand-lg bg-light"><div class="container">
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||||
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||||
<a class="navbar-brand me-2" href="../index.html">stRoke</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.4.1</small>
|
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||||
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||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
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<span class="navbar-toggler-icon"></span>
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</button>
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||||
<div id="navbar" class="collapse navbar-collapse ms-3">
|
||||
<ul class="navbar-nav me-auto"><li class="active nav-item">
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<a class="nav-link" href="../reference/index.html">Reference</a>
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</li>
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<li class="nav-item dropdown">
|
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<a href="#" class="nav-link dropdown-toggle" data-bs-toggle="dropdown" role="button" aria-expanded="false" aria-haspopup="true" id="dropdown-articles">Articles</a>
|
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<div class="dropdown-menu" aria-labelledby="dropdown-articles">
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<a class="dropdown-item" href="../articles/ds2dd.html">ds2dd</a>
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<li class="nav-item">
|
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<a class="nav-link" href="../news/index.html">Changelog</a>
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</li>
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</ul><form class="form-inline my-2 my-lg-0" role="search">
|
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<input type="search" class="form-control me-sm-2" aria-label="Toggle navigation" name="search-input" data-search-index="../search.json" id="search-input" placeholder="Search for" autocomplete="off"></form>
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<a class="external-link nav-link" href="https://github.com/agdamsbo/stRoke/" aria-label="github">
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<span class="fab fa fab fa-github fa-lg"></span>
|
||||
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</a>
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</ul></div>
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||||
|
||||
</div>
|
||||
</nav><div class="container template-reference-topic">
|
||||
<div class="row">
|
||||
<main id="main" class="col-md-9"><div class="page-header">
|
||||
<img src="" class="logo" alt=""><h1>Contrast Text Color</h1>
|
||||
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/stRoke/blob/HEAD/R/contrast_text.R" class="external-link"><code>R/contrast_text.R</code></a></small>
|
||||
<div class="d-none name"><code>contrast_text.Rd</code></div>
|
||||
</div>
|
||||
|
||||
<div class="ref-description section level2">
|
||||
<p>Calculates the best contrast text color for a given background color.</p>
|
||||
</div>
|
||||
|
||||
<div class="section level2">
|
||||
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
|
||||
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">contrast_text</span><span class="op">(</span></span>
|
||||
<span> <span class="va">background</span>,</span>
|
||||
<span> light_text <span class="op">=</span> <span class="st">"white"</span>,</span>
|
||||
<span> dark_text <span class="op">=</span> <span class="st">"black"</span>,</span>
|
||||
<span> threshold <span class="op">=</span> <span class="fl">0.5</span>,</span>
|
||||
<span> method <span class="op">=</span> <span class="st">"perceived_2"</span></span>
|
||||
<span><span class="op">)</span></span></code></pre></div>
|
||||
</div>
|
||||
|
||||
<div class="section level2">
|
||||
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
|
||||
<dl><dt>background</dt>
|
||||
<dd><p>A hex/named color value that represents the background.</p></dd>
|
||||
|
||||
|
||||
<dt>light_text</dt>
|
||||
<dd><p>A hex/named color value that represents the light text color.</p></dd>
|
||||
|
||||
|
||||
<dt>dark_text</dt>
|
||||
<dd><p>A hex/named color value that represents the dark text color.</p></dd>
|
||||
|
||||
|
||||
<dt>threshold</dt>
|
||||
<dd><p>A numeric value between 0 and 1 that is used to determine
|
||||
the luminance threshold of the background color for text color.</p></dd>
|
||||
|
||||
|
||||
<dt>method</dt>
|
||||
<dd><p>A character string that specifies the method for calculating
|
||||
the luminance. Three different methods are available:
|
||||
c("relative","perceived","perceived_2")</p></dd>
|
||||
|
||||
</dl></div>
|
||||
<div class="section level2">
|
||||
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
|
||||
|
||||
|
||||
<p>A character string that contains the best contrast text color.</p>
|
||||
</div>
|
||||
<div class="section level2">
|
||||
<h2 id="details">Details<a class="anchor" aria-label="anchor" href="#details"></a></h2>
|
||||
<p>This function aids in deciding the font color to print on a given background.
|
||||
The function is based on the example provided by teppo:
|
||||
https://stackoverflow.com/a/66669838/21019325.
|
||||
The different methods provided are based on the methods outlined in the
|
||||
StackOverflow thread: https://stackoverflow.com/questions/596216/formula-to-determine-perceived-brightness-of-rgb-color</p>
|
||||
</div>
|
||||
|
||||
<div class="section level2">
|
||||
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
|
||||
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="fu">contrast_text</span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"#F2F2F2"</span>, <span class="st">"blue"</span><span class="op">)</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] "black" "white"</span>
|
||||
<span class="r-in"><span></span></span>
|
||||
<span class="r-in"><span><span class="fu">contrast_text</span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"#F2F2F2"</span>, <span class="st">"blue"</span><span class="op">)</span>, method<span class="op">=</span><span class="st">"relative"</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] "black" "white"</span>
|
||||
</code></pre></div>
|
||||
</div>
|
||||
</main><aside class="col-md-3"><nav id="toc"><h2>On this page</h2>
|
||||
</nav></aside></div>
|
||||
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||||
|
||||
<footer><div class="pkgdown-footer-left">
|
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<p></p><p>Developed by Andreas Gammelgaard Damsbo.</p>
|
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</div>
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||||
<div class="pkgdown-footer-right">
|
||||
<p></p><p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.7.</p>
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</body></html>
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@ -10,7 +10,7 @@
|
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<a class="navbar-brand me-2" href="../index.html">stRoke</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.4.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.1.8</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
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@ -24,7 +24,6 @@
|
||||
<li class="nav-item dropdown">
|
||||
<a href="#" class="nav-link dropdown-toggle" data-bs-toggle="dropdown" role="button" aria-expanded="false" aria-haspopup="true" id="dropdown-articles">Articles</a>
|
||||
<div class="dropdown-menu" aria-labelledby="dropdown-articles">
|
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<a class="dropdown-item" href="../articles/ds2dd.html">ds2dd</a>
|
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<a class="dropdown-item" href="../articles/toolbox.html">Toolbox</a>
|
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</div>
|
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</li>
|
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|
@ -10,7 +10,7 @@
|
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|
||||
<a class="navbar-brand me-2" href="../index.html">stRoke</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.4.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.1.8</small>
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<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
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@ -24,7 +24,6 @@
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<li class="nav-item dropdown">
|
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<a href="#" class="nav-link dropdown-toggle" data-bs-toggle="dropdown" role="button" aria-expanded="false" aria-haspopup="true" id="dropdown-articles">Articles</a>
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<div class="dropdown-menu" aria-labelledby="dropdown-articles">
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<a class="dropdown-item" href="../articles/ds2dd.html">ds2dd</a>
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<a class="dropdown-item" href="../articles/toolbox.html">Toolbox</a>
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@ -10,7 +10,7 @@
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<a class="navbar-brand me-2" href="../index.html">stRoke</a>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.4.1</small>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.1.8</small>
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<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
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@ -24,7 +24,6 @@
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<li class="nav-item dropdown">
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<a href="#" class="nav-link dropdown-toggle" data-bs-toggle="dropdown" role="button" aria-expanded="false" aria-haspopup="true" id="dropdown-articles">Articles</a>
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<div class="dropdown-menu" aria-labelledby="dropdown-articles">
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<a class="dropdown-item" href="../articles/ds2dd.html">ds2dd</a>
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</li>
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@ -12,7 +12,7 @@ for testing purposes."><!-- mathjax --><script src="https://cdnjs.cloudflare.com
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<img src="" class="logo" alt=""><h1>Data set to data dictionary function</h1>
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<small class="dont-index">Source: <a href="https://github.com/agdamsbo/stRoke/blob/HEAD/R/ds2dd.R" class="external-link"><code>R/ds2dd.R</code></a></small>
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<p>Data set to data dictionary function</p>
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<div class="section level2">
|
||||
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
|
||||
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">ds2dd</span><span class="op">(</span></span>
|
||||
<span> <span class="va">ds</span>,</span>
|
||||
<span> record.id <span class="op">=</span> <span class="st">"record_id"</span>,</span>
|
||||
<span> form.name <span class="op">=</span> <span class="st">"basis"</span>,</span>
|
||||
<span> field.type <span class="op">=</span> <span class="st">"text"</span>,</span>
|
||||
<span> field.label <span class="op">=</span> <span class="cn">NULL</span>,</span>
|
||||
<span> include.column.names <span class="op">=</span> <span class="cn">FALSE</span></span>
|
||||
<span><span class="op">)</span></span></code></pre></div>
|
||||
</div>
|
||||
|
||||
<div class="section level2">
|
||||
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
|
||||
<dl><dt>ds</dt>
|
||||
<dd><p>data set</p></dd>
|
||||
|
||||
|
||||
<dt>record.id</dt>
|
||||
<dd><p>name or column number of id variable, moved to first row of
|
||||
data dictionary, character of integer. Default is "record_id".</p></dd>
|
||||
|
||||
|
||||
<dt>form.name</dt>
|
||||
<dd><p>vector of form names, character string, length 1 or length
|
||||
equal to number of variables. Default is "basis".</p></dd>
|
||||
|
||||
|
||||
<dt>field.type</dt>
|
||||
<dd><p>vector of field types, character string, length 1 or length
|
||||
equal to number of variables. Default is "text.</p></dd>
|
||||
|
||||
|
||||
<dt>field.label</dt>
|
||||
<dd><p>vector of form names, character string, length 1 or length
|
||||
equal to number of variables. Default is NULL and is then identical to field
|
||||
names.</p></dd>
|
||||
|
||||
|
||||
<dt>include.column.names</dt>
|
||||
<dd><p>Flag to give detailed output including new
|
||||
column names for original data set for upload.</p></dd>
|
||||
|
||||
</dl></div>
|
||||
<div class="section level2">
|
||||
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
|
||||
|
||||
|
||||
<p>data.frame or list of data.frame and vector</p>
|
||||
</div>
|
||||
|
||||
<div class="section level2">
|
||||
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
|
||||
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="va">talos</span><span class="op">$</span><span class="va">id</span> <span class="op"><-</span> <span class="fu"><a href="https://rdrr.io/r/base/seq.html" class="external-link">seq_len</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/nrow.html" class="external-link">nrow</a></span><span class="op">(</span><span class="va">talos</span><span class="op">)</span><span class="op">)</span></span></span>
|
||||
<span class="r-in"><span><span class="fu">ds2dd</span><span class="op">(</span><span class="va">talos</span>, record.id<span class="op">=</span><span class="st">"id"</span>,include.column.names<span class="op">=</span><span class="cn">FALSE</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> field_name form_name section_header field_type field_label</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 1 id basis NA text id</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 2 rtreat basis NA text rtreat</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 3 mrs_1 basis NA text mrs_1</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 4 mrs_6 basis NA text mrs_6</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 5 hypertension basis NA text hypertension</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 6 diabetes basis NA text diabetes</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 7 civil basis NA text civil</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> select_choices_or_calculations field_note</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 1 NA NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 2 NA NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 3 NA NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 4 NA NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 5 NA NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 6 NA NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 7 NA NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> text_validation_type_or_show_slider_number text_validation_min</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 1 NA NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 2 NA NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 3 NA NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 4 NA NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 5 NA NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 6 NA NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 7 NA NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> text_validation_max identifier branching_logic required_field</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 1 NA NA NA NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 2 NA NA NA NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 3 NA NA NA NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 4 NA NA NA NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 5 NA NA NA NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 6 NA NA NA NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 7 NA NA NA NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> custom_alignment question_number matrix_group_name matrix_ranking</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 1 NA NA NA NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 2 NA NA NA NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 3 NA NA NA NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 4 NA NA NA NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 5 NA NA NA NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 6 NA NA NA NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 7 NA NA NA NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> field_annotation</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 1 NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 2 NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 3 NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 4 NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 5 NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 6 NA</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 7 NA</span>
|
||||
</code></pre></div>
|
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@ -102,12 +101,12 @@ To dos: modify grottaBar and include as own function.</p>
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<span class="r-in"><span>variables <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"hypertension"</span>,<span class="st">"diabetes"</span>,<span class="st">"civil"</span><span class="op">)</span><span class="op">)</span></span></span>
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<span class="r-msg co"><span class="r-pr">#></span> Waiting for profiling to be done...</span>
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<span class="r-out co"><span class="r-pr">#></span> $`Table 1`</span>
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|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_table {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_table {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> display: table;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-collapse: collapse;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> margin-left: auto;</span>
|
||||
@ -132,7 +131,7 @@ To dos: modify grottaBar and include as own function.</p>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-left-color: #D3D3D3;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_heading {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_heading {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> background-color: #FFFFFF;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> text-align: center;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-bottom-color: #FFFFFF;</span>
|
||||
@ -144,12 +143,12 @@ To dos: modify grottaBar and include as own function.</p>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-right-color: #D3D3D3;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_caption {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_caption {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-top: 4px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-bottom: 4px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_title {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_title {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> color: #333333;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-size: 125%;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-weight: initial;</span>
|
||||
@ -161,7 +160,7 @@ To dos: modify grottaBar and include as own function.</p>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-bottom-width: 0;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_subtitle {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_subtitle {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> color: #333333;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-size: 85%;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-weight: initial;</span>
|
||||
@ -173,13 +172,13 @@ To dos: modify grottaBar and include as own function.</p>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-top-width: 0;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_bottom_border {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_bottom_border {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-bottom-style: solid;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-bottom-width: 2px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-bottom-color: #D3D3D3;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_col_headings {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_col_headings {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-top-style: solid;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-top-width: 2px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-top-color: #D3D3D3;</span>
|
||||
@ -194,7 +193,7 @@ To dos: modify grottaBar and include as own function.</p>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-right-color: #D3D3D3;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_col_heading {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_col_heading {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> color: #333333;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> background-color: #FFFFFF;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-size: 100%;</span>
|
||||
@ -214,7 +213,7 @@ To dos: modify grottaBar and include as own function.</p>
|
||||
<span class="r-out co"><span class="r-pr">#></span> overflow-x: hidden;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_column_spanner_outer {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_column_spanner_outer {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> color: #333333;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> background-color: #FFFFFF;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-size: 100%;</span>
|
||||
@ -226,15 +225,15 @@ To dos: modify grottaBar and include as own function.</p>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-right: 4px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_column_spanner_outer:first-child {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_column_spanner_outer:first-child {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-left: 0;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_column_spanner_outer:last-child {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_column_spanner_outer:last-child {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-right: 0;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_column_spanner {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_column_spanner {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-bottom-style: solid;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-bottom-width: 2px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-bottom-color: #D3D3D3;</span>
|
||||
@ -246,7 +245,7 @@ To dos: modify grottaBar and include as own function.</p>
|
||||
<span class="r-out co"><span class="r-pr">#></span> width: 100%;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_group_heading {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_group_heading {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-top: 8px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-bottom: 8px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-left: 5px;</span>
|
||||
@ -272,7 +271,7 @@ To dos: modify grottaBar and include as own function.</p>
|
||||
<span class="r-out co"><span class="r-pr">#></span> text-align: left;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_empty_group_heading {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_empty_group_heading {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding: 0.5px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> color: #333333;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> background-color: #FFFFFF;</span>
|
||||
@ -287,15 +286,15 @@ To dos: modify grottaBar and include as own function.</p>
|
||||
<span class="r-out co"><span class="r-pr">#></span> vertical-align: middle;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_from_md > :first-child {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_from_md > :first-child {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> margin-top: 0;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_from_md > :last-child {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_from_md > :last-child {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> margin-bottom: 0;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_row {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_row {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-top: 8px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-bottom: 8px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-left: 5px;</span>
|
||||
@ -314,7 +313,7 @@ To dos: modify grottaBar and include as own function.</p>
|
||||
<span class="r-out co"><span class="r-pr">#></span> overflow-x: hidden;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_stub {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_stub {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> color: #333333;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> background-color: #FFFFFF;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-size: 100%;</span>
|
||||
@ -327,7 +326,7 @@ To dos: modify grottaBar and include as own function.</p>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-right: 5px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_stub_row_group {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_stub_row_group {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> color: #333333;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> background-color: #FFFFFF;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-size: 100%;</span>
|
||||
@ -341,11 +340,11 @@ To dos: modify grottaBar and include as own function.</p>
|
||||
<span class="r-out co"><span class="r-pr">#></span> vertical-align: top;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_row_group_first td {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_row_group_first td {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-top-width: 2px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_summary_row {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_summary_row {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> color: #333333;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> background-color: #FFFFFF;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> text-transform: inherit;</span>
|
||||
@ -355,16 +354,16 @@ To dos: modify grottaBar and include as own function.</p>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-right: 5px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_first_summary_row {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_first_summary_row {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-top-style: solid;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-top-color: #D3D3D3;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_first_summary_row.thick {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_first_summary_row.thick {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-top-width: 2px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_last_summary_row {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_last_summary_row {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-top: 8px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-bottom: 8px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-left: 5px;</span>
|
||||
@ -374,7 +373,7 @@ To dos: modify grottaBar and include as own function.</p>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-bottom-color: #D3D3D3;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_grand_summary_row {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_grand_summary_row {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> color: #333333;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> background-color: #FFFFFF;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> text-transform: inherit;</span>
|
||||
@ -384,7 +383,7 @@ To dos: modify grottaBar and include as own function.</p>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-right: 5px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_first_grand_summary_row {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_first_grand_summary_row {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-top: 8px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-bottom: 8px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-left: 5px;</span>
|
||||
@ -394,11 +393,11 @@ To dos: modify grottaBar and include as own function.</p>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-top-color: #D3D3D3;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_striped {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_striped {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> background-color: rgba(128, 128, 128, 0.05);</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_table_body {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_table_body {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-top-style: solid;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-top-width: 2px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-top-color: #D3D3D3;</span>
|
||||
@ -407,7 +406,7 @@ To dos: modify grottaBar and include as own function.</p>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-bottom-color: #D3D3D3;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_footnotes {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_footnotes {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> color: #333333;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> background-color: #FFFFFF;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-bottom-style: none;</span>
|
||||
@ -421,7 +420,7 @@ To dos: modify grottaBar and include as own function.</p>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-right-color: #D3D3D3;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_footnote {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_footnote {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> margin: 0px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-size: 90%;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-left: 4px;</span>
|
||||
@ -430,7 +429,7 @@ To dos: modify grottaBar and include as own function.</p>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-right: 5px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_sourcenotes {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_sourcenotes {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> color: #333333;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> background-color: #FFFFFF;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-bottom-style: none;</span>
|
||||
@ -444,7 +443,7 @@ To dos: modify grottaBar and include as own function.</p>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-right-color: #D3D3D3;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_sourcenote {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_sourcenote {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-size: 90%;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-top: 4px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-bottom: 4px;</span>
|
||||
@ -452,64 +451,64 @@ To dos: modify grottaBar and include as own function.</p>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-right: 5px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_left {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_left {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> text-align: left;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_center {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_center {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> text-align: center;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_right {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_right {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> text-align: right;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-variant-numeric: tabular-nums;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_font_normal {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_font_normal {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-weight: normal;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_font_bold {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_font_bold {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-weight: bold;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_font_italic {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_font_italic {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-style: italic;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_super {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_super {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-size: 65%;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_footnote_marks {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_footnote_marks {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-style: italic;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-weight: normal;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-size: 75%;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> vertical-align: 0.4em;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_asterisk {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_asterisk {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-size: 100%;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> vertical-align: 0;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_indent_1 {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_indent_1 {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> text-indent: 5px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_indent_2 {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_indent_2 {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> text-indent: 10px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_indent_3 {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_indent_3 {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> text-indent: 15px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_indent_4 {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_indent_4 {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> text-indent: 20px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #mhgykqimda .gt_indent_5 {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #nbrhcfadcn .gt_indent_5 {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> text-indent: 25px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </style></span>
|
||||
|
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">stRoke</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.4.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.1.8</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
@ -24,7 +24,6 @@
|
||||
<li class="nav-item dropdown">
|
||||
<a href="#" class="nav-link dropdown-toggle" data-bs-toggle="dropdown" role="button" aria-expanded="false" aria-haspopup="true" id="dropdown-articles">Articles</a>
|
||||
<div class="dropdown-menu" aria-labelledby="dropdown-articles">
|
||||
<a class="dropdown-item" href="../articles/ds2dd.html">ds2dd</a>
|
||||
<a class="dropdown-item" href="../articles/toolbox.html">Toolbox</a>
|
||||
</div>
|
||||
</li>
|
||||
@ -73,11 +72,6 @@
|
||||
<dd>Confidence interval plot with point estimate</dd>
|
||||
</dl><dl><dt>
|
||||
|
||||
<code><a href="contrast_text.html">contrast_text()</a></code>
|
||||
</dt>
|
||||
<dd>Contrast Text Color</dd>
|
||||
</dl><dl><dt>
|
||||
|
||||
<code><a href="cpr_check.html">cpr_check()</a></code>
|
||||
</dt>
|
||||
<dd>CPR check</dd>
|
||||
@ -98,11 +92,6 @@
|
||||
<dd>Data frame of 200 cpr numbers</dd>
|
||||
</dl><dl><dt>
|
||||
|
||||
<code><a href="ds2dd.html">ds2dd()</a></code>
|
||||
</dt>
|
||||
<dd>Data set to data dictionary function</dd>
|
||||
</dl><dl><dt>
|
||||
|
||||
<code><a href="files_filter.html">files_filter()</a></code>
|
||||
</dt>
|
||||
<dd>Filter files in a folder</dd>
|
||||
@ -123,11 +112,6 @@
|
||||
<dd>Helper function for labels in gtsummary</dd>
|
||||
</dl><dl><dt>
|
||||
|
||||
<code><a href="metadata_names.html">metadata_names</a></code>
|
||||
</dt>
|
||||
<dd>Vector of REDCap metadata headers</dd>
|
||||
</dl><dl><dt>
|
||||
|
||||
<code><a href="quantile_cut.html">quantile_cut()</a></code>
|
||||
</dt>
|
||||
<dd>Easy function for splitting numeric variable in quantiles</dd>
|
||||
|
@ -12,7 +12,7 @@ Includes option to facet."><!-- mathjax --><script src="https://cdnjs.cloudflare
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">stRoke</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.4.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.1.8</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
@ -26,7 +26,6 @@ Includes option to facet."><!-- mathjax --><script src="https://cdnjs.cloudflare
|
||||
<li class="nav-item dropdown">
|
||||
<a href="#" class="nav-link dropdown-toggle" data-bs-toggle="dropdown" role="button" aria-expanded="false" aria-haspopup="true" id="dropdown-articles">Articles</a>
|
||||
<div class="dropdown-menu" aria-labelledby="dropdown-articles">
|
||||
<a class="dropdown-item" href="../articles/ds2dd.html">ds2dd</a>
|
||||
<a class="dropdown-item" href="../articles/toolbox.html">Toolbox</a>
|
||||
</div>
|
||||
</li>
|
||||
|
@ -12,7 +12,7 @@ Alternative is to use attributes, eg from library(Hmisc).'><!-- mathjax --><scri
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">stRoke</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.4.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.1.8</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
@ -26,7 +26,6 @@ Alternative is to use attributes, eg from library(Hmisc).'><!-- mathjax --><scri
|
||||
<li class="nav-item dropdown">
|
||||
<a href="#" class="nav-link dropdown-toggle" data-bs-toggle="dropdown" role="button" aria-expanded="false" aria-haspopup="true" id="dropdown-articles">Articles</a>
|
||||
<div class="dropdown-menu" aria-labelledby="dropdown-articles">
|
||||
<a class="dropdown-item" href="../articles/ds2dd.html">ds2dd</a>
|
||||
<a class="dropdown-item" href="../articles/toolbox.html">Toolbox</a>
|
||||
</div>
|
||||
</li>
|
||||
@ -93,12 +92,12 @@ Alternative is to use attributes, eg from <code><a href="https://hbiostat.org/R/
|
||||
<span class="r-in"><span><span class="st">'[Intercept]'</span><span class="op">~</span><span class="st">"Intercept"</span><span class="op">)</span></span></span>
|
||||
<span class="r-in"><span><span class="fu">stRoke</span><span class="fu">::</span><span class="va"><a href="talos.html">talos</a></span><span class="op">[</span><span class="va">vars</span><span class="op">]</span> <span class="op">|></span> </span></span>
|
||||
<span class="r-in"><span><span class="fu">gtsummary</span><span class="fu">::</span><span class="fu"><a href="https://www.danieldsjoberg.com/gtsummary/reference/tbl_summary.html" class="external-link">tbl_summary</a></span><span class="op">(</span>label <span class="op">=</span> <span class="fu">label_select</span><span class="op">(</span><span class="va">labels_all</span>,<span class="va">vars</span><span class="op">)</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <div id="bdlvcttqpv" style="padding-left:0px;padding-right:0px;padding-top:10px;padding-bottom:10px;overflow-x:auto;overflow-y:auto;width:auto;height:auto;"></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <div id="adowkpfsxq" style="padding-left:0px;padding-right:0px;padding-top:10px;padding-bottom:10px;overflow-x:auto;overflow-y:auto;width:auto;height:auto;"></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <style>html {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-family: -apple-system, BlinkMacSystemFont, 'Segoe UI', Roboto, Oxygen, Ubuntu, Cantarell, 'Helvetica Neue', 'Fira Sans', 'Droid Sans', Arial, sans-serif;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_table {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_table {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> display: table;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-collapse: collapse;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> margin-left: auto;</span>
|
||||
@ -123,7 +122,7 @@ Alternative is to use attributes, eg from <code><a href="https://hbiostat.org/R/
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-left-color: #D3D3D3;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_heading {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_heading {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> background-color: #FFFFFF;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> text-align: center;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-bottom-color: #FFFFFF;</span>
|
||||
@ -135,12 +134,12 @@ Alternative is to use attributes, eg from <code><a href="https://hbiostat.org/R/
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-right-color: #D3D3D3;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_caption {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_caption {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-top: 4px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-bottom: 4px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_title {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_title {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> color: #333333;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-size: 125%;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-weight: initial;</span>
|
||||
@ -152,7 +151,7 @@ Alternative is to use attributes, eg from <code><a href="https://hbiostat.org/R/
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-bottom-width: 0;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_subtitle {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_subtitle {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> color: #333333;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-size: 85%;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-weight: initial;</span>
|
||||
@ -164,13 +163,13 @@ Alternative is to use attributes, eg from <code><a href="https://hbiostat.org/R/
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-top-width: 0;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_bottom_border {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_bottom_border {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-bottom-style: solid;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-bottom-width: 2px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-bottom-color: #D3D3D3;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_col_headings {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_col_headings {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-top-style: solid;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-top-width: 2px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-top-color: #D3D3D3;</span>
|
||||
@ -185,7 +184,7 @@ Alternative is to use attributes, eg from <code><a href="https://hbiostat.org/R/
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-right-color: #D3D3D3;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_col_heading {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_col_heading {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> color: #333333;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> background-color: #FFFFFF;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-size: 100%;</span>
|
||||
@ -205,7 +204,7 @@ Alternative is to use attributes, eg from <code><a href="https://hbiostat.org/R/
|
||||
<span class="r-out co"><span class="r-pr">#></span> overflow-x: hidden;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_column_spanner_outer {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_column_spanner_outer {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> color: #333333;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> background-color: #FFFFFF;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-size: 100%;</span>
|
||||
@ -217,15 +216,15 @@ Alternative is to use attributes, eg from <code><a href="https://hbiostat.org/R/
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-right: 4px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_column_spanner_outer:first-child {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_column_spanner_outer:first-child {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-left: 0;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_column_spanner_outer:last-child {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_column_spanner_outer:last-child {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-right: 0;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_column_spanner {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_column_spanner {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-bottom-style: solid;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-bottom-width: 2px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-bottom-color: #D3D3D3;</span>
|
||||
@ -237,7 +236,7 @@ Alternative is to use attributes, eg from <code><a href="https://hbiostat.org/R/
|
||||
<span class="r-out co"><span class="r-pr">#></span> width: 100%;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_group_heading {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_group_heading {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-top: 8px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-bottom: 8px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-left: 5px;</span>
|
||||
@ -263,7 +262,7 @@ Alternative is to use attributes, eg from <code><a href="https://hbiostat.org/R/
|
||||
<span class="r-out co"><span class="r-pr">#></span> text-align: left;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_empty_group_heading {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_empty_group_heading {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding: 0.5px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> color: #333333;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> background-color: #FFFFFF;</span>
|
||||
@ -278,15 +277,15 @@ Alternative is to use attributes, eg from <code><a href="https://hbiostat.org/R/
|
||||
<span class="r-out co"><span class="r-pr">#></span> vertical-align: middle;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_from_md > :first-child {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_from_md > :first-child {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> margin-top: 0;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_from_md > :last-child {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_from_md > :last-child {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> margin-bottom: 0;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_row {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_row {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-top: 8px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-bottom: 8px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-left: 5px;</span>
|
||||
@ -305,7 +304,7 @@ Alternative is to use attributes, eg from <code><a href="https://hbiostat.org/R/
|
||||
<span class="r-out co"><span class="r-pr">#></span> overflow-x: hidden;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_stub {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_stub {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> color: #333333;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> background-color: #FFFFFF;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-size: 100%;</span>
|
||||
@ -318,7 +317,7 @@ Alternative is to use attributes, eg from <code><a href="https://hbiostat.org/R/
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-right: 5px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_stub_row_group {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_stub_row_group {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> color: #333333;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> background-color: #FFFFFF;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-size: 100%;</span>
|
||||
@ -332,11 +331,11 @@ Alternative is to use attributes, eg from <code><a href="https://hbiostat.org/R/
|
||||
<span class="r-out co"><span class="r-pr">#></span> vertical-align: top;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_row_group_first td {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_row_group_first td {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-top-width: 2px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_summary_row {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_summary_row {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> color: #333333;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> background-color: #FFFFFF;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> text-transform: inherit;</span>
|
||||
@ -346,16 +345,16 @@ Alternative is to use attributes, eg from <code><a href="https://hbiostat.org/R/
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-right: 5px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_first_summary_row {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_first_summary_row {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-top-style: solid;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-top-color: #D3D3D3;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_first_summary_row.thick {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_first_summary_row.thick {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-top-width: 2px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_last_summary_row {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_last_summary_row {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-top: 8px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-bottom: 8px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-left: 5px;</span>
|
||||
@ -365,7 +364,7 @@ Alternative is to use attributes, eg from <code><a href="https://hbiostat.org/R/
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-bottom-color: #D3D3D3;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_grand_summary_row {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_grand_summary_row {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> color: #333333;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> background-color: #FFFFFF;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> text-transform: inherit;</span>
|
||||
@ -375,7 +374,7 @@ Alternative is to use attributes, eg from <code><a href="https://hbiostat.org/R/
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-right: 5px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_first_grand_summary_row {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_first_grand_summary_row {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-top: 8px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-bottom: 8px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-left: 5px;</span>
|
||||
@ -385,11 +384,11 @@ Alternative is to use attributes, eg from <code><a href="https://hbiostat.org/R/
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-top-color: #D3D3D3;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_striped {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_striped {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> background-color: rgba(128, 128, 128, 0.05);</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_table_body {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_table_body {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-top-style: solid;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-top-width: 2px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-top-color: #D3D3D3;</span>
|
||||
@ -398,7 +397,7 @@ Alternative is to use attributes, eg from <code><a href="https://hbiostat.org/R/
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-bottom-color: #D3D3D3;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_footnotes {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_footnotes {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> color: #333333;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> background-color: #FFFFFF;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-bottom-style: none;</span>
|
||||
@ -412,7 +411,7 @@ Alternative is to use attributes, eg from <code><a href="https://hbiostat.org/R/
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-right-color: #D3D3D3;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_footnote {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_footnote {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> margin: 0px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-size: 90%;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-left: 4px;</span>
|
||||
@ -421,7 +420,7 @@ Alternative is to use attributes, eg from <code><a href="https://hbiostat.org/R/
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-right: 5px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_sourcenotes {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_sourcenotes {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> color: #333333;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> background-color: #FFFFFF;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-bottom-style: none;</span>
|
||||
@ -435,7 +434,7 @@ Alternative is to use attributes, eg from <code><a href="https://hbiostat.org/R/
|
||||
<span class="r-out co"><span class="r-pr">#></span> border-right-color: #D3D3D3;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_sourcenote {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_sourcenote {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-size: 90%;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-top: 4px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-bottom: 4px;</span>
|
||||
@ -443,64 +442,64 @@ Alternative is to use attributes, eg from <code><a href="https://hbiostat.org/R/
|
||||
<span class="r-out co"><span class="r-pr">#></span> padding-right: 5px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_left {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_left {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> text-align: left;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_center {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_center {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> text-align: center;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_right {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_right {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> text-align: right;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-variant-numeric: tabular-nums;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_font_normal {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_font_normal {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-weight: normal;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_font_bold {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_font_bold {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-weight: bold;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_font_italic {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_font_italic {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-style: italic;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_super {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_super {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-size: 65%;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_footnote_marks {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_footnote_marks {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-style: italic;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-weight: normal;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-size: 75%;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> vertical-align: 0.4em;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_asterisk {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_asterisk {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> font-size: 100%;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> vertical-align: 0;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_indent_1 {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_indent_1 {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> text-indent: 5px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_indent_2 {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_indent_2 {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> text-indent: 10px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_indent_3 {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_indent_3 {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> text-indent: 15px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_indent_4 {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_indent_4 {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> text-indent: 20px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #bdlvcttqpv .gt_indent_5 {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> #adowkpfsxq .gt_indent_5 {</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> text-indent: 25px;</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </style></span>
|
||||
|
@ -1,95 +0,0 @@
|
||||
<!DOCTYPE html>
|
||||
<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><meta name="description" content="Vector of REDCap metadata headers"><title>Vector of REDCap metadata headers — metadata_names • stRoke</title><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.2.2/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.2.2/bootstrap.bundle.min.js"></script><!-- Font Awesome icons --><link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.12.1/css/all.min.css" integrity="sha256-mmgLkCYLUQbXn0B1SRqzHar6dCnv9oZFPEC1g1cwlkk=" crossorigin="anonymous"><link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.12.1/css/v4-shims.min.css" integrity="sha256-wZjR52fzng1pJHwx4aV2AO3yyTOXrcDW7jBpJtTwVxw=" crossorigin="anonymous"><!-- bootstrap-toc --><script src="https://cdn.jsdelivr.net/gh/afeld/bootstrap-toc@v1.0.1/dist/bootstrap-toc.min.js" integrity="sha256-4veVQbu7//Lk5TSmc7YV48MxtMy98e26cf5MrgZYnwo=" crossorigin="anonymous"></script><!-- headroom.js --><script src="https://cdnjs.cloudflare.com/ajax/libs/headroom/0.11.0/headroom.min.js" integrity="sha256-AsUX4SJE1+yuDu5+mAVzJbuYNPHj/WroHuZ8Ir/CkE0=" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/headroom/0.11.0/jQuery.headroom.min.js" integrity="sha256-ZX/yNShbjqsohH1k95liqY9Gd8uOiE1S4vZc+9KQ1K4=" crossorigin="anonymous"></script><!-- clipboard.js --><script src="https://cdnjs.cloudflare.com/ajax/libs/clipboard.js/2.0.6/clipboard.min.js" integrity="sha256-inc5kl9MA1hkeYUt+EC3BhlIgyp/2jDIyBLS6k3UxPI=" crossorigin="anonymous"></script><!-- search --><script src="https://cdnjs.cloudflare.com/ajax/libs/fuse.js/6.4.6/fuse.js" integrity="sha512-zv6Ywkjyktsohkbp9bb45V6tEMoWhzFzXis+LrMehmJZZSys19Yxf1dopHx7WzIKxr5tK2dVcYmaCk2uqdjF4A==" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/autocomplete.js/0.38.0/autocomplete.jquery.min.js" integrity="sha512-GU9ayf+66Xx2TmpxqJpliWbT5PiGYxpaG8rfnBEk1LL8l1KGkRShhngwdXK1UgqhAzWpZHSiYPc09/NwDQIGyg==" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/mark.js/8.11.1/mark.min.js" integrity="sha512-5CYOlHXGh6QpOFA/TeTylKLWfB3ftPsde7AnmhuitiTX4K5SqCLBeKro6sPS8ilsz1Q4NRx3v8Ko2IBiszzdww==" crossorigin="anonymous"></script><!-- pkgdown --><script src="../pkgdown.js"></script><meta property="og:title" content="Vector of REDCap metadata headers — metadata_names"><meta property="og:description" content="Vector of REDCap metadata headers"><!-- mathjax --><script src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.5/MathJax.js" integrity="sha256-nvJJv9wWKEm88qvoQl9ekL2J+k/RWIsaSScxxlsrv8k=" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.5/config/TeX-AMS-MML_HTMLorMML.js" integrity="sha256-84DKXVJXs0/F8OTMzX4UR909+jtl4G7SPypPavF+GfA=" crossorigin="anonymous"></script><!--[if lt IE 9]>
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||||
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|
||||
<main id="main" class="col-md-9"><div class="page-header">
|
||||
<img src="" class="logo" alt=""><h1>Vector of REDCap metadata headers</h1>
|
||||
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/stRoke/blob/HEAD/R/metadata.R" class="external-link"><code>R/metadata.R</code></a></small>
|
||||
<div class="d-none name"><code>metadata_names.Rd</code></div>
|
||||
</div>
|
||||
|
||||
<div class="ref-description section level2">
|
||||
<p>Vector of REDCap metadata headers</p>
|
||||
</div>
|
||||
|
||||
<div class="section level2">
|
||||
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
|
||||
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu"><a href="https://rdrr.io/r/utils/data.html" class="external-link">data</a></span><span class="op">(</span><span class="va">metadata_names</span><span class="op">)</span></span></code></pre></div>
|
||||
</div>
|
||||
|
||||
<div class="section level2">
|
||||
<h2 id="format">Format<a class="anchor" aria-label="anchor" href="#format"></a></h2>
|
||||
<p>Vector of length 18 with REDCap metadata headers:</p><dl><dt>metadata_names</dt>
|
||||
<dd><p>characterstrings</p></dd>
|
||||
|
||||
|
||||
</dl></div>
|
||||
<div class="section level2">
|
||||
<h2 id="see-also">See also<a class="anchor" aria-label="anchor" href="#see-also"></a></h2>
|
||||
<div class="dont-index"><p><a href="https://www.project-redcap.org/" class="external-link">https://www.project-redcap.org/</a></p></div>
|
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<p></p><p>Developed by Andreas Gammelgaard Damsbo.</p>
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<p></p><p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.7.</p>
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@ -10,7 +10,7 @@
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.4.1</small>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.1.8</small>
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<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
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@ -24,7 +24,6 @@
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<a href="#" class="nav-link dropdown-toggle" data-bs-toggle="dropdown" role="button" aria-expanded="false" aria-haspopup="true" id="dropdown-articles">Articles</a>
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|
||||
@ -120,8 +119,8 @@ as borders in case of y!=NULL.</p></dd>
|
||||
<span class="r-in"><span><span class="va">x</span> <span class="op"><-</span> <span class="fl">1</span><span class="op">:</span><span class="fl">450</span></span></span>
|
||||
<span class="r-in"><span><span class="va">y</span> <span class="op"><-</span> <span class="fl">6</span><span class="op">:</span><span class="fl">750</span></span></span>
|
||||
<span class="r-in"><span><span class="fu"><a href="https://rdrr.io/r/base/summary.html" class="external-link">summary</a></span><span class="op">(</span><span class="fu">quantile_cut</span><span class="op">(</span><span class="va">aa</span>,groups<span class="op">=</span><span class="fl">4</span>,detail.list<span class="op">=</span><span class="cn">FALSE</span><span class="op">)</span><span class="op">)</span> <span class="co">## Cuts quartiles</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1,266] (266,518] (518,751] (751,1e+03] </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 500 500 500 500 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1,256] (256,498] (498,747] (747,1e+03] </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 503 499 501 497 </span>
|
||||
</code></pre></div>
|
||||
</div>
|
||||
</main><aside class="col-md-3"><nav id="toc"><h2>On this page</h2>
|
||||
|
@ -12,7 +12,7 @@ five-dimensional cognitive test."><!-- mathjax --><script src="https://cdnjs.clo
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">stRoke</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.4.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.1.8</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
@ -26,7 +26,6 @@ five-dimensional cognitive test."><!-- mathjax --><script src="https://cdnjs.clo
|
||||
<li class="nav-item dropdown">
|
||||
<a href="#" class="nav-link dropdown-toggle" data-bs-toggle="dropdown" role="button" aria-expanded="false" aria-haspopup="true" id="dropdown-articles">Articles</a>
|
||||
<div class="dropdown-menu" aria-labelledby="dropdown-articles">
|
||||
<a class="dropdown-item" href="../articles/ds2dd.html">ds2dd</a>
|
||||
<a class="dropdown-item" href="../articles/toolbox.html">Toolbox</a>
|
||||
</div>
|
||||
</li>
|
||||
|
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">stRoke</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.4.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.1.8</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
@ -24,7 +24,6 @@
|
||||
<li class="nav-item dropdown">
|
||||
<a href="#" class="nav-link dropdown-toggle" data-bs-toggle="dropdown" role="button" aria-expanded="false" aria-haspopup="true" id="dropdown-articles">Articles</a>
|
||||
<div class="dropdown-menu" aria-labelledby="dropdown-articles">
|
||||
<a class="dropdown-item" href="../articles/ds2dd.html">ds2dd</a>
|
||||
<a class="dropdown-item" href="../articles/toolbox.html">Toolbox</a>
|
||||
</div>
|
||||
</li>
|
||||
|
@ -16,7 +16,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">stRoke</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.4.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.1.8</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
@ -30,7 +30,6 @@
|
||||
<li class="nav-item dropdown">
|
||||
<a href="#" class="nav-link dropdown-toggle" data-bs-toggle="dropdown" role="button" aria-expanded="false" aria-haspopup="true" id="dropdown-articles">Articles</a>
|
||||
<div class="dropdown-menu" aria-labelledby="dropdown-articles">
|
||||
<a class="dropdown-item" href="../articles/ds2dd.html">ds2dd</a>
|
||||
<a class="dropdown-item" href="../articles/toolbox.html">Toolbox</a>
|
||||
</div>
|
||||
</li>
|
||||
|
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">stRoke</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.4.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.1.8</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
@ -24,7 +24,6 @@
|
||||
<li class="nav-item dropdown">
|
||||
<a href="#" class="nav-link dropdown-toggle" data-bs-toggle="dropdown" role="button" aria-expanded="false" aria-haspopup="true" id="dropdown-articles">Articles</a>
|
||||
<div class="dropdown-menu" aria-labelledby="dropdown-articles">
|
||||
<a class="dropdown-item" href="../articles/ds2dd.html">ds2dd</a>
|
||||
<a class="dropdown-item" href="../articles/toolbox.html">Toolbox</a>
|
||||
</div>
|
||||
</li>
|
||||
|
@ -14,7 +14,7 @@ winning with a confidence interval an p-value testing."><!-- mathjax --><script
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">stRoke</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.4.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.1.8</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
@ -28,7 +28,6 @@ winning with a confidence interval an p-value testing."><!-- mathjax --><script
|
||||
<li class="nav-item dropdown">
|
||||
<a href="#" class="nav-link dropdown-toggle" data-bs-toggle="dropdown" role="button" aria-expanded="false" aria-haspopup="true" id="dropdown-articles">Articles</a>
|
||||
<div class="dropdown-menu" aria-labelledby="dropdown-articles">
|
||||
<a class="dropdown-item" href="../articles/ds2dd.html">ds2dd</a>
|
||||
<a class="dropdown-item" href="../articles/toolbox.html">Toolbox</a>
|
||||
</div>
|
||||
</li>
|
||||
|
@ -12,7 +12,7 @@ Export as .ics file using calendar::ic_write()."><!-- mathjax --><script src="ht
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">stRoke</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.4.1</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">23.1.8</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
@ -26,7 +26,6 @@ Export as .ics file using calendar::ic_write()."><!-- mathjax --><script src="ht
|
||||
<li class="nav-item dropdown">
|
||||
<a href="#" class="nav-link dropdown-toggle" data-bs-toggle="dropdown" role="button" aria-expanded="false" aria-haspopup="true" id="dropdown-articles">Articles</a>
|
||||
<div class="dropdown-menu" aria-labelledby="dropdown-articles">
|
||||
<a class="dropdown-item" href="../articles/ds2dd.html">ds2dd</a>
|
||||
<a class="dropdown-item" href="../articles/toolbox.html">Toolbox</a>
|
||||
</div>
|
||||
</li>
|
||||
|
File diff suppressed because one or more lines are too long
@ -12,9 +12,6 @@
|
||||
<url>
|
||||
<loc>/articles/Toolbox.html</loc>
|
||||
</url>
|
||||
<url>
|
||||
<loc>/articles/ds2dd.html</loc>
|
||||
</url>
|
||||
<url>
|
||||
<loc>/articles/index.html</loc>
|
||||
</url>
|
||||
@ -36,9 +33,6 @@
|
||||
<url>
|
||||
<loc>/reference/ci_plot.html</loc>
|
||||
</url>
|
||||
<url>
|
||||
<loc>/reference/contrast_text.html</loc>
|
||||
</url>
|
||||
<url>
|
||||
<loc>/reference/cpr_check.html</loc>
|
||||
</url>
|
||||
@ -51,9 +45,6 @@
|
||||
<url>
|
||||
<loc>/reference/cprs.html</loc>
|
||||
</url>
|
||||
<url>
|
||||
<loc>/reference/ds2dd.html</loc>
|
||||
</url>
|
||||
<url>
|
||||
<loc>/reference/files_filter.html</loc>
|
||||
</url>
|
||||
@ -72,9 +63,6 @@
|
||||
<url>
|
||||
<loc>/reference/label_select.html</loc>
|
||||
</url>
|
||||
<url>
|
||||
<loc>/reference/metadata_names.html</loc>
|
||||
</url>
|
||||
<url>
|
||||
<loc>/reference/plot_olr.html</loc>
|
||||
</url>
|
||||
|
@ -14,7 +14,6 @@ REDCapRITS
|
||||
RStudio
|
||||
Randomisation
|
||||
STROKEAHA
|
||||
StackOverflow
|
||||
Sys
|
||||
TALOS
|
||||
Vectorised
|
||||
@ -52,7 +51,6 @@ gpttools
|
||||
grotta
|
||||
grottaBar
|
||||
gtsummary
|
||||
https
|
||||
ical
|
||||
icalendar
|
||||
ics
|
||||
@ -61,14 +59,10 @@ jan
|
||||
jss
|
||||
lm
|
||||
lst
|
||||
luminance
|
||||
mRS
|
||||
olr
|
||||
recognised
|
||||
rgb
|
||||
sapply
|
||||
stackoverflow
|
||||
teppo
|
||||
vapply
|
||||
vec
|
||||
winP
|
||||
|
@ -1,46 +0,0 @@
|
||||
% Generated by roxygen2: do not edit by hand
|
||||
% Please edit documentation in R/contrast_text.R
|
||||
\name{contrast_text}
|
||||
\alias{contrast_text}
|
||||
\title{Contrast Text Color}
|
||||
\usage{
|
||||
contrast_text(
|
||||
background,
|
||||
light_text = "white",
|
||||
dark_text = "black",
|
||||
threshold = 0.5,
|
||||
method = "perceived_2"
|
||||
)
|
||||
}
|
||||
\arguments{
|
||||
\item{background}{A hex/named color value that represents the background.}
|
||||
|
||||
\item{light_text}{A hex/named color value that represents the light text color.}
|
||||
|
||||
\item{dark_text}{A hex/named color value that represents the dark text color.}
|
||||
|
||||
\item{threshold}{A numeric value between 0 and 1 that is used to determine
|
||||
the luminance threshold of the background color for text color.}
|
||||
|
||||
\item{method}{A character string that specifies the method for calculating
|
||||
the luminance. Three different methods are available:
|
||||
c("relative","perceived","perceived_2")}
|
||||
}
|
||||
\value{
|
||||
A character string that contains the best contrast text color.
|
||||
}
|
||||
\description{
|
||||
Calculates the best contrast text color for a given background color.
|
||||
}
|
||||
\details{
|
||||
This function aids in deciding the font color to print on a given background.
|
||||
The function is based on the example provided by teppo:
|
||||
https://stackoverflow.com/a/66669838/21019325.
|
||||
The different methods provided are based on the methods outlined in the
|
||||
StackOverflow thread: https://stackoverflow.com/questions/596216/formula-to-determine-perceived-brightness-of-rgb-color
|
||||
}
|
||||
\examples{
|
||||
contrast_text(c("#F2F2F2", "blue"))
|
||||
|
||||
contrast_text(c("#F2F2F2", "blue"), method="relative")
|
||||
}
|
44
man/ds2dd.Rd
44
man/ds2dd.Rd
@ -1,44 +0,0 @@
|
||||
% Generated by roxygen2: do not edit by hand
|
||||
% Please edit documentation in R/ds2dd.R
|
||||
\name{ds2dd}
|
||||
\alias{ds2dd}
|
||||
\title{Data set to data dictionary function}
|
||||
\usage{
|
||||
ds2dd(
|
||||
ds,
|
||||
record.id = "record_id",
|
||||
form.name = "basis",
|
||||
field.type = "text",
|
||||
field.label = NULL,
|
||||
include.column.names = FALSE
|
||||
)
|
||||
}
|
||||
\arguments{
|
||||
\item{ds}{data set}
|
||||
|
||||
\item{record.id}{name or column number of id variable, moved to first row of
|
||||
data dictionary, character of integer. Default is "record_id".}
|
||||
|
||||
\item{form.name}{vector of form names, character string, length 1 or length
|
||||
equal to number of variables. Default is "basis".}
|
||||
|
||||
\item{field.type}{vector of field types, character string, length 1 or length
|
||||
equal to number of variables. Default is "text.}
|
||||
|
||||
\item{field.label}{vector of form names, character string, length 1 or length
|
||||
equal to number of variables. Default is NULL and is then identical to field
|
||||
names.}
|
||||
|
||||
\item{include.column.names}{Flag to give detailed output including new
|
||||
column names for original data set for upload.}
|
||||
}
|
||||
\value{
|
||||
data.frame or list of data.frame and vector
|
||||
}
|
||||
\description{
|
||||
Data set to data dictionary function
|
||||
}
|
||||
\examples{
|
||||
talos$id <- seq_len(nrow(talos))
|
||||
ds2dd(talos, record.id="id",include.column.names=FALSE)
|
||||
}
|
@ -1,22 +0,0 @@
|
||||
% Generated by roxygen2: do not edit by hand
|
||||
% Please edit documentation in R/metadata.R
|
||||
\docType{data}
|
||||
\name{metadata_names}
|
||||
\alias{metadata_names}
|
||||
\title{Vector of REDCap metadata headers}
|
||||
\format{
|
||||
Vector of length 18 with REDCap metadata headers:
|
||||
\describe{
|
||||
\item{metadata_names}{characterstrings}
|
||||
}
|
||||
}
|
||||
\usage{
|
||||
data(metadata_names)
|
||||
}
|
||||
\description{
|
||||
Vector of REDCap metadata headers
|
||||
}
|
||||
\seealso{
|
||||
\url{https://www.project-redcap.org/}
|
||||
}
|
||||
\keyword{datasets}
|
@ -1,10 +0,0 @@
|
||||
# Unit test for contrast_text()
|
||||
|
||||
library(testthat)
|
||||
|
||||
test_that("contrast_text() returns the correct text color", {
|
||||
expect_equal(contrast_text("#FFFFFF"), "black")
|
||||
expect_equal(contrast_text("#000000"), "white")
|
||||
expect_equal(contrast_text("#FFFFFF", light_text="blue", dark_text="green"), "green")
|
||||
expect_equal(contrast_text("#000000", light_text="blue", dark_text="green"), "blue")
|
||||
})
|
@ -1,28 +0,0 @@
|
||||
talos$id <- seq_len(nrow(talos))
|
||||
|
||||
test_that("ds2dd gives desired output", {
|
||||
expect_equal(ncol(ds2dd(talos, record.id="id")),18)
|
||||
expect_s3_class(ds2dd(talos, record.id="id"),"data.frame")
|
||||
expect_s3_class(ds2dd(talos,record.id = 7),"data.frame")
|
||||
})
|
||||
|
||||
test_that("ds2dd gives output with list of length two", {
|
||||
expect_equal(length(ds2dd(talos, record.id="id",include.column.names = TRUE)),2)
|
||||
})
|
||||
|
||||
|
||||
test_that("ds2dd gives correct errors", {
|
||||
expect_error(ds2dd(talos))
|
||||
expect_error(ds2dd(talos,form.name = c("basis","incl")))
|
||||
expect_error(ds2dd(talos,field.type = c("text","dropdown")))
|
||||
expect_error(ds2dd(talos,field.label = c("Name","Age")))
|
||||
})
|
||||
|
||||
|
||||
|
||||
colnames(talos) <- c("rtreat", "mRS 1", "mRS 6", "hypertension", "diabetes", "civil", "id")
|
||||
|
||||
test_that("ds2dd correctly renames", {
|
||||
expect_equal(ncol(ds2dd(talos, record.id="id")),18)
|
||||
expect_s3_class(ds2dd(talos, record.id="id"),"data.frame")
|
||||
})
|
@ -1,87 +0,0 @@
|
||||
---
|
||||
title: "ds2dd"
|
||||
date: "`r Sys.Date()`"
|
||||
output: rmarkdown::html_vignette
|
||||
vignette: >
|
||||
%\VignetteIndexEntry{ds2dd}
|
||||
%\VignetteEngine{knitr::rmarkdown}
|
||||
%\VignetteEncoding{UTF-8}
|
||||
---
|
||||
|
||||
```{r, include = FALSE}
|
||||
knitr::opts_chunk$set(
|
||||
collapse = TRUE,
|
||||
comment = "#>"
|
||||
)
|
||||
```
|
||||
|
||||
```{r setup}
|
||||
library(stRoke)
|
||||
```
|
||||
|
||||
# Easy data set to data base workflow
|
||||
|
||||
This function can be used as a simple tool for creating at data base metadata file for REDCap (called a DataDictionary) based on a given data set file.
|
||||
|
||||
## Step 1 - Load your data set
|
||||
|
||||
Here we'll use the sample TALOS dataset included with the package.
|
||||
|
||||
```{r}
|
||||
data("talos")
|
||||
ds <- talos
|
||||
# As the data set lacks an ID column, one is added
|
||||
ds$id <- seq_len(nrow(ds))
|
||||
```
|
||||
|
||||
## Step 2 - Create the DataDictionary
|
||||
|
||||
```{r}
|
||||
datadictionary <- ds2dd(ds,record.id = "id",include.column.names = TRUE)
|
||||
```
|
||||
|
||||
Now additional specifications to the DataDictionary can be made manually, or it can be uploaded and modified manually in the graphical user interface on the web page.
|
||||
|
||||
The function will transform column names to lower case and substitute spaces for underscores. The output is a list with the DataDictionary and a vector of new column names for the dataset to fit the meta data.
|
||||
|
||||
## Step 3 - Meta data upload
|
||||
|
||||
Now the DataDictionary can be exported as a spreadsheet and uploaded or it can be uploaded using the `REDCapR` package (only projects with "Development" status).
|
||||
|
||||
Use one of the two approaches below:
|
||||
|
||||
### Manual upload
|
||||
|
||||
```{r eval=FALSE}
|
||||
write.csv(datadictionary$DataDictionary,"datadictionary.csv")
|
||||
```
|
||||
|
||||
### Upload with `REDCapR`
|
||||
|
||||
```{r eval=FALSE}
|
||||
REDCapR::redcap_metadata_write(
|
||||
datadictionary$DataDictionary,
|
||||
redcap_uri = keyring::key_get("DB_URI"),
|
||||
token = keyring::key_get("DB_TOKEN")
|
||||
)
|
||||
```
|
||||
|
||||
In the ["REDCap R Handbook"](https://agdamsbo.github.io/redcap-r-handbook/) more is written on interfacing with REDCap in R using the `library(keyring)`to store credentials in [chapter 1.1](https://agdamsbo.github.io/redcap-r-handbook/access.html#sec-getting-access).
|
||||
|
||||
## Step 4 - Data upload
|
||||
|
||||
The same two options are available for data upload as meta data upload: manual og through `REDCapR`.
|
||||
|
||||
Only the latter is shown here.
|
||||
|
||||
```{r eval=FALSE}
|
||||
# new column nams are applied
|
||||
colnames(ds) <- datadictionary$`Column names`
|
||||
|
||||
REDCapR::redcap_write(
|
||||
ds,
|
||||
redcap_uri = keyring::key_get("DB_URI"),
|
||||
token = keyring::key_get("DB_TOKEN")
|
||||
)
|
||||
```
|
||||
|
@ -1,6 +1,5 @@
|
||||
---
|
||||
title: "Toolbox"
|
||||
date: "`r Sys.Date()`"
|
||||
output: rmarkdown::html_vignette
|
||||
vignette: >
|
||||
%\VignetteIndexEntry{Toolbox}
|
||||
|
Loading…
Reference in New Issue
Block a user