see NEWS.md

This commit is contained in:
AG Damsbo 2023-01-20 21:10:35 +01:00
parent 09d59acf49
commit 294b756b92
8 changed files with 21 additions and 25 deletions

View File

@ -1,3 +1,3 @@
Version: 23.1.5 Version: 23.1.6
Date: 2023-01-12 13:45:40 UTC Date: 2023-01-18 10:24:32 UTC
SHA: 7c8b898eed02d293103c10ab59e40df4f2dd1296 SHA: 9a648c24e5d7baf883b8f56f3fe6d52cc8a4e428

View File

@ -4,15 +4,14 @@ Version: 23.1.7
Authors@R: Authors@R:
person("Andreas Gammelgaard", "Damsbo", , "agdamsbo@clin.au.dk", role = c("aut", "cre"), person("Andreas Gammelgaard", "Damsbo", , "agdamsbo@clin.au.dk", role = c("aut", "cre"),
comment = c(ORCID = "0000-0002-7559-1154")) comment = c(ORCID = "0000-0002-7559-1154"))
Author:
Kraglund et al (2018) <doi:10.1161/STROKEAHA.117.020067>,
Zou et al (2022) <doi:10.1161/STROKEAHA.121.037744>,
Becker (2020) <doi:10.18637/jss.v093.i02>
Description: This is an R-toolbox of custom functions for convenient data management Description: This is an R-toolbox of custom functions for convenient data management
and analysis in clinical health research and teaching. and analysis in clinical health research and teaching.
The package is mainly collected for personal use, but any use beyond that is encouraged. The package is mainly collected for personal use, but any use beyond that is encouraged.
This package has migrated functions from 'agdamsbo/daDoctoR', and new functions has been added. This package has migrated functions from 'agdamsbo/daDoctoR', and new functions has been added.
Versioning follows months and year. See NEWS.md for release notes. Version follows months and year. See NEWS/Changelog for release notes.
This package includes sampled data from the TALOS trial (Kraglund et al (2018) <doi:10.1161/STROKEAHA.117.020067>).
The 'win_prob()' function is based on work by Zou et al (2022) <doi:10.1161/STROKEAHA.121.037744>.
The 'age_calc()' function is based on work by Becker (2020) <doi:10.18637/jss.v093.i02>.
URL: https://agdamsbo.github.io/stRoke/, https://github.com/agdamsbo/stRoke URL: https://agdamsbo.github.io/stRoke/, https://github.com/agdamsbo/stRoke
BugReports: https://github.com/agdamsbo/stRoke/issues BugReports: https://github.com/agdamsbo/stRoke/issues
License: GPL-3 License: GPL-3

View File

@ -10,10 +10,8 @@
#' #'
#' @examples #' @examples
#' trunc(age_calc(as.Date("1945-10-23"),as.Date("2018-09-30"))) #' trunc(age_calc(as.Date("1945-10-23"),as.Date("2018-09-30")))
#' @references
#' A similar functionality is achievable
#' with \code{\link[lubridate]{time_length}}
#' #'
#' @references
#' Becker, J.P. (2020). eeptools: An R Package for Teaching and Learning #' Becker, J.P. (2020). eeptools: An R Package for Teaching and Learning
#' Ecology and Evolutionary Biology. Journal of Statistical Software, #' Ecology and Evolutionary Biology. Journal of Statistical Software,
#' 93(2), 1-27. #' 93(2), 1-27.

View File

@ -1,7 +1,9 @@
#' @title Calculates the probability of winning #' @title Calculates the probability of winning
#' @description Calculates the probability of winning (winP) #' @description Calculates the probability of winning (winP). In the referenced
#' article Zou et al (2022) proposes a method for calculating probability of
#' winning with a confidence interval an p-value testing.
#' @param data A data frame containing the response and group variable. #' @param data A data frame containing the response and group variable.
#' @param response The name of the response variable. #' @param response The name of the response variable.
#' Takes first column if empty. #' Takes first column if empty.
@ -13,7 +15,7 @@
#' @param sample.size Flag to include sample size calculation. Default is FALSE. #' @param sample.size Flag to include sample size calculation. Default is FALSE.
#' @param print.tables Flag to print cumulative tables. Default is FALSE. #' @param print.tables Flag to print cumulative tables. Default is FALSE.
#' @param dec Numeric for decimals to print. Default is 3. #' @param dec Numeric for decimals to print. Default is 3.
#' @return A list containing the win_prob statistics. #' @return A list containing the win_prob statistics.
#' @export #' @export
#' @importFrom stats pnorm qnorm xtabs #' @importFrom stats pnorm qnorm xtabs
#' @source \doi{10.1161/STROKEAHA.121.037744} #' @source \doi{10.1161/STROKEAHA.121.037744}

View File

@ -1,14 +1,14 @@
Andreas Andreas
Changelog
DDMMYY DDMMYY
DOI DOI
Gammelgaard Gammelgaard
Github Github
Kraglund
NA's NA's
OLR OLR
ORCID ORCID
OpenAI's OpenAI's
REDCap
REDCapR
REDCapRITS REDCapRITS
RStudio RStudio
Randomisation Randomisation
@ -18,10 +18,8 @@ TALOS
Vectorised Vectorised
XXXX XXXX
Zou Zou
advices
agdamsbo agdamsbo
al al
analysing
annonymized annonymized
bstfun bstfun
calc calc
@ -38,6 +36,7 @@ ddmmyy
ddmmyyxxxx ddmmyyxxxx
difftime difftime
dk dk
doi
eeptools eeptools
eg eg
et et
@ -52,15 +51,13 @@ grotta
grottaBar grottaBar
gtsummary gtsummary
inteRgrate inteRgrate
jss
lm lm
lst lst
mRS mRS
md
neuRo
olr olr
recognised recognised
sapply sapply
uri
vapply vapply
vec vec
winP winP

View File

@ -27,11 +27,9 @@ Calculate age in years, months, or days
} }
\examples{ \examples{
trunc(age_calc(as.Date("1945-10-23"),as.Date("2018-09-30"))) trunc(age_calc(as.Date("1945-10-23"),as.Date("2018-09-30")))
} }
\references{ \references{
A similar functionality is achievable
with \code{\link[lubridate]{time_length}}
Becker, J.P. (2020). eeptools: An R Package for Teaching and Learning Becker, J.P. (2020). eeptools: An R Package for Teaching and Learning
Ecology and Evolutionary Biology. Journal of Statistical Software, Ecology and Evolutionary Biology. Journal of Statistical Software,
93(2), 1-27. 93(2), 1-27.

View File

@ -6,7 +6,7 @@
\alias{stRoke-package} \alias{stRoke-package}
\title{stRoke: Clinical Stroke Research} \title{stRoke: Clinical Stroke Research}
\description{ \description{
This is an R-toolbox of custom functions for convenient data management and analysis in clinical health research and teaching. The package is mainly collected for personal use, but any use beyond that is encouraged. This package has migrated functions from 'agdamsbo/daDoctoR', and new functions has been added. Versioning follows months and year. See NEWS.md for release notes. This is an R-toolbox of custom functions for convenient data management and analysis in clinical health research and teaching. The package is mainly collected for personal use, but any use beyond that is encouraged. This package has migrated functions from 'agdamsbo/daDoctoR', and new functions has been added. Version follows months and year. See NEWS/Changelog for release notes. This package includes sampled data from the TALOS trial (Kraglund et al (2018) \doi{10.1161/STROKEAHA.117.020067}). The 'win_prob()' function is based on work by Zou et al (2022) \doi{10.1161/STROKEAHA.121.037744}. The 'age_calc()' function is based on work by Becker (2020) \doi{10.18637/jss.v093.i02}.
} }
\seealso{ \seealso{
Useful links: Useful links:

View File

@ -44,7 +44,9 @@ Takes second column if empty.}
A list containing the win_prob statistics. A list containing the win_prob statistics.
} }
\description{ \description{
Calculates the probability of winning (winP) Calculates the probability of winning (winP). In the referenced
article Zou et al (2022) proposes a method for calculating probability of
winning with a confidence interval an p-value testing.
} }
\examples{ \examples{
win_prob(data=stRoke::talos,response="mrs_6",group="rtreat") win_prob(data=stRoke::talos,response="mrs_6",group="rtreat")