mirror of
https://github.com/agdamsbo/stRoke.git
synced 2024-11-23 05:20:22 +01:00
118 lines
7.5 KiB
HTML
118 lines
7.5 KiB
HTML
|
<!DOCTYPE html>
|
||
|
|
<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><meta name="description" content="Heavily inspired by https://www.r-bloggers.com/plotting-odds-ratios-aka-a-forrestplot-with-ggplot2/"><title>Forrest plot from ordinal logistic regression. — plot_ord_odds • stRoke</title><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.1.3/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.1.3/bootstrap.bundle.min.js"></script><!-- Font Awesome icons --><link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.12.1/css/all.min.css" integrity="sha256-mmgLkCYLUQbXn0B1SRqzHar6dCnv9oZFPEC1g1cwlkk=" crossorigin="anonymous"><link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.12.1/css/v4-shims.min.css" integrity="sha256-wZjR52fzng1pJHwx4aV2AO3yyTOXrcDW7jBpJtTwVxw=" crossorigin="anonymous"><!-- bootstrap-toc --><script src="https://cdn.rawgit.com/afeld/bootstrap-toc/v1.0.1/dist/bootstrap-toc.min.js"></script><!-- headroom.js --><script src="https://cdnjs.cloudflare.com/ajax/libs/headroom/0.11.0/headroom.min.js" integrity="sha256-AsUX4SJE1+yuDu5+mAVzJbuYNPHj/WroHuZ8Ir/CkE0=" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/headroom/0.11.0/jQuery.headroom.min.js" integrity="sha256-ZX/yNShbjqsohH1k95liqY9Gd8uOiE1S4vZc+9KQ1K4=" crossorigin="anonymous"></script><!-- clipboard.js --><script src="https://cdnjs.cloudflare.com/ajax/libs/clipboard.js/2.0.6/clipboard.min.js" integrity="sha256-inc5kl9MA1hkeYUt+EC3BhlIgyp/2jDIyBLS6k3UxPI=" crossorigin="anonymous"></script><!-- search --><script src="https://cdnjs.cloudflare.com/ajax/libs/fuse.js/6.4.6/fuse.js" integrity="sha512-zv6Ywkjyktsohkbp9bb45V6tEMoWhzFzXis+LrMehmJZZSys19Yxf1dopHx7WzIKxr5tK2dVcYmaCk2uqdjF4A==" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/autocomplete.js/0.38.0/autocomplete.jquery.min.js" integrity="sha512-GU9ayf+66Xx2TmpxqJpliWbT5PiGYxpaG8rfnBEk1LL8l1KGkRShhngwdXK1UgqhAzWpZHSiYPc09/NwDQIGyg==" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/mark.js/8.11.1/mark.min.js" integrity="sha512-5CYOlHXGh6QpOFA/TeTylKLWfB3ftPsde7AnmhuitiTX4K5SqCLBeKro6sPS8ilsz1Q4NRx3v8Ko2IBiszzdww==" crossorigin="anonymous"></script><!-- pkgdown --><script src="../pkgdown.js"></script><meta property="og:title" content="Forrest plot from ordinal logistic regression. — plot_ord_odds"><meta property="og:description" content="Heavily inspired by https://www.r-bloggers.com/plotting-odds-ratios-aka-a-forrestplot-with-ggplot2/"><!-- mathjax --><script src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.5/MathJax.js" integrity="sha256-nvJJv9wWKEm88qvoQl9ekL2J+k/RWIsaSScxxlsrv8k=" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.5/config/TeX-AMS-MML_HTMLorMML.js" integrity="sha256-84DKXVJXs0/F8OTMzX4UR909+jtl4G7SPypPavF+GfA=" crossorigin="anonymous"></script><!--[if lt IE 9]>
|
||
|
|
<script src="https://oss.maxcdn.com/html5shiv/3.7.3/html5shiv.min.js"></script>
|
||
|
|
<script src="https://oss.maxcdn.com/respond/1.4.2/respond.min.js"></script>
|
||
|
|
<![endif]--></head><body>
|
||
|
|
<a href="#main" class="visually-hidden-focusable">Skip to contents</a>
|
||
|
|
|
||
|
|
|
||
|
|
<nav class="navbar fixed-top navbar-light navbar-expand-lg bg-light"><div class="container">
|
||
|
|
|
||
|
|
<a class="navbar-brand me-2" href="../index.html">stRoke</a>
|
||
|
|
|
||
|
|
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.22.9.2</small>
|
||
|
|
|
||
|
|
|
||
|
|
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||
|
|
<span class="navbar-toggler-icon"></span>
|
||
|
|
</button>
|
||
|
|
|
||
|
|
<div id="navbar" class="collapse navbar-collapse ms-3">
|
||
|
|
<ul class="navbar-nav me-auto"><li class="active nav-item">
|
||
|
|
<a class="nav-link" href="../reference/index.html">Reference</a>
|
||
|
|
</li>
|
||
|
|
</ul><form class="form-inline my-2 my-lg-0" role="search">
|
||
|
|
<input type="search" class="form-control me-sm-2" aria-label="Toggle navigation" name="search-input" data-search-index="../search.json" id="search-input" placeholder="Search for" autocomplete="off"></form>
|
||
|
|
|
||
|
|
<ul class="navbar-nav"></ul></div>
|
||
|
|
|
||
|
|
|
||
|
|
</div>
|
||
|
|
</nav><div class="container template-reference-topic">
|
||
|
|
<div class="row">
|
||
|
|
<main id="main" class="col-md-9"><div class="page-header">
|
||
|
|
<img src="" class="logo" alt=""><h1>Forrest plot from ordinal logistic regression.</h1>
|
||
|
|
|
||
|
|
<div class="d-none name"><code>plot_ord_odds.Rd</code></div>
|
||
|
|
</div>
|
||
|
|
|
||
|
|
<div class="ref-description section level2">
|
||
|
|
<p>Heavily inspired by https://www.r-bloggers.com/plotting-odds-ratios-aka-a-forrestplot-with-ggplot2/</p>
|
||
|
|
</div>
|
||
|
|
|
||
|
|
<div class="section level2">
|
||
|
|
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
|
||
|
|
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">plot_ord_odds</span><span class="op">(</span></span>
|
||
|
|
<span> <span class="va">x</span>,</span>
|
||
|
|
<span> title <span class="op">=</span> <span class="cn">NULL</span>,</span>
|
||
|
|
<span> dec <span class="op">=</span> <span class="fl">3</span>,</span>
|
||
|
|
<span> lbls <span class="op">=</span> <span class="cn">NULL</span>,</span>
|
||
|
|
<span> hori <span class="op">=</span> <span class="st">"OR (95 % CI)"</span>,</span>
|
||
|
|
<span> vert <span class="op">=</span> <span class="st">"Variables"</span>,</span>
|
||
|
|
<span> short <span class="op">=</span> <span class="cn">FALSE</span>,</span>
|
||
|
|
<span> input <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"model"</span>, <span class="st">"df"</span><span class="op">)</span></span>
|
||
|
|
<span><span class="op">)</span></span></code></pre></div>
|
||
|
|
</div>
|
||
|
|
|
||
|
|
<div class="section level2">
|
||
|
|
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
|
||
|
|
<dl><dt>x</dt>
|
||
|
|
<dd><p>input data.</p></dd>
|
||
|
|
|
||
|
|
|
||
|
|
<dt>title</dt>
|
||
|
|
<dd><p>plot title</p></dd>
|
||
|
|
|
||
|
|
|
||
|
|
<dt>dec</dt>
|
||
|
|
<dd><p>decimals for labels</p></dd>
|
||
|
|
|
||
|
|
|
||
|
|
<dt>lbls</dt>
|
||
|
|
<dd><p>labels for variable names. Carefull, as the right order is not checked automatically!</p></dd>
|
||
|
|
|
||
|
|
|
||
|
|
<dt>hori</dt>
|
||
|
|
<dd><p>labels the horizontal axis (this i the y axis as the plot is rotated)</p></dd>
|
||
|
|
|
||
|
|
|
||
|
|
<dt>vert</dt>
|
||
|
|
<dd><p>labels the horizontal axis (this i the x axis as the plot is rotated)</p></dd>
|
||
|
|
|
||
|
|
|
||
|
|
<dt>short</dt>
|
||
|
|
<dd><p>flag to half number of ticks on horizontal axis.</p></dd>
|
||
|
|
|
||
|
|
|
||
|
|
<dt>input</dt>
|
||
|
|
<dd><p>can be either "model", which is a olr model (polr()), or "df", which is a dataframe whith three columns for OR, lower CI and upper CI.</p></dd>
|
||
|
|
|
||
|
|
</dl></div>
|
||
|
|
<div class="section level2">
|
||
|
|
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
|
||
|
|
|
||
|
|
|
||
|
|
<p>gg object</p>
|
||
|
|
</div>
|
||
|
|
|
||
|
|
</main><aside class="col-md-3"><nav id="toc"><h2>On this page</h2>
|
||
|
|
</nav></aside></div>
|
||
|
|
|
||
|
|
|
||
|
|
<footer><div class="pkgdown-footer-left">
|
||
|
|
<p></p><p>Developed by Andreas Gammelgaard Damsbo.</p>
|
||
|
|
</div>
|
||
|
|
|
||
|
|
<div class="pkgdown-footer-right">
|
||
|
|
<p></p><p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.6.</p>
|
||
|
|
</div>
|
||
|
|
|
||
|
|
</footer></div>
|
||
|
|
|
||
|
|
|
||
|
|
|
||
|
|
|
||
|
|
|
||
|
|
</body></html>
|
||
|
|
|