mirror of
https://github.com/agdamsbo/daDoctoR.git
synced 2024-10-29 18:21:53 +01:00
39 lines
1.2 KiB
R
39 lines
1.2 KiB
R
#' A repeated function for bivariate analyses
|
|
#'
|
|
#' For bivariate analyses, for gating by p-value or change-in-estimate.
|
|
#' @param y Effect meassure.
|
|
#' @param v1 Main variable in model
|
|
#' @param string String of columnnames to include. Obtained with dput(). Input as c().
|
|
#' @param data dataframe of data to analyse
|
|
#' @param method method of gating analysis. Can be "pval" for a simple analysis of p-values below or equal to 0.1 or "cie" for change in estimate to asses the change of the estimate when a second variable is added to the model.
|
|
#' @param logistic flag for logistic binomial regression or not (linear is then selected).
|
|
#' @keywords logistic regression
|
|
#' @export
|
|
#' @examples
|
|
#' rep_biv()
|
|
|
|
rep_biv<-function(y,v1,string,data,method="pval",logistic=FALSE,ci=FALSE,cut=0.1,v2=NULL,v3=NULL){
|
|
|
|
require(daDoctoR)
|
|
|
|
a<-y
|
|
b<-v1
|
|
s<-string
|
|
dat<-data
|
|
me<-method
|
|
log<-logistic
|
|
CI<-ci
|
|
ct<-cut
|
|
|
|
if (me=="pval"&log==FALSE){
|
|
daDoctoR::rep_lm(y=a,v1=b,string=s,data=dat,ci=CI)
|
|
}
|
|
if (me=="pval"&log==TRUE){
|
|
daDoctoR::rep_lm(y=a,v1=b,string=s,data=dat,ci=CI)
|
|
}
|
|
if (method=="cie"){
|
|
daDoctoR::cie_test(y=a,v1=b,string=s,data=dat,logistic=log,cut=ct)
|
|
}
|
|
return(df)
|
|
}
|