mirror of
https://github.com/agdamsbo/daDoctoR.git
synced 2024-11-27 22:11:54 +01:00
98 lines
2.7 KiB
R
98 lines
2.7 KiB
R
#'
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#' This is a Shiny web application. You can run the application by clicking
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#' the 'Run App' button above.
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#'
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#' Find out more about building applications with Shiny here:
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#'
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#' http://shiny.rstudio.com/
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#'
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#'
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#' User requests:
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#'
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#' - Proper labelling of chart
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library(shiny)
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library(ggplot2)
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source("https://raw.githubusercontent.com/agdamsbo/daDoctoR/master/R/hwe_geno.R")
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ui <- fluidPage(
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# Application title
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titlePanel("Chi square test of HWE for bi- or triallelic systems"),
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sidebarLayout(
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sidebarPanel(
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# Input: Numeric entry for number of alleles ----
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radioButtons(inputId = "ale",
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label = "Number of alleles:",
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inline = FALSE,
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choiceNames=c("Two alleles (M, N)",
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"Three alleles (M, N, O)"),
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choiceValues=c(2,3)),
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h4("Observed genotype distribution"),
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numericInput(inputId = "mm",
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label = "MM:",
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value=NA),
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numericInput(inputId = "mn",
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label = "MN:",
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value=NA),
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numericInput(inputId = "nn",
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label = "NN:",
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value=NA),
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conditionalPanel(condition = "input.ale==3",
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numericInput(inputId = "mo",
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label = "MO:",
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value=NA),
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numericInput(inputId = "no",
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label = "NO:",
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value=NA),
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numericInput(inputId = "oo",
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label = "OO:",
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value=NA))
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),
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mainPanel(
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tabsetPanel(
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tabPanel("Summary",
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h3(textOutput("obs.dist", container = span)),
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htmlOutput("obs.tbl", container = span),
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h3(textOutput("exp.dist", container = span)),
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htmlOutput("exp.tbl", container = span),
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h3(textOutput("allele.dist", container = span)),
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htmlOutput("allele.tbl", container = span),
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value=1),
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tabPanel("Calculations",
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h3(textOutput("chi", container = span)),
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htmlOutput("chi.val", container = span),
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h3(textOutput("p", container = span)),
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htmlOutput("p.val", container = span),
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value=2),
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tabPanel("Plots",
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h3(textOutput("geno.pie.ttl", container = span)),
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plotOutput("geno.pie.plt"),
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value=3),
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selected= 2, type = "tabs")
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)
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)
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)
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