#' Summarising function of HWE calculation #' #' For easy printing. #' @param a1 Allele 1. #' @param a2 Allele 2. #' @param f factor for grouping. #' @keywords hardy-weinberg-equllibrium #' @export #' @examples #' hwe_sum() hwe_sum<-function(a1,a2,f){ ## HWE summarising function, for several groups defined by factor f. Alleles are provided as vectors, a1 and a2. source("https://raw.githubusercontent.com/agdamsbo/research/master/hwe_allele.R") lst<-list() df<-data.frame(cbind(a1,a2)) for (i in 1:length(ls<-split(df,f))){ grp<-names(ls)[i] obs<-data.frame(hwe_allele(ls[[i]][,1],ls[[i]][,2])[[c("observed.dist")]]) pval<-round(hwe_allele(ls[[i]][,1],ls[[i]][,2])[[c("p.value")]],3) prnt<-paste0(obs[1,]," (",obs[2,],")") names(prnt)<-names(obs) lst<-list(lst,grp,obs.dist=obs,print=prnt,hwe.pv=pval) } return(lst) }