mirror of
https://github.com/agdamsbo/REDCapCAST.git
synced 2024-11-22 13:30:23 +01:00
47 lines
1.2 KiB
R
47 lines
1.2 KiB
R
test_that("redcap_wider() returns expected output", {
|
|
list <-
|
|
list(
|
|
data.frame(
|
|
record_id = c(1, 2, 1, 2),
|
|
redcap_event_name = c("baseline", "baseline", "followup", "followup"),
|
|
age = c(25, 26, 27, 28)
|
|
),
|
|
data.frame(
|
|
record_id = c(1, 2),
|
|
redcap_event_name = c("baseline", "baseline"),
|
|
gender = c("male", "female")
|
|
)
|
|
)
|
|
|
|
expect_equal(
|
|
redcap_wider(list),
|
|
data.frame(
|
|
record_id = c(1, 2),
|
|
age_baseline = c(25, 26),
|
|
age_followup = c(27, 28),
|
|
gender = c("male", "female")
|
|
)
|
|
)
|
|
})
|
|
|
|
|
|
# Using test data
|
|
|
|
# Set up the path and data -------------------------------------------------
|
|
file_paths <- lapply(
|
|
c(records = "WARRIORtestForSoftwa_DATA_2018-06-21_1431.csv",
|
|
metadata = "WARRIORtestForSoftwareUpgrades_DataDictionary_2018-06-21.csv"),
|
|
get_data_location
|
|
)
|
|
|
|
redcap <- lapply(file_paths, read.csv, stringsAsFactors = FALSE)
|
|
redcap[["metadata"]] <- with(redcap, metadata[metadata[, 1] > "", ])
|
|
list <-
|
|
with(redcap, REDCap_split(records, metadata, forms = "all"))
|
|
|
|
wide_ds <- redcap_wider(list)
|
|
|
|
test_that("redcap_wider() returns wide output from CSV", {
|
|
expect_equal(ncol(wide_ds), 171)
|
|
})
|