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<img src="../logo.png" class="logo" alt=""><h1>Introduction</h1>
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<small class="dont-index">Source: <a href="https://github.com/agdamsbo/REDCapCAST/blob/main/vignettes/Introduction.Rmd" class="external-link"><code>vignettes/Introduction.Rmd</code></a></small>
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<div class="d-none name"><code>Introduction.Rmd</code></div>
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<div class="sourceCode" id="cb1"><pre class="downlit sourceCode r">
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<code class="sourceCode R"><span><span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va"><a href="https://github.com/agdamsbo/REDCapCAST" class="external-link">REDCapCAST</a></span><span class="op">)</span></span></code></pre></div>
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<p>This vignette covers the included functions and basic
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functionality.</p>
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<p>A dataset and a meta data file are provided with the package for
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demonstration of the functions.</p>
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<div class="section level2">
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<h2 id="splitting-the-dataset">Splitting the dataset<a class="anchor" aria-label="anchor" href="#splitting-the-dataset"></a>
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</h2>
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<div class="sourceCode" id="cb2"><pre class="downlit sourceCode r">
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<code class="sourceCode R"><span><span class="va">redcapcast_data</span> <span class="op">|></span> <span class="fu">gt</span><span class="fu">::</span><span class="fu"><a href="https://gt.rstudio.com/reference/gt.html" class="external-link">gt</a></span><span class="op">(</span><span class="op">)</span></span></code></pre></div>
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||
border-right-color: #D3D3D3;
|
||
}
|
||
|
||
#mwlefoodfi .gt_sourcenote {
|
||
font-size: 90%;
|
||
padding-top: 4px;
|
||
padding-bottom: 4px;
|
||
padding-left: 5px;
|
||
padding-right: 5px;
|
||
}
|
||
|
||
#mwlefoodfi .gt_left {
|
||
text-align: left;
|
||
}
|
||
|
||
#mwlefoodfi .gt_center {
|
||
text-align: center;
|
||
}
|
||
|
||
#mwlefoodfi .gt_right {
|
||
text-align: right;
|
||
font-variant-numeric: tabular-nums;
|
||
}
|
||
|
||
#mwlefoodfi .gt_font_normal {
|
||
font-weight: normal;
|
||
}
|
||
|
||
#mwlefoodfi .gt_font_bold {
|
||
font-weight: bold;
|
||
}
|
||
|
||
#mwlefoodfi .gt_font_italic {
|
||
font-style: italic;
|
||
}
|
||
|
||
#mwlefoodfi .gt_super {
|
||
font-size: 65%;
|
||
}
|
||
|
||
#mwlefoodfi .gt_footnote_marks {
|
||
font-size: 75%;
|
||
vertical-align: 0.4em;
|
||
position: initial;
|
||
}
|
||
|
||
#mwlefoodfi .gt_asterisk {
|
||
font-size: 100%;
|
||
vertical-align: 0;
|
||
}
|
||
|
||
#mwlefoodfi .gt_indent_1 {
|
||
text-indent: 5px;
|
||
}
|
||
|
||
#mwlefoodfi .gt_indent_2 {
|
||
text-indent: 10px;
|
||
}
|
||
|
||
#mwlefoodfi .gt_indent_3 {
|
||
text-indent: 15px;
|
||
}
|
||
|
||
#mwlefoodfi .gt_indent_4 {
|
||
text-indent: 20px;
|
||
}
|
||
|
||
#mwlefoodfi .gt_indent_5 {
|
||
text-indent: 25px;
|
||
}
|
||
|
||
#mwlefoodfi .katex-display {
|
||
display: inline-flex !important;
|
||
margin-bottom: 0.75em !important;
|
||
}
|
||
|
||
#mwlefoodfi div.Reactable > div.rt-table > div.rt-thead > div.rt-tr.rt-tr-group-header > div.rt-th-group:after {
|
||
height: 0px !important;
|
||
}
|
||
</style>
|
||
<table class="table gt_table" data-quarto-disable-processing="false" data-quarto-bootstrap="false">
|
||
<thead><tr class="gt_col_headings">
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_right" rowspan="1" colspan="1" scope="col" id="record_id">record_id</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="redcap_event_name">redcap_event_name</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="redcap_repeat_instrument">redcap_repeat_instrument</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_right" rowspan="1" colspan="1" scope="col" id="redcap_repeat_instance">redcap_repeat_instance</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="cpr">cpr</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_right" rowspan="1" colspan="1" scope="col" id="inclusion">inclusion</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_center" rowspan="1" colspan="1" scope="col" id="inclusion_time">inclusion_time</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_right" rowspan="1" colspan="1" scope="col" id="dob">dob</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_right" rowspan="1" colspan="1" scope="col" id="age">age</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_right" rowspan="1" colspan="1" scope="col" id="age_integer">age_integer</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="sex">sex</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="cohabitation">cohabitation</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="hypertension">hypertension</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="diabetes">diabetes</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="region">region</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="baseline_data_start_complete">baseline_data_start_complete</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="mrs_assessed">mrs_assessed</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_right" rowspan="1" colspan="1" scope="col" id="mrs_date">mrs_date</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_right" rowspan="1" colspan="1" scope="col" id="mrs_score">mrs_score</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="mrs_complete">mrs_complete</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_right" rowspan="1" colspan="1" scope="col" id="event_datetime">event_datetime</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_center" rowspan="1" colspan="1" scope="col" id="event_age">event_age</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="event_type">event_type</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="new_event_complete">new_event_complete</th>
|
||
</tr></thead>
|
||
<tbody class="gt_table_body">
|
||
<tr>
|
||
<td headers="record_id" class="gt_row gt_right">1</td>
|
||
<td headers="redcap_event_name" class="gt_row gt_left">inclusion</td>
|
||
<td headers="redcap_repeat_instrument" class="gt_row gt_left">NA</td>
|
||
<td headers="redcap_repeat_instance" class="gt_row gt_right">NA</td>
|
||
<td headers="cpr" class="gt_row gt_left">1203401OB4</td>
|
||
<td headers="inclusion" class="gt_row gt_right">2023-03-13</td>
|
||
<td headers="inclusion_time" class="gt_row gt_center">12:38:49</td>
|
||
<td headers="dob" class="gt_row gt_right">1940-03-12</td>
|
||
<td headers="age" class="gt_row gt_right">83.00239</td>
|
||
<td headers="age_integer" class="gt_row gt_right">83</td>
|
||
<td headers="sex" class="gt_row gt_left">female</td>
|
||
<td headers="cohabitation" class="gt_row gt_left">Yes</td>
|
||
<td headers="hypertension" class="gt_row gt_left">No</td>
|
||
<td headers="diabetes" class="gt_row gt_left">Yes</td>
|
||
<td headers="region" class="gt_row gt_left">East</td>
|
||
<td headers="baseline_data_start_complete" class="gt_row gt_left">Incomplete</td>
|
||
<td headers="mrs_assessed" class="gt_row gt_left">Yes</td>
|
||
<td headers="mrs_date" class="gt_row gt_right">2023-03-13</td>
|
||
<td headers="mrs_score" class="gt_row gt_right">1</td>
|
||
<td headers="mrs_complete" class="gt_row gt_left">Incomplete</td>
|
||
<td headers="event_datetime" class="gt_row gt_right">NA</td>
|
||
<td headers="event_age" class="gt_row gt_center">NA</td>
|
||
<td headers="event_type" class="gt_row gt_left">NA</td>
|
||
<td headers="new_event_complete" class="gt_row gt_left">NA</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="record_id" class="gt_row gt_right">2</td>
|
||
<td headers="redcap_event_name" class="gt_row gt_left">inclusion</td>
|
||
<td headers="redcap_repeat_instrument" class="gt_row gt_left">NA</td>
|
||
<td headers="redcap_repeat_instance" class="gt_row gt_right">NA</td>
|
||
<td headers="cpr" class="gt_row gt_left">0102342303</td>
|
||
<td headers="inclusion" class="gt_row gt_right">2023-03-01</td>
|
||
<td headers="inclusion_time" class="gt_row gt_center">10:38:57</td>
|
||
<td headers="dob" class="gt_row gt_right">1934-02-01</td>
|
||
<td headers="age" class="gt_row gt_right">89.07780</td>
|
||
<td headers="age_integer" class="gt_row gt_right">89</td>
|
||
<td headers="sex" class="gt_row gt_left">male</td>
|
||
<td headers="cohabitation" class="gt_row gt_left">Yes</td>
|
||
<td headers="hypertension" class="gt_row gt_left">No</td>
|
||
<td headers="diabetes" class="gt_row gt_left">No</td>
|
||
<td headers="region" class="gt_row gt_left">South</td>
|
||
<td headers="baseline_data_start_complete" class="gt_row gt_left">Incomplete</td>
|
||
<td headers="mrs_assessed" class="gt_row gt_left">Yes</td>
|
||
<td headers="mrs_date" class="gt_row gt_right">2023-03-07</td>
|
||
<td headers="mrs_score" class="gt_row gt_right">1</td>
|
||
<td headers="mrs_complete" class="gt_row gt_left">Incomplete</td>
|
||
<td headers="event_datetime" class="gt_row gt_right">NA</td>
|
||
<td headers="event_age" class="gt_row gt_center">NA</td>
|
||
<td headers="event_type" class="gt_row gt_left">NA</td>
|
||
<td headers="new_event_complete" class="gt_row gt_left">NA</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="record_id" class="gt_row gt_right">2</td>
|
||
<td headers="redcap_event_name" class="gt_row gt_left">follow1</td>
|
||
<td headers="redcap_repeat_instrument" class="gt_row gt_left">NA</td>
|
||
<td headers="redcap_repeat_instance" class="gt_row gt_right">NA</td>
|
||
<td headers="cpr" class="gt_row gt_left">NA</td>
|
||
<td headers="inclusion" class="gt_row gt_right">NA</td>
|
||
<td headers="inclusion_time" class="gt_row gt_center">NA</td>
|
||
<td headers="dob" class="gt_row gt_right">NA</td>
|
||
<td headers="age" class="gt_row gt_right">NA</td>
|
||
<td headers="age_integer" class="gt_row gt_right">NA</td>
|
||
<td headers="sex" class="gt_row gt_left">NA</td>
|
||
<td headers="cohabitation" class="gt_row gt_left">NA</td>
|
||
<td headers="hypertension" class="gt_row gt_left">NA</td>
|
||
<td headers="diabetes" class="gt_row gt_left">NA</td>
|
||
<td headers="region" class="gt_row gt_left">NA</td>
|
||
<td headers="baseline_data_start_complete" class="gt_row gt_left">NA</td>
|
||
<td headers="mrs_assessed" class="gt_row gt_left">Yes</td>
|
||
<td headers="mrs_date" class="gt_row gt_right">2023-03-09</td>
|
||
<td headers="mrs_score" class="gt_row gt_right">3</td>
|
||
<td headers="mrs_complete" class="gt_row gt_left">Incomplete</td>
|
||
<td headers="event_datetime" class="gt_row gt_right">NA</td>
|
||
<td headers="event_age" class="gt_row gt_center">NA</td>
|
||
<td headers="event_type" class="gt_row gt_left">NA</td>
|
||
<td headers="new_event_complete" class="gt_row gt_left">NA</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="record_id" class="gt_row gt_right">2</td>
|
||
<td headers="redcap_event_name" class="gt_row gt_left">follow1</td>
|
||
<td headers="redcap_repeat_instrument" class="gt_row gt_left">New Event (?)</td>
|
||
<td headers="redcap_repeat_instance" class="gt_row gt_right">1</td>
|
||
<td headers="cpr" class="gt_row gt_left">NA</td>
|
||
<td headers="inclusion" class="gt_row gt_right">NA</td>
|
||
<td headers="inclusion_time" class="gt_row gt_center">NA</td>
|
||
<td headers="dob" class="gt_row gt_right">NA</td>
|
||
<td headers="age" class="gt_row gt_right">NA</td>
|
||
<td headers="age_integer" class="gt_row gt_right">NA</td>
|
||
<td headers="sex" class="gt_row gt_left">NA</td>
|
||
<td headers="cohabitation" class="gt_row gt_left">NA</td>
|
||
<td headers="hypertension" class="gt_row gt_left">NA</td>
|
||
<td headers="diabetes" class="gt_row gt_left">NA</td>
|
||
<td headers="region" class="gt_row gt_left">NA</td>
|
||
<td headers="baseline_data_start_complete" class="gt_row gt_left">NA</td>
|
||
<td headers="mrs_assessed" class="gt_row gt_left">NA</td>
|
||
<td headers="mrs_date" class="gt_row gt_right">NA</td>
|
||
<td headers="mrs_score" class="gt_row gt_right">NA</td>
|
||
<td headers="mrs_complete" class="gt_row gt_left">NA</td>
|
||
<td headers="event_datetime" class="gt_row gt_right">2024-01-18 12:49:42</td>
|
||
<td headers="event_age" class="gt_row gt_center">NA</td>
|
||
<td headers="event_type" class="gt_row gt_left">TIA</td>
|
||
<td headers="new_event_complete" class="gt_row gt_left">Incomplete</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="record_id" class="gt_row gt_right">3</td>
|
||
<td headers="redcap_event_name" class="gt_row gt_left">inclusion</td>
|
||
<td headers="redcap_repeat_instrument" class="gt_row gt_left">NA</td>
|
||
<td headers="redcap_repeat_instance" class="gt_row gt_right">NA</td>
|
||
<td headers="cpr" class="gt_row gt_left">2301569823</td>
|
||
<td headers="inclusion" class="gt_row gt_right">2022-03-08</td>
|
||
<td headers="inclusion_time" class="gt_row gt_center">12:01:07</td>
|
||
<td headers="dob" class="gt_row gt_right">1956-01-23</td>
|
||
<td headers="age" class="gt_row gt_right">66.12319</td>
|
||
<td headers="age_integer" class="gt_row gt_right">66</td>
|
||
<td headers="sex" class="gt_row gt_left">male</td>
|
||
<td headers="cohabitation" class="gt_row gt_left">No</td>
|
||
<td headers="hypertension" class="gt_row gt_left">Yes</td>
|
||
<td headers="diabetes" class="gt_row gt_left">Yes</td>
|
||
<td headers="region" class="gt_row gt_left">North</td>
|
||
<td headers="baseline_data_start_complete" class="gt_row gt_left">Incomplete</td>
|
||
<td headers="mrs_assessed" class="gt_row gt_left">NA</td>
|
||
<td headers="mrs_date" class="gt_row gt_right">NA</td>
|
||
<td headers="mrs_score" class="gt_row gt_right">NA</td>
|
||
<td headers="mrs_complete" class="gt_row gt_left">Incomplete</td>
|
||
<td headers="event_datetime" class="gt_row gt_right">NA</td>
|
||
<td headers="event_age" class="gt_row gt_center">NA</td>
|
||
<td headers="event_type" class="gt_row gt_left">NA</td>
|
||
<td headers="new_event_complete" class="gt_row gt_left">NA</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="record_id" class="gt_row gt_right">3</td>
|
||
<td headers="redcap_event_name" class="gt_row gt_left">follow1</td>
|
||
<td headers="redcap_repeat_instrument" class="gt_row gt_left">NA</td>
|
||
<td headers="redcap_repeat_instance" class="gt_row gt_right">NA</td>
|
||
<td headers="cpr" class="gt_row gt_left">NA</td>
|
||
<td headers="inclusion" class="gt_row gt_right">NA</td>
|
||
<td headers="inclusion_time" class="gt_row gt_center">NA</td>
|
||
<td headers="dob" class="gt_row gt_right">NA</td>
|
||
<td headers="age" class="gt_row gt_right">NA</td>
|
||
<td headers="age_integer" class="gt_row gt_right">NA</td>
|
||
<td headers="sex" class="gt_row gt_left">NA</td>
|
||
<td headers="cohabitation" class="gt_row gt_left">NA</td>
|
||
<td headers="hypertension" class="gt_row gt_left">NA</td>
|
||
<td headers="diabetes" class="gt_row gt_left">NA</td>
|
||
<td headers="region" class="gt_row gt_left">NA</td>
|
||
<td headers="baseline_data_start_complete" class="gt_row gt_left">NA</td>
|
||
<td headers="mrs_assessed" class="gt_row gt_left">Yes</td>
|
||
<td headers="mrs_date" class="gt_row gt_right">2022-08-16</td>
|
||
<td headers="mrs_score" class="gt_row gt_right">2</td>
|
||
<td headers="mrs_complete" class="gt_row gt_left">Incomplete</td>
|
||
<td headers="event_datetime" class="gt_row gt_right">NA</td>
|
||
<td headers="event_age" class="gt_row gt_center">NA</td>
|
||
<td headers="event_type" class="gt_row gt_left">NA</td>
|
||
<td headers="new_event_complete" class="gt_row gt_left">NA</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="record_id" class="gt_row gt_right">3</td>
|
||
<td headers="redcap_event_name" class="gt_row gt_left">follow2</td>
|
||
<td headers="redcap_repeat_instrument" class="gt_row gt_left">NA</td>
|
||
<td headers="redcap_repeat_instance" class="gt_row gt_right">NA</td>
|
||
<td headers="cpr" class="gt_row gt_left">NA</td>
|
||
<td headers="inclusion" class="gt_row gt_right">NA</td>
|
||
<td headers="inclusion_time" class="gt_row gt_center">NA</td>
|
||
<td headers="dob" class="gt_row gt_right">NA</td>
|
||
<td headers="age" class="gt_row gt_right">NA</td>
|
||
<td headers="age_integer" class="gt_row gt_right">NA</td>
|
||
<td headers="sex" class="gt_row gt_left">NA</td>
|
||
<td headers="cohabitation" class="gt_row gt_left">NA</td>
|
||
<td headers="hypertension" class="gt_row gt_left">NA</td>
|
||
<td headers="diabetes" class="gt_row gt_left">NA</td>
|
||
<td headers="region" class="gt_row gt_left">NA</td>
|
||
<td headers="baseline_data_start_complete" class="gt_row gt_left">NA</td>
|
||
<td headers="mrs_assessed" class="gt_row gt_left">Yes</td>
|
||
<td headers="mrs_date" class="gt_row gt_right">2023-03-13</td>
|
||
<td headers="mrs_score" class="gt_row gt_right">1</td>
|
||
<td headers="mrs_complete" class="gt_row gt_left">Incomplete</td>
|
||
<td headers="event_datetime" class="gt_row gt_right">NA</td>
|
||
<td headers="event_age" class="gt_row gt_center">NA</td>
|
||
<td headers="event_type" class="gt_row gt_left">NA</td>
|
||
<td headers="new_event_complete" class="gt_row gt_left">NA</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="record_id" class="gt_row gt_right">3</td>
|
||
<td headers="redcap_event_name" class="gt_row gt_left">follow1</td>
|
||
<td headers="redcap_repeat_instrument" class="gt_row gt_left">New Event (?)</td>
|
||
<td headers="redcap_repeat_instance" class="gt_row gt_right">1</td>
|
||
<td headers="cpr" class="gt_row gt_left">NA</td>
|
||
<td headers="inclusion" class="gt_row gt_right">NA</td>
|
||
<td headers="inclusion_time" class="gt_row gt_center">NA</td>
|
||
<td headers="dob" class="gt_row gt_right">NA</td>
|
||
<td headers="age" class="gt_row gt_right">NA</td>
|
||
<td headers="age_integer" class="gt_row gt_right">NA</td>
|
||
<td headers="sex" class="gt_row gt_left">NA</td>
|
||
<td headers="cohabitation" class="gt_row gt_left">NA</td>
|
||
<td headers="hypertension" class="gt_row gt_left">NA</td>
|
||
<td headers="diabetes" class="gt_row gt_left">NA</td>
|
||
<td headers="region" class="gt_row gt_left">NA</td>
|
||
<td headers="baseline_data_start_complete" class="gt_row gt_left">NA</td>
|
||
<td headers="mrs_assessed" class="gt_row gt_left">NA</td>
|
||
<td headers="mrs_date" class="gt_row gt_right">NA</td>
|
||
<td headers="mrs_score" class="gt_row gt_right">NA</td>
|
||
<td headers="mrs_complete" class="gt_row gt_left">NA</td>
|
||
<td headers="event_datetime" class="gt_row gt_right">2024-01-18 12:49:58</td>
|
||
<td headers="event_age" class="gt_row gt_center">NA</td>
|
||
<td headers="event_type" class="gt_row gt_left">AIS</td>
|
||
<td headers="new_event_complete" class="gt_row gt_left">Incomplete</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="record_id" class="gt_row gt_right">3</td>
|
||
<td headers="redcap_event_name" class="gt_row gt_left">follow1</td>
|
||
<td headers="redcap_repeat_instrument" class="gt_row gt_left">New Event (?)</td>
|
||
<td headers="redcap_repeat_instance" class="gt_row gt_right">2</td>
|
||
<td headers="cpr" class="gt_row gt_left">NA</td>
|
||
<td headers="inclusion" class="gt_row gt_right">NA</td>
|
||
<td headers="inclusion_time" class="gt_row gt_center">NA</td>
|
||
<td headers="dob" class="gt_row gt_right">NA</td>
|
||
<td headers="age" class="gt_row gt_right">NA</td>
|
||
<td headers="age_integer" class="gt_row gt_right">NA</td>
|
||
<td headers="sex" class="gt_row gt_left">NA</td>
|
||
<td headers="cohabitation" class="gt_row gt_left">NA</td>
|
||
<td headers="hypertension" class="gt_row gt_left">NA</td>
|
||
<td headers="diabetes" class="gt_row gt_left">NA</td>
|
||
<td headers="region" class="gt_row gt_left">NA</td>
|
||
<td headers="baseline_data_start_complete" class="gt_row gt_left">NA</td>
|
||
<td headers="mrs_assessed" class="gt_row gt_left">NA</td>
|
||
<td headers="mrs_date" class="gt_row gt_right">NA</td>
|
||
<td headers="mrs_score" class="gt_row gt_right">NA</td>
|
||
<td headers="mrs_complete" class="gt_row gt_left">NA</td>
|
||
<td headers="event_datetime" class="gt_row gt_right">2024-01-18 12:50:01</td>
|
||
<td headers="event_age" class="gt_row gt_center">NA</td>
|
||
<td headers="event_type" class="gt_row gt_left">ICH</td>
|
||
<td headers="new_event_complete" class="gt_row gt_left">Incomplete</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="record_id" class="gt_row gt_right">3</td>
|
||
<td headers="redcap_event_name" class="gt_row gt_left">follow2</td>
|
||
<td headers="redcap_repeat_instrument" class="gt_row gt_left">New Event (?)</td>
|
||
<td headers="redcap_repeat_instance" class="gt_row gt_right">1</td>
|
||
<td headers="cpr" class="gt_row gt_left">NA</td>
|
||
<td headers="inclusion" class="gt_row gt_right">NA</td>
|
||
<td headers="inclusion_time" class="gt_row gt_center">NA</td>
|
||
<td headers="dob" class="gt_row gt_right">NA</td>
|
||
<td headers="age" class="gt_row gt_right">NA</td>
|
||
<td headers="age_integer" class="gt_row gt_right">NA</td>
|
||
<td headers="sex" class="gt_row gt_left">NA</td>
|
||
<td headers="cohabitation" class="gt_row gt_left">NA</td>
|
||
<td headers="hypertension" class="gt_row gt_left">NA</td>
|
||
<td headers="diabetes" class="gt_row gt_left">NA</td>
|
||
<td headers="region" class="gt_row gt_left">NA</td>
|
||
<td headers="baseline_data_start_complete" class="gt_row gt_left">NA</td>
|
||
<td headers="mrs_assessed" class="gt_row gt_left">NA</td>
|
||
<td headers="mrs_date" class="gt_row gt_right">NA</td>
|
||
<td headers="mrs_score" class="gt_row gt_right">NA</td>
|
||
<td headers="mrs_complete" class="gt_row gt_left">NA</td>
|
||
<td headers="event_datetime" class="gt_row gt_right">2024-01-18 12:50:05</td>
|
||
<td headers="event_age" class="gt_row gt_center">NA</td>
|
||
<td headers="event_type" class="gt_row gt_left">ICH</td>
|
||
<td headers="new_event_complete" class="gt_row gt_left">Incomplete</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="record_id" class="gt_row gt_right">3</td>
|
||
<td headers="redcap_event_name" class="gt_row gt_left">follow2</td>
|
||
<td headers="redcap_repeat_instrument" class="gt_row gt_left">New Event (?)</td>
|
||
<td headers="redcap_repeat_instance" class="gt_row gt_right">2</td>
|
||
<td headers="cpr" class="gt_row gt_left">NA</td>
|
||
<td headers="inclusion" class="gt_row gt_right">NA</td>
|
||
<td headers="inclusion_time" class="gt_row gt_center">NA</td>
|
||
<td headers="dob" class="gt_row gt_right">NA</td>
|
||
<td headers="age" class="gt_row gt_right">NA</td>
|
||
<td headers="age_integer" class="gt_row gt_right">NA</td>
|
||
<td headers="sex" class="gt_row gt_left">NA</td>
|
||
<td headers="cohabitation" class="gt_row gt_left">NA</td>
|
||
<td headers="hypertension" class="gt_row gt_left">NA</td>
|
||
<td headers="diabetes" class="gt_row gt_left">NA</td>
|
||
<td headers="region" class="gt_row gt_left">NA</td>
|
||
<td headers="baseline_data_start_complete" class="gt_row gt_left">NA</td>
|
||
<td headers="mrs_assessed" class="gt_row gt_left">NA</td>
|
||
<td headers="mrs_date" class="gt_row gt_right">NA</td>
|
||
<td headers="mrs_score" class="gt_row gt_right">NA</td>
|
||
<td headers="mrs_complete" class="gt_row gt_left">NA</td>
|
||
<td headers="event_datetime" class="gt_row gt_right">2024-01-18 12:50:07</td>
|
||
<td headers="event_age" class="gt_row gt_center">NA</td>
|
||
<td headers="event_type" class="gt_row gt_left">TIA</td>
|
||
<td headers="new_event_complete" class="gt_row gt_left">Incomplete</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="record_id" class="gt_row gt_right">3</td>
|
||
<td headers="redcap_event_name" class="gt_row gt_left">follow2</td>
|
||
<td headers="redcap_repeat_instrument" class="gt_row gt_left">New Event (?)</td>
|
||
<td headers="redcap_repeat_instance" class="gt_row gt_right">3</td>
|
||
<td headers="cpr" class="gt_row gt_left">NA</td>
|
||
<td headers="inclusion" class="gt_row gt_right">NA</td>
|
||
<td headers="inclusion_time" class="gt_row gt_center">NA</td>
|
||
<td headers="dob" class="gt_row gt_right">NA</td>
|
||
<td headers="age" class="gt_row gt_right">NA</td>
|
||
<td headers="age_integer" class="gt_row gt_right">NA</td>
|
||
<td headers="sex" class="gt_row gt_left">NA</td>
|
||
<td headers="cohabitation" class="gt_row gt_left">NA</td>
|
||
<td headers="hypertension" class="gt_row gt_left">NA</td>
|
||
<td headers="diabetes" class="gt_row gt_left">NA</td>
|
||
<td headers="region" class="gt_row gt_left">NA</td>
|
||
<td headers="baseline_data_start_complete" class="gt_row gt_left">NA</td>
|
||
<td headers="mrs_assessed" class="gt_row gt_left">NA</td>
|
||
<td headers="mrs_date" class="gt_row gt_right">NA</td>
|
||
<td headers="mrs_score" class="gt_row gt_right">NA</td>
|
||
<td headers="mrs_complete" class="gt_row gt_left">NA</td>
|
||
<td headers="event_datetime" class="gt_row gt_right">2024-01-18 12:50:09</td>
|
||
<td headers="event_age" class="gt_row gt_center">NA</td>
|
||
<td headers="event_type" class="gt_row gt_left">AIS</td>
|
||
<td headers="new_event_complete" class="gt_row gt_left">Incomplete</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="record_id" class="gt_row gt_right">4</td>
|
||
<td headers="redcap_event_name" class="gt_row gt_left">inclusion</td>
|
||
<td headers="redcap_repeat_instrument" class="gt_row gt_left">NA</td>
|
||
<td headers="redcap_repeat_instance" class="gt_row gt_right">NA</td>
|
||
<td headers="cpr" class="gt_row gt_left">0204051342</td>
|
||
<td headers="inclusion" class="gt_row gt_right">2023-03-14</td>
|
||
<td headers="inclusion_time" class="gt_row gt_center">20:39:19</td>
|
||
<td headers="dob" class="gt_row gt_right">1905-04-02</td>
|
||
<td headers="age" class="gt_row gt_right">117.94903</td>
|
||
<td headers="age_integer" class="gt_row gt_right">117</td>
|
||
<td headers="sex" class="gt_row gt_left">female</td>
|
||
<td headers="cohabitation" class="gt_row gt_left">NA</td>
|
||
<td headers="hypertension" class="gt_row gt_left">NA</td>
|
||
<td headers="diabetes" class="gt_row gt_left">NA</td>
|
||
<td headers="region" class="gt_row gt_left">NA</td>
|
||
<td headers="baseline_data_start_complete" class="gt_row gt_left">Incomplete</td>
|
||
<td headers="mrs_assessed" class="gt_row gt_left">NA</td>
|
||
<td headers="mrs_date" class="gt_row gt_right">NA</td>
|
||
<td headers="mrs_score" class="gt_row gt_right">NA</td>
|
||
<td headers="mrs_complete" class="gt_row gt_left">Incomplete</td>
|
||
<td headers="event_datetime" class="gt_row gt_right">NA</td>
|
||
<td headers="event_age" class="gt_row gt_center">NA</td>
|
||
<td headers="event_type" class="gt_row gt_left">NA</td>
|
||
<td headers="new_event_complete" class="gt_row gt_left">NA</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="record_id" class="gt_row gt_right">4</td>
|
||
<td headers="redcap_event_name" class="gt_row gt_left">follow2</td>
|
||
<td headers="redcap_repeat_instrument" class="gt_row gt_left">NA</td>
|
||
<td headers="redcap_repeat_instance" class="gt_row gt_right">NA</td>
|
||
<td headers="cpr" class="gt_row gt_left">NA</td>
|
||
<td headers="inclusion" class="gt_row gt_right">NA</td>
|
||
<td headers="inclusion_time" class="gt_row gt_center">NA</td>
|
||
<td headers="dob" class="gt_row gt_right">NA</td>
|
||
<td headers="age" class="gt_row gt_right">NA</td>
|
||
<td headers="age_integer" class="gt_row gt_right">NA</td>
|
||
<td headers="sex" class="gt_row gt_left">NA</td>
|
||
<td headers="cohabitation" class="gt_row gt_left">NA</td>
|
||
<td headers="hypertension" class="gt_row gt_left">NA</td>
|
||
<td headers="diabetes" class="gt_row gt_left">NA</td>
|
||
<td headers="region" class="gt_row gt_left">NA</td>
|
||
<td headers="baseline_data_start_complete" class="gt_row gt_left">NA</td>
|
||
<td headers="mrs_assessed" class="gt_row gt_left">NA</td>
|
||
<td headers="mrs_date" class="gt_row gt_right">NA</td>
|
||
<td headers="mrs_score" class="gt_row gt_right">NA</td>
|
||
<td headers="mrs_complete" class="gt_row gt_left">Incomplete</td>
|
||
<td headers="event_datetime" class="gt_row gt_right">NA</td>
|
||
<td headers="event_age" class="gt_row gt_center">NA</td>
|
||
<td headers="event_type" class="gt_row gt_left">NA</td>
|
||
<td headers="new_event_complete" class="gt_row gt_left">NA</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="record_id" class="gt_row gt_right">4</td>
|
||
<td headers="redcap_event_name" class="gt_row gt_left">follow2</td>
|
||
<td headers="redcap_repeat_instrument" class="gt_row gt_left">New Event (?)</td>
|
||
<td headers="redcap_repeat_instance" class="gt_row gt_right">1</td>
|
||
<td headers="cpr" class="gt_row gt_left">NA</td>
|
||
<td headers="inclusion" class="gt_row gt_right">NA</td>
|
||
<td headers="inclusion_time" class="gt_row gt_center">NA</td>
|
||
<td headers="dob" class="gt_row gt_right">NA</td>
|
||
<td headers="age" class="gt_row gt_right">NA</td>
|
||
<td headers="age_integer" class="gt_row gt_right">NA</td>
|
||
<td headers="sex" class="gt_row gt_left">NA</td>
|
||
<td headers="cohabitation" class="gt_row gt_left">NA</td>
|
||
<td headers="hypertension" class="gt_row gt_left">NA</td>
|
||
<td headers="diabetes" class="gt_row gt_left">NA</td>
|
||
<td headers="region" class="gt_row gt_left">NA</td>
|
||
<td headers="baseline_data_start_complete" class="gt_row gt_left">NA</td>
|
||
<td headers="mrs_assessed" class="gt_row gt_left">NA</td>
|
||
<td headers="mrs_date" class="gt_row gt_right">NA</td>
|
||
<td headers="mrs_score" class="gt_row gt_right">NA</td>
|
||
<td headers="mrs_complete" class="gt_row gt_left">NA</td>
|
||
<td headers="event_datetime" class="gt_row gt_right">2024-01-18 12:50:19</td>
|
||
<td headers="event_age" class="gt_row gt_center">NA</td>
|
||
<td headers="event_type" class="gt_row gt_left">AIS</td>
|
||
<td headers="new_event_complete" class="gt_row gt_left">Complete</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="record_id" class="gt_row gt_right">4</td>
|
||
<td headers="redcap_event_name" class="gt_row gt_left">follow2</td>
|
||
<td headers="redcap_repeat_instrument" class="gt_row gt_left">New Event (?)</td>
|
||
<td headers="redcap_repeat_instance" class="gt_row gt_right">2</td>
|
||
<td headers="cpr" class="gt_row gt_left">NA</td>
|
||
<td headers="inclusion" class="gt_row gt_right">NA</td>
|
||
<td headers="inclusion_time" class="gt_row gt_center">NA</td>
|
||
<td headers="dob" class="gt_row gt_right">NA</td>
|
||
<td headers="age" class="gt_row gt_right">NA</td>
|
||
<td headers="age_integer" class="gt_row gt_right">NA</td>
|
||
<td headers="sex" class="gt_row gt_left">NA</td>
|
||
<td headers="cohabitation" class="gt_row gt_left">NA</td>
|
||
<td headers="hypertension" class="gt_row gt_left">NA</td>
|
||
<td headers="diabetes" class="gt_row gt_left">NA</td>
|
||
<td headers="region" class="gt_row gt_left">NA</td>
|
||
<td headers="baseline_data_start_complete" class="gt_row gt_left">NA</td>
|
||
<td headers="mrs_assessed" class="gt_row gt_left">NA</td>
|
||
<td headers="mrs_date" class="gt_row gt_right">NA</td>
|
||
<td headers="mrs_score" class="gt_row gt_right">NA</td>
|
||
<td headers="mrs_complete" class="gt_row gt_left">NA</td>
|
||
<td headers="event_datetime" class="gt_row gt_right">2024-01-18 12:50:22</td>
|
||
<td headers="event_age" class="gt_row gt_center">NA</td>
|
||
<td headers="event_type" class="gt_row gt_left">ICH</td>
|
||
<td headers="new_event_complete" class="gt_row gt_left">Incomplete</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="record_id" class="gt_row gt_right">4</td>
|
||
<td headers="redcap_event_name" class="gt_row gt_left">follow2</td>
|
||
<td headers="redcap_repeat_instrument" class="gt_row gt_left">New Event (?)</td>
|
||
<td headers="redcap_repeat_instance" class="gt_row gt_right">3</td>
|
||
<td headers="cpr" class="gt_row gt_left">NA</td>
|
||
<td headers="inclusion" class="gt_row gt_right">NA</td>
|
||
<td headers="inclusion_time" class="gt_row gt_center">NA</td>
|
||
<td headers="dob" class="gt_row gt_right">NA</td>
|
||
<td headers="age" class="gt_row gt_right">NA</td>
|
||
<td headers="age_integer" class="gt_row gt_right">NA</td>
|
||
<td headers="sex" class="gt_row gt_left">NA</td>
|
||
<td headers="cohabitation" class="gt_row gt_left">NA</td>
|
||
<td headers="hypertension" class="gt_row gt_left">NA</td>
|
||
<td headers="diabetes" class="gt_row gt_left">NA</td>
|
||
<td headers="region" class="gt_row gt_left">NA</td>
|
||
<td headers="baseline_data_start_complete" class="gt_row gt_left">NA</td>
|
||
<td headers="mrs_assessed" class="gt_row gt_left">NA</td>
|
||
<td headers="mrs_date" class="gt_row gt_right">NA</td>
|
||
<td headers="mrs_score" class="gt_row gt_right">NA</td>
|
||
<td headers="mrs_complete" class="gt_row gt_left">NA</td>
|
||
<td headers="event_datetime" class="gt_row gt_right">2024-01-18 12:50:24</td>
|
||
<td headers="event_age" class="gt_row gt_center">NA</td>
|
||
<td headers="event_type" class="gt_row gt_left">Unknown</td>
|
||
<td headers="new_event_complete" class="gt_row gt_left">Complete</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="record_id" class="gt_row gt_right">5</td>
|
||
<td headers="redcap_event_name" class="gt_row gt_left">inclusion</td>
|
||
<td headers="redcap_repeat_instrument" class="gt_row gt_left">NA</td>
|
||
<td headers="redcap_repeat_instance" class="gt_row gt_right">NA</td>
|
||
<td headers="cpr" class="gt_row gt_left">0201976043</td>
|
||
<td headers="inclusion" class="gt_row gt_right">2023-03-23</td>
|
||
<td headers="inclusion_time" class="gt_row gt_center">08:50:31</td>
|
||
<td headers="dob" class="gt_row gt_right">1897-01-02</td>
|
||
<td headers="age" class="gt_row gt_right">126.21751</td>
|
||
<td headers="age_integer" class="gt_row gt_right">126</td>
|
||
<td headers="sex" class="gt_row gt_left">male</td>
|
||
<td headers="cohabitation" class="gt_row gt_left">No</td>
|
||
<td headers="hypertension" class="gt_row gt_left">Yes</td>
|
||
<td headers="diabetes" class="gt_row gt_left">Yes</td>
|
||
<td headers="region" class="gt_row gt_left">East</td>
|
||
<td headers="baseline_data_start_complete" class="gt_row gt_left">Complete</td>
|
||
<td headers="mrs_assessed" class="gt_row gt_left">NA</td>
|
||
<td headers="mrs_date" class="gt_row gt_right">NA</td>
|
||
<td headers="mrs_score" class="gt_row gt_right">NA</td>
|
||
<td headers="mrs_complete" class="gt_row gt_left">Incomplete</td>
|
||
<td headers="event_datetime" class="gt_row gt_right">NA</td>
|
||
<td headers="event_age" class="gt_row gt_center">NA</td>
|
||
<td headers="event_type" class="gt_row gt_left">NA</td>
|
||
<td headers="new_event_complete" class="gt_row gt_left">NA</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="record_id" class="gt_row gt_right">6</td>
|
||
<td headers="redcap_event_name" class="gt_row gt_left">inclusion</td>
|
||
<td headers="redcap_repeat_instrument" class="gt_row gt_left">NA</td>
|
||
<td headers="redcap_repeat_instance" class="gt_row gt_right">NA</td>
|
||
<td headers="cpr" class="gt_row gt_left">1202320122</td>
|
||
<td headers="inclusion" class="gt_row gt_right">2024-01-25</td>
|
||
<td headers="inclusion_time" class="gt_row gt_center">08:49:28</td>
|
||
<td headers="dob" class="gt_row gt_right">1932-02-12</td>
|
||
<td headers="age" class="gt_row gt_right">91.95261</td>
|
||
<td headers="age_integer" class="gt_row gt_right">91</td>
|
||
<td headers="sex" class="gt_row gt_left">female</td>
|
||
<td headers="cohabitation" class="gt_row gt_left">No</td>
|
||
<td headers="hypertension" class="gt_row gt_left">Yes</td>
|
||
<td headers="diabetes" class="gt_row gt_left">No</td>
|
||
<td headers="region" class="gt_row gt_left">East</td>
|
||
<td headers="baseline_data_start_complete" class="gt_row gt_left">Complete</td>
|
||
<td headers="mrs_assessed" class="gt_row gt_left">NA</td>
|
||
<td headers="mrs_date" class="gt_row gt_right">NA</td>
|
||
<td headers="mrs_score" class="gt_row gt_right">NA</td>
|
||
<td headers="mrs_complete" class="gt_row gt_left">Incomplete</td>
|
||
<td headers="event_datetime" class="gt_row gt_right">NA</td>
|
||
<td headers="event_age" class="gt_row gt_center">NA</td>
|
||
<td headers="event_type" class="gt_row gt_left">NA</td>
|
||
<td headers="new_event_complete" class="gt_row gt_left">NA</td>
|
||
</tr>
|
||
</tbody>
|
||
</table>
|
||
</div>
|
||
<div class="sourceCode" id="cb3"><pre class="downlit sourceCode r">
|
||
<code class="sourceCode R"><span><span class="va">redcapcast_meta</span> <span class="op">|></span> <span class="fu">gt</span><span class="fu">::</span><span class="fu"><a href="https://gt.rstudio.com/reference/gt.html" class="external-link">gt</a></span><span class="op">(</span><span class="op">)</span></span></code></pre></div>
|
||
<div id="eexombwkke" style="padding-left:0px;padding-right:0px;padding-top:10px;padding-bottom:10px;overflow-x:auto;overflow-y:auto;width:auto;height:auto;">
|
||
<style>#eexombwkke table {
|
||
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|
||
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|
||
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|
||
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|
||
|
||
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|
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|
||
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|
||
|
||
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|
||
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|
||
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|
||
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|
||
|
||
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|
||
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|
||
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|
||
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|
||
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|
||
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|
||
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|
||
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|
||
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|
||
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|
||
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|
||
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|
||
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|
||
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|
||
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|
||
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|
||
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|
||
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|
||
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|
||
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|
||
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|
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|
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|
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|
||
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|
||
|
||
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|
||
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|
||
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|
||
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|
||
|
||
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|
||
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|
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|
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|
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||
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|
||
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|
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||
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|
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||
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|
||
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|
||
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|
||
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|
||
|
||
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|
||
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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color: #333333;
|
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|
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|
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|
||
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|
||
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|
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|
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|
||
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|
||
|
||
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|
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|
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|
||
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|
||
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|
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|
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|
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|
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|
||
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|
||
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|
||
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|
||
vertical-align: middle;
|
||
}
|
||
|
||
#eexombwkke .gt_from_md > :first-child {
|
||
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|
||
}
|
||
|
||
#eexombwkke .gt_from_md > :last-child {
|
||
margin-bottom: 0;
|
||
}
|
||
|
||
#eexombwkke .gt_row {
|
||
padding-top: 8px;
|
||
padding-bottom: 8px;
|
||
padding-left: 5px;
|
||
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|
||
margin: 10px;
|
||
border-top-style: solid;
|
||
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|
||
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|
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|
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|
||
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|
||
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|
||
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|
||
border-right-color: #D3D3D3;
|
||
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|
||
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|
||
}
|
||
|
||
#eexombwkke .gt_stub {
|
||
color: #333333;
|
||
background-color: #FFFFFF;
|
||
font-size: 100%;
|
||
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|
||
text-transform: inherit;
|
||
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|
||
border-right-width: 2px;
|
||
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|
||
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|
||
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|
||
}
|
||
|
||
#eexombwkke .gt_stub_row_group {
|
||
color: #333333;
|
||
background-color: #FFFFFF;
|
||
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||
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|
||
text-transform: inherit;
|
||
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|
||
border-right-width: 2px;
|
||
border-right-color: #D3D3D3;
|
||
padding-left: 5px;
|
||
padding-right: 5px;
|
||
vertical-align: top;
|
||
}
|
||
|
||
#eexombwkke .gt_row_group_first td {
|
||
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|
||
}
|
||
|
||
#eexombwkke .gt_row_group_first th {
|
||
border-top-width: 2px;
|
||
}
|
||
|
||
#eexombwkke .gt_summary_row {
|
||
color: #333333;
|
||
background-color: #FFFFFF;
|
||
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|
||
padding-top: 8px;
|
||
padding-bottom: 8px;
|
||
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|
||
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|
||
}
|
||
|
||
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|
||
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|
||
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|
||
}
|
||
|
||
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|
||
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|
||
}
|
||
|
||
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|
||
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|
||
padding-bottom: 8px;
|
||
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|
||
padding-right: 5px;
|
||
border-bottom-style: solid;
|
||
border-bottom-width: 2px;
|
||
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|
||
}
|
||
|
||
#eexombwkke .gt_grand_summary_row {
|
||
color: #333333;
|
||
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|
||
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|
||
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|
||
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|
||
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|
||
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|
||
}
|
||
|
||
#eexombwkke .gt_first_grand_summary_row {
|
||
padding-top: 8px;
|
||
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|
||
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|
||
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|
||
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|
||
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|
||
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|
||
}
|
||
|
||
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|
||
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|
||
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|
||
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|
||
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|
||
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|
||
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|
||
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|
||
}
|
||
|
||
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|
||
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|
||
}
|
||
|
||
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|
||
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|
||
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|
||
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|
||
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|
||
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|
||
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|
||
}
|
||
|
||
#eexombwkke .gt_footnotes {
|
||
color: #333333;
|
||
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|
||
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|
||
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|
||
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|
||
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|
||
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|
||
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|
||
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|
||
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|
||
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|
||
}
|
||
|
||
#eexombwkke .gt_footnote {
|
||
margin: 0px;
|
||
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|
||
padding-top: 4px;
|
||
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|
||
padding-left: 5px;
|
||
padding-right: 5px;
|
||
}
|
||
|
||
#eexombwkke .gt_sourcenotes {
|
||
color: #333333;
|
||
background-color: #FFFFFF;
|
||
border-bottom-style: none;
|
||
border-bottom-width: 2px;
|
||
border-bottom-color: #D3D3D3;
|
||
border-left-style: none;
|
||
border-left-width: 2px;
|
||
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|
||
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|
||
border-right-width: 2px;
|
||
border-right-color: #D3D3D3;
|
||
}
|
||
|
||
#eexombwkke .gt_sourcenote {
|
||
font-size: 90%;
|
||
padding-top: 4px;
|
||
padding-bottom: 4px;
|
||
padding-left: 5px;
|
||
padding-right: 5px;
|
||
}
|
||
|
||
#eexombwkke .gt_left {
|
||
text-align: left;
|
||
}
|
||
|
||
#eexombwkke .gt_center {
|
||
text-align: center;
|
||
}
|
||
|
||
#eexombwkke .gt_right {
|
||
text-align: right;
|
||
font-variant-numeric: tabular-nums;
|
||
}
|
||
|
||
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|
||
font-weight: normal;
|
||
}
|
||
|
||
#eexombwkke .gt_font_bold {
|
||
font-weight: bold;
|
||
}
|
||
|
||
#eexombwkke .gt_font_italic {
|
||
font-style: italic;
|
||
}
|
||
|
||
#eexombwkke .gt_super {
|
||
font-size: 65%;
|
||
}
|
||
|
||
#eexombwkke .gt_footnote_marks {
|
||
font-size: 75%;
|
||
vertical-align: 0.4em;
|
||
position: initial;
|
||
}
|
||
|
||
#eexombwkke .gt_asterisk {
|
||
font-size: 100%;
|
||
vertical-align: 0;
|
||
}
|
||
|
||
#eexombwkke .gt_indent_1 {
|
||
text-indent: 5px;
|
||
}
|
||
|
||
#eexombwkke .gt_indent_2 {
|
||
text-indent: 10px;
|
||
}
|
||
|
||
#eexombwkke .gt_indent_3 {
|
||
text-indent: 15px;
|
||
}
|
||
|
||
#eexombwkke .gt_indent_4 {
|
||
text-indent: 20px;
|
||
}
|
||
|
||
#eexombwkke .gt_indent_5 {
|
||
text-indent: 25px;
|
||
}
|
||
|
||
#eexombwkke .katex-display {
|
||
display: inline-flex !important;
|
||
margin-bottom: 0.75em !important;
|
||
}
|
||
|
||
#eexombwkke div.Reactable > div.rt-table > div.rt-thead > div.rt-tr.rt-tr-group-header > div.rt-th-group:after {
|
||
height: 0px !important;
|
||
}
|
||
</style>
|
||
<table class="table gt_table" data-quarto-disable-processing="false" data-quarto-bootstrap="false">
|
||
<thead><tr class="gt_col_headings">
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="field_name">field_name</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="form_name">form_name</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="section_header">section_header</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="field_type">field_type</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="field_label">field_label</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="select_choices_or_calculations">select_choices_or_calculations</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="field_note">field_note</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="text_validation_type_or_show_slider_number">text_validation_type_or_show_slider_number</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="text_validation_min">text_validation_min</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="text_validation_max">text_validation_max</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="identifier">identifier</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="branching_logic">branching_logic</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="required_field">required_field</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="custom_alignment">custom_alignment</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="question_number">question_number</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="matrix_group_name">matrix_group_name</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="matrix_ranking">matrix_ranking</th>
|
||
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="field_annotation">field_annotation</th>
|
||
</tr></thead>
|
||
<tbody class="gt_table_body">
|
||
<tr>
|
||
<td headers="field_name" class="gt_row gt_left">record_id</td>
|
||
<td headers="form_name" class="gt_row gt_left">baseline_data_start</td>
|
||
<td headers="section_header" class="gt_row gt_left">NA</td>
|
||
<td headers="field_type" class="gt_row gt_left">text</td>
|
||
<td headers="field_label" class="gt_row gt_left">ID</td>
|
||
<td headers="select_choices_or_calculations" class="gt_row gt_left">NA</td>
|
||
<td headers="field_note" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_type_or_show_slider_number" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_min" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_max" class="gt_row gt_left">NA</td>
|
||
<td headers="identifier" class="gt_row gt_left">NA</td>
|
||
<td headers="branching_logic" class="gt_row gt_left">NA</td>
|
||
<td headers="required_field" class="gt_row gt_left">NA</td>
|
||
<td headers="custom_alignment" class="gt_row gt_left">NA</td>
|
||
<td headers="question_number" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_group_name" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_ranking" class="gt_row gt_left">NA</td>
|
||
<td headers="field_annotation" class="gt_row gt_left">NA</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="field_name" class="gt_row gt_left">cpr</td>
|
||
<td headers="form_name" class="gt_row gt_left">baseline_data_start</td>
|
||
<td headers="section_header" class="gt_row gt_left">NA</td>
|
||
<td headers="field_type" class="gt_row gt_left">text</td>
|
||
<td headers="field_label" class="gt_row gt_left">CPR (Danish civil registration number)</td>
|
||
<td headers="select_choices_or_calculations" class="gt_row gt_left">NA</td>
|
||
<td headers="field_note" class="gt_row gt_left">ddmmyyxxxx</td>
|
||
<td headers="text_validation_type_or_show_slider_number" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_min" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_max" class="gt_row gt_left">NA</td>
|
||
<td headers="identifier" class="gt_row gt_left">y</td>
|
||
<td headers="branching_logic" class="gt_row gt_left">NA</td>
|
||
<td headers="required_field" class="gt_row gt_left">y</td>
|
||
<td headers="custom_alignment" class="gt_row gt_left">NA</td>
|
||
<td headers="question_number" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_group_name" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_ranking" class="gt_row gt_left">NA</td>
|
||
<td headers="field_annotation" class="gt_row gt_left">NA</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="field_name" class="gt_row gt_left">inclusion</td>
|
||
<td headers="form_name" class="gt_row gt_left">baseline_data_start</td>
|
||
<td headers="section_header" class="gt_row gt_left">NA</td>
|
||
<td headers="field_type" class="gt_row gt_left">text</td>
|
||
<td headers="field_label" class="gt_row gt_left">Inclusion date</td>
|
||
<td headers="select_choices_or_calculations" class="gt_row gt_left">NA</td>
|
||
<td headers="field_note" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_type_or_show_slider_number" class="gt_row gt_left">date_ymd</td>
|
||
<td headers="text_validation_min" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_max" class="gt_row gt_left">NA</td>
|
||
<td headers="identifier" class="gt_row gt_left">NA</td>
|
||
<td headers="branching_logic" class="gt_row gt_left">NA</td>
|
||
<td headers="required_field" class="gt_row gt_left">NA</td>
|
||
<td headers="custom_alignment" class="gt_row gt_left">NA</td>
|
||
<td headers="question_number" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_group_name" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_ranking" class="gt_row gt_left">NA</td>
|
||
<td headers="field_annotation" class="gt_row gt_left">NA</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="field_name" class="gt_row gt_left">dob</td>
|
||
<td headers="form_name" class="gt_row gt_left">baseline_data_start</td>
|
||
<td headers="section_header" class="gt_row gt_left">NA</td>
|
||
<td headers="field_type" class="gt_row gt_left">text</td>
|
||
<td headers="field_label" class="gt_row gt_left">Date of birth (From CPR)</td>
|
||
<td headers="select_choices_or_calculations" class="gt_row gt_left">NA</td>
|
||
<td headers="field_note" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_type_or_show_slider_number" class="gt_row gt_left">date_ymd</td>
|
||
<td headers="text_validation_min" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_max" class="gt_row gt_left">NA</td>
|
||
<td headers="identifier" class="gt_row gt_left">NA</td>
|
||
<td headers="branching_logic" class="gt_row gt_left">NA</td>
|
||
<td headers="required_field" class="gt_row gt_left">NA</td>
|
||
<td headers="custom_alignment" class="gt_row gt_left">NA</td>
|
||
<td headers="question_number" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_group_name" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_ranking" class="gt_row gt_left">NA</td>
|
||
<td headers="field_annotation" class="gt_row gt_left">@CALCTEXT(if([cpr]!="", concat(if(mid([cpr], 7, 1)>=0 and mid([cpr], 7, 1)<=3,19, if(mid([cpr], 5, 2)>=0 and mid([cpr], 5, 2)<=36 and mid([cpr], 7, 1)>=4 and mid([cpr], 7, 1)<=4,20, if(mid([cpr], 5, 2)>=37 and mid([cpr], 5, 2)<=99 and mid([cpr], 7, 1)>=4 and mid([cpr], 7, 1)<=4,19, if(mid([cpr], 5, 2)>=0 and mid([cpr], 5, 2)<=57 and mid([cpr], 7, 1)>=5 and mid([cpr], 7, 1)<=5,20, if(mid([cpr], 5, 2)>=58 and mid([cpr], 5, 2)<=99 and mid([cpr], 7, 1)>=5 and mid([cpr], 7, 1)<=5,18, if(mid([cpr], 5, 2)>=0 and mid([cpr], 5, 2)<=57 and mid([cpr], 7, 1)>=6 and mid([cpr], 7, 1)<=6,20, if(mid([cpr], 5, 2)>=58 and mid([cpr], 5, 2)<=99 and mid([cpr], 7, 1)>=6 and mid([cpr], 7, 1)<=6,18, if(mid([cpr], 5, 2)>=0 and mid([cpr], 5, 2)<=57 and mid([cpr], 7, 1)>=7 and mid([cpr], 7, 1)<=7,20, if(mid([cpr], 5, 2)>=58 and mid([cpr], 5, 2)<=99 and mid([cpr], 7, 1)>=7 and mid([cpr], 7, 1)<=7,18, if(mid([cpr], 5, 2)>=0 and mid([cpr], 5, 2)<=57 and mid([cpr], 7, 1)>=8 and mid([cpr], 7, 1)<=8,20, if(mid([cpr], 5, 2)>=58 and mid([cpr], 5, 2)<=99 and mid([cpr], 7, 1)>=8 and mid([cpr], 7, 1)<=8,18, if(mid([cpr], 5, 2)>=0 and mid([cpr], 5, 2)<=36 and mid([cpr], 7, 1)>=9 and mid([cpr], 7, 1)<=9,20, if(mid([cpr], 5, 2)>=37 and mid([cpr], 5, 2)<=99 and mid([cpr], 7, 1)>=9 and mid([cpr], 7, 1)<=9,19,17))))))))))))), mid([cpr], 5, 2), "-",mid([cpr],3, 2), "-", left([cpr], 2) ), ""))</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="field_name" class="gt_row gt_left">age</td>
|
||
<td headers="form_name" class="gt_row gt_left">baseline_data_start</td>
|
||
<td headers="section_header" class="gt_row gt_left">NA</td>
|
||
<td headers="field_type" class="gt_row gt_left">calc</td>
|
||
<td headers="field_label" class="gt_row gt_left">Age
|
||
Note: Apparently, the build in datediff() function does not handle counting whole years. This results in wrongly counting age higher around the date of birth.</td>
|
||
<td headers="select_choices_or_calculations" class="gt_row gt_left">if([cpr]!="" and [inclusion]!="", datediff([dob], [inclusion], 'y'), "")</td>
|
||
<td headers="field_note" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_type_or_show_slider_number" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_min" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_max" class="gt_row gt_left">NA</td>
|
||
<td headers="identifier" class="gt_row gt_left">NA</td>
|
||
<td headers="branching_logic" class="gt_row gt_left">NA</td>
|
||
<td headers="required_field" class="gt_row gt_left">NA</td>
|
||
<td headers="custom_alignment" class="gt_row gt_left">NA</td>
|
||
<td headers="question_number" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_group_name" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_ranking" class="gt_row gt_left">NA</td>
|
||
<td headers="field_annotation" class="gt_row gt_left">NA</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="field_name" class="gt_row gt_left">age_integer</td>
|
||
<td headers="form_name" class="gt_row gt_left">baseline_data_start</td>
|
||
<td headers="section_header" class="gt_row gt_left">NA</td>
|
||
<td headers="field_type" class="gt_row gt_left">calc</td>
|
||
<td headers="field_label" class="gt_row gt_left">Age integer
|
||
Note: as opposed to the build in datediff() this handles counting years as integers very well. Calculate decimal years in statistical programming software. In R you can use with(ds, stRoke::age_calc(dob, inclusion)).</td>
|
||
<td headers="select_choices_or_calculations" class="gt_row gt_left">if([cpr]!="", left([inclusion], 4)-left([dob], 4) - if(mid([dob], 6, 2) < mid([inclusion], 6, 2) or (mid([dob], 6, 2) = mid([inclusion], 6, 2) and mid([dob], 9, 2) <= mid([inclusion], 9, 2)), 0, 1),"")</td>
|
||
<td headers="field_note" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_type_or_show_slider_number" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_min" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_max" class="gt_row gt_left">NA</td>
|
||
<td headers="identifier" class="gt_row gt_left">NA</td>
|
||
<td headers="branching_logic" class="gt_row gt_left">NA</td>
|
||
<td headers="required_field" class="gt_row gt_left">NA</td>
|
||
<td headers="custom_alignment" class="gt_row gt_left">NA</td>
|
||
<td headers="question_number" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_group_name" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_ranking" class="gt_row gt_left">NA</td>
|
||
<td headers="field_annotation" class="gt_row gt_left">NA</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="field_name" class="gt_row gt_left">sex</td>
|
||
<td headers="form_name" class="gt_row gt_left">baseline_data_start</td>
|
||
<td headers="section_header" class="gt_row gt_left">NA</td>
|
||
<td headers="field_type" class="gt_row gt_left">text</td>
|
||
<td headers="field_label" class="gt_row gt_left">Legal sex</td>
|
||
<td headers="select_choices_or_calculations" class="gt_row gt_left">NA</td>
|
||
<td headers="field_note" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_type_or_show_slider_number" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_min" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_max" class="gt_row gt_left">NA</td>
|
||
<td headers="identifier" class="gt_row gt_left">NA</td>
|
||
<td headers="branching_logic" class="gt_row gt_left">NA</td>
|
||
<td headers="required_field" class="gt_row gt_left">NA</td>
|
||
<td headers="custom_alignment" class="gt_row gt_left">NA</td>
|
||
<td headers="question_number" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_group_name" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_ranking" class="gt_row gt_left">NA</td>
|
||
<td headers="field_annotation" class="gt_row gt_left">@CALCTEXT(if([cpr]!="",if((right([cpr],1)=1 or right([cpr],1)=3 or right([cpr],1)=5 or right([cpr],1)=7 or right([cpr],1)=9),"male","female"),""))</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="field_name" class="gt_row gt_left">cohabitation</td>
|
||
<td headers="form_name" class="gt_row gt_left">baseline_data_start</td>
|
||
<td headers="section_header" class="gt_row gt_left">History and social</td>
|
||
<td headers="field_type" class="gt_row gt_left">radio</td>
|
||
<td headers="field_label" class="gt_row gt_left">Cohabitation</td>
|
||
<td headers="select_choices_or_calculations" class="gt_row gt_left">1, Yes | 2, No</td>
|
||
<td headers="field_note" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_type_or_show_slider_number" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_min" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_max" class="gt_row gt_left">NA</td>
|
||
<td headers="identifier" class="gt_row gt_left">NA</td>
|
||
<td headers="branching_logic" class="gt_row gt_left">NA</td>
|
||
<td headers="required_field" class="gt_row gt_left">NA</td>
|
||
<td headers="custom_alignment" class="gt_row gt_left">NA</td>
|
||
<td headers="question_number" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_group_name" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_ranking" class="gt_row gt_left">NA</td>
|
||
<td headers="field_annotation" class="gt_row gt_left">NA</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="field_name" class="gt_row gt_left">hypertension</td>
|
||
<td headers="form_name" class="gt_row gt_left">baseline_data_start</td>
|
||
<td headers="section_header" class="gt_row gt_left">NA</td>
|
||
<td headers="field_type" class="gt_row gt_left">radio</td>
|
||
<td headers="field_label" class="gt_row gt_left">Hypertension</td>
|
||
<td headers="select_choices_or_calculations" class="gt_row gt_left">1, Yes | 2, No</td>
|
||
<td headers="field_note" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_type_or_show_slider_number" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_min" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_max" class="gt_row gt_left">NA</td>
|
||
<td headers="identifier" class="gt_row gt_left">NA</td>
|
||
<td headers="branching_logic" class="gt_row gt_left">NA</td>
|
||
<td headers="required_field" class="gt_row gt_left">NA</td>
|
||
<td headers="custom_alignment" class="gt_row gt_left">NA</td>
|
||
<td headers="question_number" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_group_name" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_ranking" class="gt_row gt_left">NA</td>
|
||
<td headers="field_annotation" class="gt_row gt_left">NA</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="field_name" class="gt_row gt_left">diabetes</td>
|
||
<td headers="form_name" class="gt_row gt_left">baseline_data_start</td>
|
||
<td headers="section_header" class="gt_row gt_left">NA</td>
|
||
<td headers="field_type" class="gt_row gt_left">radio</td>
|
||
<td headers="field_label" class="gt_row gt_left">Diabetes</td>
|
||
<td headers="select_choices_or_calculations" class="gt_row gt_left">1, Yes | 2, No</td>
|
||
<td headers="field_note" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_type_or_show_slider_number" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_min" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_max" class="gt_row gt_left">NA</td>
|
||
<td headers="identifier" class="gt_row gt_left">NA</td>
|
||
<td headers="branching_logic" class="gt_row gt_left">NA</td>
|
||
<td headers="required_field" class="gt_row gt_left">NA</td>
|
||
<td headers="custom_alignment" class="gt_row gt_left">NA</td>
|
||
<td headers="question_number" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_group_name" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_ranking" class="gt_row gt_left">NA</td>
|
||
<td headers="field_annotation" class="gt_row gt_left">NA</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="field_name" class="gt_row gt_left">region</td>
|
||
<td headers="form_name" class="gt_row gt_left">baseline_data_start</td>
|
||
<td headers="section_header" class="gt_row gt_left">Area</td>
|
||
<td headers="field_type" class="gt_row gt_left">dropdown</td>
|
||
<td headers="field_label" class="gt_row gt_left">Region</td>
|
||
<td headers="select_choices_or_calculations" class="gt_row gt_left">1, North | 2, East | 3, South | 4, West</td>
|
||
<td headers="field_note" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_type_or_show_slider_number" class="gt_row gt_left">autocomplete</td>
|
||
<td headers="text_validation_min" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_max" class="gt_row gt_left">NA</td>
|
||
<td headers="identifier" class="gt_row gt_left">NA</td>
|
||
<td headers="branching_logic" class="gt_row gt_left">NA</td>
|
||
<td headers="required_field" class="gt_row gt_left">NA</td>
|
||
<td headers="custom_alignment" class="gt_row gt_left">NA</td>
|
||
<td headers="question_number" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_group_name" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_ranking" class="gt_row gt_left">NA</td>
|
||
<td headers="field_annotation" class="gt_row gt_left">NA</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="field_name" class="gt_row gt_left">mrs_assessed</td>
|
||
<td headers="form_name" class="gt_row gt_left">mrs</td>
|
||
<td headers="section_header" class="gt_row gt_left">NA</td>
|
||
<td headers="field_type" class="gt_row gt_left">radio</td>
|
||
<td headers="field_label" class="gt_row gt_left">Assesed</td>
|
||
<td headers="select_choices_or_calculations" class="gt_row gt_left">1, Yes | 2, No</td>
|
||
<td headers="field_note" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_type_or_show_slider_number" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_min" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_max" class="gt_row gt_left">NA</td>
|
||
<td headers="identifier" class="gt_row gt_left">NA</td>
|
||
<td headers="branching_logic" class="gt_row gt_left">NA</td>
|
||
<td headers="required_field" class="gt_row gt_left">NA</td>
|
||
<td headers="custom_alignment" class="gt_row gt_left">NA</td>
|
||
<td headers="question_number" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_group_name" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_ranking" class="gt_row gt_left">NA</td>
|
||
<td headers="field_annotation" class="gt_row gt_left">NA</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="field_name" class="gt_row gt_left">mrs_date</td>
|
||
<td headers="form_name" class="gt_row gt_left">mrs</td>
|
||
<td headers="section_header" class="gt_row gt_left">NA</td>
|
||
<td headers="field_type" class="gt_row gt_left">text</td>
|
||
<td headers="field_label" class="gt_row gt_left">Assessment date</td>
|
||
<td headers="select_choices_or_calculations" class="gt_row gt_left">NA</td>
|
||
<td headers="field_note" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_type_or_show_slider_number" class="gt_row gt_left">date_dmy</td>
|
||
<td headers="text_validation_min" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_max" class="gt_row gt_left">NA</td>
|
||
<td headers="identifier" class="gt_row gt_left">NA</td>
|
||
<td headers="branching_logic" class="gt_row gt_left">NA</td>
|
||
<td headers="required_field" class="gt_row gt_left">NA</td>
|
||
<td headers="custom_alignment" class="gt_row gt_left">NA</td>
|
||
<td headers="question_number" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_group_name" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_ranking" class="gt_row gt_left">NA</td>
|
||
<td headers="field_annotation" class="gt_row gt_left">NA</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="field_name" class="gt_row gt_left">mrs_score</td>
|
||
<td headers="form_name" class="gt_row gt_left">mrs</td>
|
||
<td headers="section_header" class="gt_row gt_left">NA</td>
|
||
<td headers="field_type" class="gt_row gt_left">radio</td>
|
||
<td headers="field_label" class="gt_row gt_left">mRS score</td>
|
||
<td headers="select_choices_or_calculations" class="gt_row gt_left">0, 0 | 1, 1 | 2, 2 | 3, 3 | 4, 4 | 5, 5</td>
|
||
<td headers="field_note" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_type_or_show_slider_number" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_min" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_max" class="gt_row gt_left">NA</td>
|
||
<td headers="identifier" class="gt_row gt_left">NA</td>
|
||
<td headers="branching_logic" class="gt_row gt_left">NA</td>
|
||
<td headers="required_field" class="gt_row gt_left">NA</td>
|
||
<td headers="custom_alignment" class="gt_row gt_left">NA</td>
|
||
<td headers="question_number" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_group_name" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_ranking" class="gt_row gt_left">NA</td>
|
||
<td headers="field_annotation" class="gt_row gt_left">NA</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="field_name" class="gt_row gt_left">event_date</td>
|
||
<td headers="form_name" class="gt_row gt_left">new_event</td>
|
||
<td headers="section_header" class="gt_row gt_left">NA</td>
|
||
<td headers="field_type" class="gt_row gt_left">text</td>
|
||
<td headers="field_label" class="gt_row gt_left">Date of event</td>
|
||
<td headers="select_choices_or_calculations" class="gt_row gt_left">NA</td>
|
||
<td headers="field_note" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_type_or_show_slider_number" class="gt_row gt_left">date_dmy</td>
|
||
<td headers="text_validation_min" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_max" class="gt_row gt_left">NA</td>
|
||
<td headers="identifier" class="gt_row gt_left">NA</td>
|
||
<td headers="branching_logic" class="gt_row gt_left">NA</td>
|
||
<td headers="required_field" class="gt_row gt_left">NA</td>
|
||
<td headers="custom_alignment" class="gt_row gt_left">NA</td>
|
||
<td headers="question_number" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_group_name" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_ranking" class="gt_row gt_left">NA</td>
|
||
<td headers="field_annotation" class="gt_row gt_left">NA</td>
|
||
</tr>
|
||
<tr>
|
||
<td headers="field_name" class="gt_row gt_left">event_type</td>
|
||
<td headers="form_name" class="gt_row gt_left">new_event</td>
|
||
<td headers="section_header" class="gt_row gt_left">NA</td>
|
||
<td headers="field_type" class="gt_row gt_left">radio</td>
|
||
<td headers="field_label" class="gt_row gt_left">Neurovascular event</td>
|
||
<td headers="select_choices_or_calculations" class="gt_row gt_left">1, TIA | 2, AIS | 3, ICH | 4, SAH | 99, Unknown</td>
|
||
<td headers="field_note" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_type_or_show_slider_number" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_min" class="gt_row gt_left">NA</td>
|
||
<td headers="text_validation_max" class="gt_row gt_left">NA</td>
|
||
<td headers="identifier" class="gt_row gt_left">NA</td>
|
||
<td headers="branching_logic" class="gt_row gt_left">NA</td>
|
||
<td headers="required_field" class="gt_row gt_left">NA</td>
|
||
<td headers="custom_alignment" class="gt_row gt_left">NA</td>
|
||
<td headers="question_number" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_group_name" class="gt_row gt_left">NA</td>
|
||
<td headers="matrix_ranking" class="gt_row gt_left">NA</td>
|
||
<td headers="field_annotation" class="gt_row gt_left">NA</td>
|
||
</tr>
|
||
</tbody>
|
||
</table>
|
||
</div>
|
||
<div class="sourceCode" id="cb4"><pre class="downlit sourceCode r">
|
||
<code class="sourceCode R"><span><span class="va">list</span> <span class="op"><-</span></span>
|
||
<span> <span class="fu"><a href="../reference/REDCap_split.html">REDCap_split</a></span><span class="op">(</span></span>
|
||
<span> records <span class="op">=</span> <span class="va">redcapcast_data</span>,</span>
|
||
<span> metadata <span class="op">=</span> <span class="va">redcapcast_meta</span>,</span>
|
||
<span> forms <span class="op">=</span> <span class="st">"repeating"</span></span>
|
||
<span> <span class="op">)</span> <span class="op">|></span> </span>
|
||
<span> <span class="fu"><a href="../reference/sanitize_split.html">sanitize_split</a></span><span class="op">(</span><span class="op">)</span></span>
|
||
<span><span class="fu"><a href="https://rdrr.io/r/utils/str.html" class="external-link">str</a></span><span class="op">(</span><span class="va">list</span><span class="op">)</span></span>
|
||
<span><span class="co">#> List of 2</span></span>
|
||
<span><span class="co">#> $ : tibble [10 × 17] (S3: tbl_df/tbl/data.frame)</span></span>
|
||
<span><span class="co">#> ..$ record_id : num [1:10] 1 2 2 3 3 3 4 4 5 6</span></span>
|
||
<span><span class="co">#> ..$ redcap_event_name : chr [1:10] "inclusion" "inclusion" "follow1" "inclusion" ...</span></span>
|
||
<span><span class="co">#> ..$ cpr : chr [1:10] "1203401OB4" "0102342303" NA "2301569823" ...</span></span>
|
||
<span><span class="co">#> ..$ inclusion : Date[1:10], format: "2023-03-13" "2023-03-01" ...</span></span>
|
||
<span><span class="co">#> ..$ dob : Date[1:10], format: "1940-03-12" "1934-02-01" ...</span></span>
|
||
<span><span class="co">#> ..$ age : num [1:10] 83 89.1 NA 66.1 NA ...</span></span>
|
||
<span><span class="co">#> ..$ age_integer : num [1:10] 83 89 NA 66 NA NA 117 NA 126 91</span></span>
|
||
<span><span class="co">#> ..$ sex : chr [1:10] "female" "male" NA "male" ...</span></span>
|
||
<span><span class="co">#> ..$ cohabitation : chr [1:10] "Yes" "Yes" NA "No" ...</span></span>
|
||
<span><span class="co">#> ..$ hypertension : chr [1:10] "No" "No" NA "Yes" ...</span></span>
|
||
<span><span class="co">#> ..$ diabetes : chr [1:10] "Yes" "No" NA "Yes" ...</span></span>
|
||
<span><span class="co">#> ..$ region : chr [1:10] "East" "South" NA "North" ...</span></span>
|
||
<span><span class="co">#> ..$ baseline_data_start_complete: chr [1:10] "Incomplete" "Incomplete" NA "Incomplete" ...</span></span>
|
||
<span><span class="co">#> ..$ mrs_assessed : chr [1:10] "Yes" "Yes" "Yes" NA ...</span></span>
|
||
<span><span class="co">#> ..$ mrs_date : Date[1:10], format: "2023-03-13" "2023-03-07" ...</span></span>
|
||
<span><span class="co">#> ..$ mrs_score : num [1:10] 1 1 3 NA 2 1 NA NA NA NA</span></span>
|
||
<span><span class="co">#> ..$ mrs_complete : chr [1:10] "Incomplete" "Incomplete" "Incomplete" "Incomplete" ...</span></span>
|
||
<span><span class="co">#> $ new_event: tibble [9 × 6] (S3: tbl_df/tbl/data.frame)</span></span>
|
||
<span><span class="co">#> ..$ record_id : num [1:9] 2 3 3 3 3 3 4 4 4</span></span>
|
||
<span><span class="co">#> ..$ redcap_event_name : chr [1:9] "follow1" "follow1" "follow1" "follow2" ...</span></span>
|
||
<span><span class="co">#> ..$ redcap_repeat_instrument: chr [1:9] "new_event" "new_event" "new_event" "new_event" ...</span></span>
|
||
<span><span class="co">#> ..$ redcap_repeat_instance : num [1:9] 1 1 2 1 2 3 1 2 3</span></span>
|
||
<span><span class="co">#> ..$ event_type : chr [1:9] "TIA" "AIS" "ICH" "ICH" ...</span></span>
|
||
<span><span class="co">#> ..$ new_event_complete : chr [1:9] "Incomplete" "Incomplete" "Incomplete" "Incomplete" ...</span></span></code></pre></div>
|
||
<div class="sourceCode" id="cb5"><pre class="downlit sourceCode r">
|
||
<code class="sourceCode R"><span><span class="va">list</span> <span class="op"><-</span></span>
|
||
<span> <span class="fu"><a href="../reference/REDCap_split.html">REDCap_split</a></span><span class="op">(</span></span>
|
||
<span> records <span class="op">=</span> <span class="va">redcapcast_data</span>,</span>
|
||
<span> metadata <span class="op">=</span> <span class="va">redcapcast_meta</span>,</span>
|
||
<span> forms <span class="op">=</span> <span class="st">"all"</span></span>
|
||
<span> <span class="op">)</span> <span class="op">|></span> </span>
|
||
<span> <span class="fu"><a href="../reference/sanitize_split.html">sanitize_split</a></span><span class="op">(</span><span class="op">)</span></span>
|
||
<span><span class="fu"><a href="https://rdrr.io/r/utils/str.html" class="external-link">str</a></span><span class="op">(</span><span class="va">list</span><span class="op">)</span></span>
|
||
<span><span class="co">#> List of 3</span></span>
|
||
<span><span class="co">#> $ baseline_data_start: tibble [6 × 13] (S3: tbl_df/tbl/data.frame)</span></span>
|
||
<span><span class="co">#> ..$ record_id : num [1:6] 1 2 3 4 5 6</span></span>
|
||
<span><span class="co">#> ..$ redcap_event_name : chr [1:6] "inclusion" "inclusion" "inclusion" "inclusion" ...</span></span>
|
||
<span><span class="co">#> ..$ cpr : chr [1:6] "1203401OB4" "0102342303" "2301569823" "0204051342" ...</span></span>
|
||
<span><span class="co">#> ..$ inclusion : Date[1:6], format: "2023-03-13" "2023-03-01" ...</span></span>
|
||
<span><span class="co">#> ..$ dob : Date[1:6], format: "1940-03-12" "1934-02-01" ...</span></span>
|
||
<span><span class="co">#> ..$ age : num [1:6] 83 89.1 66.1 117.9 126.2 ...</span></span>
|
||
<span><span class="co">#> ..$ age_integer : num [1:6] 83 89 66 117 126 91</span></span>
|
||
<span><span class="co">#> ..$ sex : chr [1:6] "female" "male" "male" "female" ...</span></span>
|
||
<span><span class="co">#> ..$ cohabitation : chr [1:6] "Yes" "Yes" "No" NA ...</span></span>
|
||
<span><span class="co">#> ..$ hypertension : chr [1:6] "No" "No" "Yes" NA ...</span></span>
|
||
<span><span class="co">#> ..$ diabetes : chr [1:6] "Yes" "No" "Yes" NA ...</span></span>
|
||
<span><span class="co">#> ..$ region : chr [1:6] "East" "South" "North" NA ...</span></span>
|
||
<span><span class="co">#> ..$ baseline_data_start_complete: chr [1:6] "Incomplete" "Incomplete" "Incomplete" "Incomplete" ...</span></span>
|
||
<span><span class="co">#> $ mrs : tibble [5 × 6] (S3: tbl_df/tbl/data.frame)</span></span>
|
||
<span><span class="co">#> ..$ record_id : num [1:5] 1 2 2 3 3</span></span>
|
||
<span><span class="co">#> ..$ redcap_event_name: chr [1:5] "inclusion" "inclusion" "follow1" "follow1" ...</span></span>
|
||
<span><span class="co">#> ..$ mrs_assessed : chr [1:5] "Yes" "Yes" "Yes" "Yes" ...</span></span>
|
||
<span><span class="co">#> ..$ mrs_date : Date[1:5], format: "2023-03-13" "2023-03-07" ...</span></span>
|
||
<span><span class="co">#> ..$ mrs_score : num [1:5] 1 1 3 2 1</span></span>
|
||
<span><span class="co">#> ..$ mrs_complete : chr [1:5] "Incomplete" "Incomplete" "Incomplete" "Incomplete" ...</span></span>
|
||
<span><span class="co">#> $ new_event : tibble [9 × 6] (S3: tbl_df/tbl/data.frame)</span></span>
|
||
<span><span class="co">#> ..$ record_id : num [1:9] 2 3 3 3 3 3 4 4 4</span></span>
|
||
<span><span class="co">#> ..$ redcap_event_name : chr [1:9] "follow1" "follow1" "follow1" "follow2" ...</span></span>
|
||
<span><span class="co">#> ..$ redcap_repeat_instrument: chr [1:9] "new_event" "new_event" "new_event" "new_event" ...</span></span>
|
||
<span><span class="co">#> ..$ redcap_repeat_instance : num [1:9] 1 1 2 1 2 3 1 2 3</span></span>
|
||
<span><span class="co">#> ..$ event_type : chr [1:9] "TIA" "AIS" "ICH" "ICH" ...</span></span>
|
||
<span><span class="co">#> ..$ new_event_complete : chr [1:9] "Incomplete" "Incomplete" "Incomplete" "Incomplete" ...</span></span></code></pre></div>
|
||
</div>
|
||
<div class="section level2">
|
||
<h2 id="reading-data-from-redcap">Reading data from REDCap<a class="anchor" aria-label="anchor" href="#reading-data-from-redcap"></a>
|
||
</h2>
|
||
<p>This function wraps all the above demonstrated function to get the
|
||
dataset, the metadata, apply the <code>REDCap_split</code>function and
|
||
then a bit of cleaning. It just cuts outs all the steps for an easier
|
||
approach.</p>
|
||
<p>The function works very similar to the
|
||
<code><a href="https://ouhscbbmc.github.io/REDCapR/reference/redcap_read.html" class="external-link">REDCapR::redcap_read()</a></code> in allowing to specify fields,
|
||
events and forms for export instead of exporting the whole database and
|
||
filtering afterwards. I believe this is a better and safer, focused
|
||
approach.</p>
|
||
<div class="sourceCode" id="cb6"><pre class="downlit sourceCode r">
|
||
<code class="sourceCode R"><span><span class="co"># read_redcap_tables(uri = "YOUR URI", token = "YOUR TOKEN")</span></span></code></pre></div>
|
||
</div>
|
||
<div class="section level2">
|
||
<h2 id="pivotting-to-wider-format">Pivotting to wider format<a class="anchor" aria-label="anchor" href="#pivotting-to-wider-format"></a>
|
||
</h2>
|
||
<div class="sourceCode" id="cb7"><pre class="downlit sourceCode r">
|
||
<code class="sourceCode R"><span><span class="fu"><a href="../reference/redcap_wider.html">redcap_wider</a></span><span class="op">(</span><span class="va">list</span><span class="op">)</span> <span class="op">|></span> <span class="fu"><a href="https://rdrr.io/r/utils/str.html" class="external-link">str</a></span><span class="op">(</span><span class="op">)</span></span>
|
||
<span><span class="co">#> Joining with `by = join_by(record_id)`</span></span>
|
||
<span><span class="co">#> Joining with `by = join_by(record_id)`</span></span>
|
||
<span><span class="co">#> 'data.frame': 6 obs. of 36 variables:</span></span>
|
||
<span><span class="co">#> $ record_id : num 1 2 3 4 5 6</span></span>
|
||
<span><span class="co">#> $ cpr : chr "1203401OB4" "0102342303" "2301569823" "0204051342" ...</span></span>
|
||
<span><span class="co">#> $ inclusion : Date, format: "2023-03-13" "2023-03-01" ...</span></span>
|
||
<span><span class="co">#> $ dob : Date, format: "1940-03-12" "1934-02-01" ...</span></span>
|
||
<span><span class="co">#> $ age : num 83 89.1 66.1 117.9 126.2 ...</span></span>
|
||
<span><span class="co">#> $ age_integer : num 83 89 66 117 126 91</span></span>
|
||
<span><span class="co">#> $ sex : chr "female" "male" "male" "female" ...</span></span>
|
||
<span><span class="co">#> $ cohabitation : chr "Yes" "Yes" "No" NA ...</span></span>
|
||
<span><span class="co">#> $ hypertension : chr "No" "No" "Yes" NA ...</span></span>
|
||
<span><span class="co">#> $ diabetes : chr "Yes" "No" "Yes" NA ...</span></span>
|
||
<span><span class="co">#> $ region : chr "East" "South" "North" NA ...</span></span>
|
||
<span><span class="co">#> $ baseline_data_start_complete: chr "Incomplete" "Incomplete" "Incomplete" "Incomplete" ...</span></span>
|
||
<span><span class="co">#> $ mrs_assessed_inclusion : chr "Yes" "Yes" NA NA ...</span></span>
|
||
<span><span class="co">#> $ mrs_assessed_follow1 : chr NA "Yes" "Yes" NA ...</span></span>
|
||
<span><span class="co">#> $ mrs_assessed_follow2 : chr NA NA "Yes" NA ...</span></span>
|
||
<span><span class="co">#> $ mrs_date_inclusion : Date, format: "2023-03-13" "2023-03-07" ...</span></span>
|
||
<span><span class="co">#> $ mrs_date_follow1 : Date, format: NA "2023-03-09" ...</span></span>
|
||
<span><span class="co">#> $ mrs_date_follow2 : Date, format: NA NA ...</span></span>
|
||
<span><span class="co">#> $ mrs_score_inclusion : num 1 1 NA NA NA NA</span></span>
|
||
<span><span class="co">#> $ mrs_score_follow1 : num NA 3 2 NA NA NA</span></span>
|
||
<span><span class="co">#> $ mrs_score_follow2 : num NA NA 1 NA NA NA</span></span>
|
||
<span><span class="co">#> $ mrs_complete_inclusion : chr "Incomplete" "Incomplete" NA NA ...</span></span>
|
||
<span><span class="co">#> $ mrs_complete_follow1 : chr NA "Incomplete" "Incomplete" NA ...</span></span>
|
||
<span><span class="co">#> $ mrs_complete_follow2 : chr NA NA "Incomplete" NA ...</span></span>
|
||
<span><span class="co">#> $ event_type_1_follow1 : chr NA "TIA" "AIS" NA ...</span></span>
|
||
<span><span class="co">#> $ event_type_1_follow2 : chr NA NA "ICH" "AIS" ...</span></span>
|
||
<span><span class="co">#> $ new_event_complete_1_follow1: chr NA "Incomplete" "Incomplete" NA ...</span></span>
|
||
<span><span class="co">#> $ new_event_complete_1_follow2: chr NA NA "Incomplete" "Complete" ...</span></span>
|
||
<span><span class="co">#> $ event_type_2_follow1 : chr NA NA "ICH" NA ...</span></span>
|
||
<span><span class="co">#> $ event_type_2_follow2 : chr NA NA "TIA" "ICH" ...</span></span>
|
||
<span><span class="co">#> $ event_type_3_follow1 : chr NA NA NA NA ...</span></span>
|
||
<span><span class="co">#> $ event_type_3_follow2 : chr NA NA "AIS" "Unknown" ...</span></span>
|
||
<span><span class="co">#> $ new_event_complete_2_follow1: chr NA NA "Incomplete" NA ...</span></span>
|
||
<span><span class="co">#> $ new_event_complete_2_follow2: chr NA NA "Incomplete" "Incomplete" ...</span></span>
|
||
<span><span class="co">#> $ new_event_complete_3_follow1: chr NA NA NA NA ...</span></span>
|
||
<span><span class="co">#> $ new_event_complete_3_follow2: chr NA NA "Incomplete" "Complete" ...</span></span></code></pre></div>
|
||
</div>
|
||
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