mirror of
https://github.com/agdamsbo/REDCapCAST.git
synced 2024-11-27 15:21:55 +01:00
43 lines
1.1 KiB
R
43 lines
1.1 KiB
R
#' Retrieve project API key if stored, if not, set and retrieve
|
|
#'
|
|
#' @param key.name character vector of key name
|
|
#'
|
|
#' @return character vector
|
|
#' @importFrom keyring key_list key_get key_set
|
|
#' @export
|
|
get_api_key <- function(key.name) {
|
|
if (key.name %in% keyring::key_list()$service) {
|
|
keyring::key_get(service = key.name)
|
|
} else {
|
|
keyring::key_set(service = key.name, prompt = "Provide REDCap API key:")
|
|
keyring::key_get(service = key.name)
|
|
}
|
|
}
|
|
|
|
|
|
#' Secure API key storage and data acquisition in one
|
|
#'
|
|
#' @param project.name The name of the current project (for key storage with
|
|
#' `keyring::key_set()`, using the default keyring)
|
|
#' @param widen.data argument to widen the exported data
|
|
#' @param uri REDCap database API uri
|
|
#' @param ... arguments passed on to `REDCapCAST::read_redcap_tables()`
|
|
#'
|
|
#' @return data.frame or list depending on widen.data
|
|
#' @export
|
|
easy_redcap <- function(project.name, widen.data = TRUE, uri, ...) {
|
|
key <- get_api_key(key.name = paste0(project.name, "_REDCAP_API"))
|
|
|
|
out <- read_redcap_tables(
|
|
uri = uri,
|
|
token = key,
|
|
...
|
|
)
|
|
|
|
if (widen.data) {
|
|
out <- out |> redcap_wider()
|
|
}
|
|
|
|
out
|
|
}
|