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1f659c5bd9
...
ae1c120cd8
@ -1,5 +1,5 @@
|
||||
Package: REDCapCAST
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||||
Title: REDCap Metadata Casting and Castellated Data Handling
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Title: REDCap Castellated Data Handling and Metadata Casting
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Version: 24.11.2
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||||
Authors@R: c(
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person("Andreas Gammelgaard", "Damsbo", email = "agdamsbo@clin.au.dk",
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6
NEWS.md
6
NEWS.md
@ -1,12 +1,12 @@
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# REDCapCAST 24.11.2
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|
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24.11.1 was rejected on CRAN based on wrong title capitalisation. This was an opportunity to extend the package overhaul. And this actually turned out to be a major step towards a very usable shiny app which have received most of the focus.
|
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24.11.1 was rejected on CRAN based on wrong title capitalisation. This was an opportunity to extend the package overhaul.
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|
||||
I have implemented option to specify categorical variables to factorize, but doing this with a modified version of {forcats} and {haven}'s `as_factor()`, that will preserve any attributes applied to the data to be able to upload and cast REDCap meta data from richly formatted data (use .rds). No matter the input type, all input is parsed using the default options from the {readr} package. Also to avoid mis-labelling, logicals are converted to factors as REDCap truefalse class follows different naming conversion compared to R. Also correct support for variable labels as field labels (use .rds formatted data and label with labelled::var_label())
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||||
Documentation has been updated. Data parser functions have been added (based on readr) and separated from the ds2dd_detailed(). Now also includes conversion of logicals to factor as REDCap truefalse class follows different naming conversion compared to R. Also correct support for variable labels as field labels (use .rds formatted data and label with labelled::var_label())
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Vignettes and documentation have been restructured.
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||||
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||||
This package has been detached from the REDCapRITS, which it was originally forked from. The data split function will be kept, while testing will be rewritten. This projects has evolved away from the original fork.
|
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This package has been detached from the REDCapRITS, which it was originally forked from. The data split function will be kept, while testing will be rewritten. This projects has evolved away from the original fork, so I think this detachment is fair.
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# REDCapCAST 24.11.1
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|
@ -56,12 +56,10 @@ io
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||||
jbi
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keyring
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labelled
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||||
labelling
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||||
mRS
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||||
matadata
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md
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mdy
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mis
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mrs
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||||
mtcars
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na
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@ -5,6 +5,6 @@ account: agdamsbo
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server: shinyapps.io
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||||
hostUrl: https://api.shinyapps.io/v1
|
||||
appId: 11351429
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||||
bundleId: 9402312
|
||||
bundleId: 9396834
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url: https://agdamsbo.shinyapps.io/redcapcast/
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version: 1
|
||||
|
330
renv.lock
330
renv.lock
@ -19,16 +19,6 @@
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],
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"Hash": "470851b6d5d0ac559e9d01bb352b4021"
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},
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||||
"RColorBrewer": {
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||||
"Package": "RColorBrewer",
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||||
"Version": "1.1-3",
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||||
"Source": "Repository",
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||||
"Repository": "CRAN",
|
||||
"Requirements": [
|
||||
"R"
|
||||
],
|
||||
"Hash": "45f0398006e83a5b10b72a90663d8d8c"
|
||||
},
|
||||
"REDCapR": {
|
||||
"Package": "REDCapR",
|
||||
"Version": "1.3.0",
|
||||
@ -60,19 +50,6 @@
|
||||
],
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||||
"Hash": "6b868847b365672d6c1677b1608da9ed"
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||||
},
|
||||
"V8": {
|
||||
"Package": "V8",
|
||||
"Version": "6.0.0",
|
||||
"Source": "Repository",
|
||||
"Repository": "CRAN",
|
||||
"Requirements": [
|
||||
"Rcpp",
|
||||
"curl",
|
||||
"jsonlite",
|
||||
"utils"
|
||||
],
|
||||
"Hash": "6603bfcbc7883a5fed41fb13042a3899"
|
||||
},
|
||||
"askpass": {
|
||||
"Package": "askpass",
|
||||
"Version": "1.2.1",
|
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@ -113,16 +90,6 @@
|
||||
],
|
||||
"Hash": "543776ae6848fde2f48ff3816d0628bc"
|
||||
},
|
||||
"bigD": {
|
||||
"Package": "bigD",
|
||||
"Version": "0.3.0",
|
||||
"Source": "Repository",
|
||||
"Repository": "CRAN",
|
||||
"Requirements": [
|
||||
"R"
|
||||
],
|
||||
"Hash": "78dfe2b21e523358871eea1601b04b56"
|
||||
},
|
||||
"bit": {
|
||||
"Package": "bit",
|
||||
"Version": "4.5.0",
|
||||
@ -147,13 +114,6 @@
|
||||
],
|
||||
"Hash": "e84984bf5f12a18628d9a02322128dfd"
|
||||
},
|
||||
"bitops": {
|
||||
"Package": "bitops",
|
||||
"Version": "1.0-9",
|
||||
"Source": "Repository",
|
||||
"Repository": "CRAN",
|
||||
"Hash": "d972ef991d58c19e6efa71b21f5e144b"
|
||||
},
|
||||
"bslib": {
|
||||
"Package": "bslib",
|
||||
"Version": "0.8.0",
|
||||
@ -232,20 +192,6 @@
|
||||
],
|
||||
"Hash": "3f038e5ac7f41d4ac41ce658c85e3042"
|
||||
},
|
||||
"colorspace": {
|
||||
"Package": "colorspace",
|
||||
"Version": "2.1-1",
|
||||
"Source": "Repository",
|
||||
"Repository": "CRAN",
|
||||
"Requirements": [
|
||||
"R",
|
||||
"grDevices",
|
||||
"graphics",
|
||||
"methods",
|
||||
"stats"
|
||||
],
|
||||
"Hash": "d954cb1c57e8d8b756165d7ba18aa55a"
|
||||
},
|
||||
"commonmark": {
|
||||
"Package": "commonmark",
|
||||
"Version": "1.9.2",
|
||||
@ -319,16 +265,6 @@
|
||||
],
|
||||
"Hash": "fedd9d00c2944ff00a0e2696ccf048ec"
|
||||
},
|
||||
"evaluate": {
|
||||
"Package": "evaluate",
|
||||
"Version": "1.0.1",
|
||||
"Source": "Repository",
|
||||
"Repository": "CRAN",
|
||||
"Requirements": [
|
||||
"R"
|
||||
],
|
||||
"Hash": "3fd29944b231036ad67c3edb32e02201"
|
||||
},
|
||||
"fansi": {
|
||||
"Package": "fansi",
|
||||
"Version": "1.0.6",
|
||||
@ -341,13 +277,6 @@
|
||||
],
|
||||
"Hash": "962174cf2aeb5b9eea581522286a911f"
|
||||
},
|
||||
"farver": {
|
||||
"Package": "farver",
|
||||
"Version": "2.1.2",
|
||||
"Source": "Repository",
|
||||
"Repository": "CRAN",
|
||||
"Hash": "680887028577f3fa2a81e410ed0d6e42"
|
||||
},
|
||||
"fastmap": {
|
||||
"Package": "fastmap",
|
||||
"Version": "1.2.0",
|
||||
@ -367,7 +296,7 @@
|
||||
},
|
||||
"fontawesome": {
|
||||
"Package": "fontawesome",
|
||||
"Version": "0.5.3",
|
||||
"Version": "0.5.2",
|
||||
"Source": "Repository",
|
||||
"Repository": "CRAN",
|
||||
"Requirements": [
|
||||
@ -375,7 +304,7 @@
|
||||
"htmltools",
|
||||
"rlang"
|
||||
],
|
||||
"Hash": "bd1297f9b5b1fc1372d19e2c4cd82215"
|
||||
"Hash": "c2efdd5f0bcd1ea861c2d4e2a883a67d"
|
||||
},
|
||||
"forcats": {
|
||||
"Package": "forcats",
|
||||
@ -426,36 +355,6 @@
|
||||
],
|
||||
"Hash": "5899f1eaa825580172bb56c08266f37c"
|
||||
},
|
||||
"gt": {
|
||||
"Package": "gt",
|
||||
"Version": "0.11.1",
|
||||
"Source": "Repository",
|
||||
"Repository": "CRAN",
|
||||
"Requirements": [
|
||||
"R",
|
||||
"base64enc",
|
||||
"bigD",
|
||||
"bitops",
|
||||
"cli",
|
||||
"commonmark",
|
||||
"dplyr",
|
||||
"fs",
|
||||
"glue",
|
||||
"htmltools",
|
||||
"htmlwidgets",
|
||||
"juicyjuice",
|
||||
"magrittr",
|
||||
"markdown",
|
||||
"reactable",
|
||||
"rlang",
|
||||
"sass",
|
||||
"scales",
|
||||
"tidyselect",
|
||||
"vctrs",
|
||||
"xml2"
|
||||
],
|
||||
"Hash": "3170d1f0f45e531c241179ab57cd30bd"
|
||||
},
|
||||
"haven": {
|
||||
"Package": "haven",
|
||||
"Version": "2.5.4",
|
||||
@ -477,27 +376,6 @@
|
||||
],
|
||||
"Hash": "9171f898db9d9c4c1b2c745adc2c1ef1"
|
||||
},
|
||||
"here": {
|
||||
"Package": "here",
|
||||
"Version": "1.0.1",
|
||||
"Source": "Repository",
|
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"Repository": "CRAN",
|
||||
"Requirements": [
|
||||
"rprojroot"
|
||||
],
|
||||
"Hash": "24b224366f9c2e7534d2344d10d59211"
|
||||
},
|
||||
"highr": {
|
||||
"Package": "highr",
|
||||
"Version": "0.11",
|
||||
"Source": "Repository",
|
||||
"Repository": "CRAN",
|
||||
"Requirements": [
|
||||
"R",
|
||||
"xfun"
|
||||
],
|
||||
"Hash": "d65ba49117ca223614f71b60d85b8ab7"
|
||||
},
|
||||
"hms": {
|
||||
"Package": "hms",
|
||||
"Version": "1.1.3",
|
||||
@ -528,21 +406,6 @@
|
||||
],
|
||||
"Hash": "81d371a9cc60640e74e4ab6ac46dcedc"
|
||||
},
|
||||
"htmlwidgets": {
|
||||
"Package": "htmlwidgets",
|
||||
"Version": "1.6.4",
|
||||
"Source": "Repository",
|
||||
"Repository": "CRAN",
|
||||
"Requirements": [
|
||||
"grDevices",
|
||||
"htmltools",
|
||||
"jsonlite",
|
||||
"knitr",
|
||||
"rmarkdown",
|
||||
"yaml"
|
||||
],
|
||||
"Hash": "04291cc45198225444a397606810ac37"
|
||||
},
|
||||
"httpuv": {
|
||||
"Package": "httpuv",
|
||||
"Version": "1.6.15",
|
||||
@ -593,16 +456,6 @@
|
||||
],
|
||||
"Hash": "4e993b65c2c3ffbffce7bb3e2c6f832b"
|
||||
},
|
||||
"juicyjuice": {
|
||||
"Package": "juicyjuice",
|
||||
"Version": "0.1.0",
|
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"Source": "Repository",
|
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"Repository": "CRAN",
|
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"Requirements": [
|
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"V8"
|
||||
],
|
||||
"Hash": "3bcd11943da509341838da9399e18bce"
|
||||
},
|
||||
"keyring": {
|
||||
"Package": "keyring",
|
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"Version": "1.3.2",
|
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@ -623,33 +476,6 @@
|
||||
],
|
||||
"Hash": "5cd8cfb2e90c57110b7dd1785c599aba"
|
||||
},
|
||||
"knitr": {
|
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"Package": "knitr",
|
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"Version": "1.49",
|
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"Source": "Repository",
|
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"Repository": "CRAN",
|
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"Requirements": [
|
||||
"R",
|
||||
"evaluate",
|
||||
"highr",
|
||||
"methods",
|
||||
"tools",
|
||||
"xfun",
|
||||
"yaml"
|
||||
],
|
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"Hash": "9fcb189926d93c636dea94fbe4f44480"
|
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|
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"labeling": {
|
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"Package": "labeling",
|
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"Version": "0.4.3",
|
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"Source": "Repository",
|
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"Repository": "CRAN",
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"Requirements": [
|
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"graphics",
|
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"stats"
|
||||
],
|
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"Hash": "b64ec208ac5bc1852b285f665d6368b3"
|
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|
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|
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|
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@ -684,19 +510,6 @@
|
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|
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|
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|
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|
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|
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|
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"xfun"
|
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|
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|
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|
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@ -730,17 +543,6 @@
|
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|
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|
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|
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|
||||
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|
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|
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|
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|
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|
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"methods"
|
||||
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|
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|
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|
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|
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|
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|
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@ -753,7 +555,7 @@
|
||||
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|
||||
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|
||||
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|
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|
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|
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|
||||
@ -766,7 +568,7 @@
|
||||
"utils",
|
||||
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|
||||
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|
||||
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|
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|
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|
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|
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|
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@ -860,31 +662,6 @@
|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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@ -954,39 +731,6 @@
|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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@ -1001,26 +745,6 @@
|
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|
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|
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
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|
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|
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|
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@ -1166,16 +890,6 @@
|
||||
],
|
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|
||||
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|
||||
"tinytex": {
|
||||
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|
||||
"Version": "0.54",
|
||||
"Source": "Repository",
|
||||
"Repository": "CRAN",
|
||||
"Requirements": [
|
||||
"xfun"
|
||||
],
|
||||
"Hash": "3ec7e3ddcacc2d34a9046941222bf94d"
|
||||
},
|
||||
"tzdb": {
|
||||
"Package": "tzdb",
|
||||
"Version": "0.4.0",
|
||||
@ -1211,16 +925,6 @@
|
||||
],
|
||||
"Hash": "c03fa420630029418f7e6da3667aac4a"
|
||||
},
|
||||
"viridisLite": {
|
||||
"Package": "viridisLite",
|
||||
"Version": "0.4.2",
|
||||
"Source": "Repository",
|
||||
"Repository": "CRAN",
|
||||
"Requirements": [
|
||||
"R"
|
||||
],
|
||||
"Hash": "c826c7c4241b6fc89ff55aaea3fa7491"
|
||||
},
|
||||
"vroom": {
|
||||
"Package": "vroom",
|
||||
"Version": "1.6.5",
|
||||
@ -1259,32 +963,6 @@
|
||||
],
|
||||
"Hash": "cc2d62c76458d425210d1eb1478b30b4"
|
||||
},
|
||||
"xfun": {
|
||||
"Package": "xfun",
|
||||
"Version": "0.49",
|
||||
"Source": "Repository",
|
||||
"Repository": "CRAN",
|
||||
"Requirements": [
|
||||
"R",
|
||||
"grDevices",
|
||||
"stats",
|
||||
"tools"
|
||||
],
|
||||
"Hash": "8687398773806cfff9401a2feca96298"
|
||||
},
|
||||
"xml2": {
|
||||
"Package": "xml2",
|
||||
"Version": "1.3.6",
|
||||
"Source": "Repository",
|
||||
"Repository": "CRAN",
|
||||
"Requirements": [
|
||||
"R",
|
||||
"cli",
|
||||
"methods",
|
||||
"rlang"
|
||||
],
|
||||
"Hash": "1d0336142f4cd25d8d23cd3ba7a8fb61"
|
||||
},
|
||||
"xtable": {
|
||||
"Package": "xtable",
|
||||
"Version": "1.8-4",
|
||||
|
Loading…
Reference in New Issue
Block a user