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@ -98,23 +98,23 @@ demonstration of the functions.</p>
</h2> </h2>
<div class="sourceCode" id="cb2"><pre class="downlit sourceCode r"> <div class="sourceCode" id="cb2"><pre class="downlit sourceCode r">
<code class="sourceCode R"><span><span class="va">redcapcast_data</span> <span class="op">|&gt;</span> <span class="fu">gt</span><span class="fu">::</span><span class="fu"><a href="https://gt.rstudio.com/reference/gt.html" class="external-link">gt</a></span><span class="op">(</span><span class="op">)</span></span></code></pre></div> <code class="sourceCode R"><span><span class="va">redcapcast_data</span> <span class="op">|&gt;</span> <span class="fu">gt</span><span class="fu">::</span><span class="fu"><a href="https://gt.rstudio.com/reference/gt.html" class="external-link">gt</a></span><span class="op">(</span><span class="op">)</span></span></code></pre></div>
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@ -140,12 +140,12 @@ demonstration of the functions.</p>
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@ -157,7 +157,7 @@ demonstration of the functions.</p>
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@ -169,7 +169,7 @@ demonstration of the functions.</p>
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@ -181,13 +181,13 @@ demonstration of the functions.</p>
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@ -234,15 +234,15 @@ demonstration of the functions.</p>
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@ -254,11 +254,11 @@ demonstration of the functions.</p>
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@ -299,15 +299,15 @@ demonstration of the functions.</p>
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@ -326,7 +326,7 @@ demonstration of the functions.</p>
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@ -353,15 +353,15 @@ demonstration of the functions.</p>
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@ -371,16 +371,16 @@ demonstration of the functions.</p>
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@ -390,7 +390,7 @@ demonstration of the functions.</p>
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@ -410,7 +410,7 @@ demonstration of the functions.</p>
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@ -420,11 +420,11 @@ demonstration of the functions.</p>
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@ -447,7 +447,7 @@ demonstration of the functions.</p>
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@ -470,7 +470,7 @@ demonstration of the functions.</p>
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@ -478,63 +478,63 @@ demonstration of the functions.</p>
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</style> </style>
@ -561,6 +561,7 @@ demonstration of the functions.</p>
<th class="gt_col_heading gt_columns_bottom_border gt_right" rowspan="1" colspan="1" scope="col" id="mrs_score">mrs_score</th> <th class="gt_col_heading gt_columns_bottom_border gt_right" rowspan="1" colspan="1" scope="col" id="mrs_score">mrs_score</th>
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="mrs_complete">mrs_complete</th> <th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="mrs_complete">mrs_complete</th>
<th class="gt_col_heading gt_columns_bottom_border gt_right" rowspan="1" colspan="1" scope="col" id="event_datetime">event_datetime</th> <th class="gt_col_heading gt_columns_bottom_border gt_right" rowspan="1" colspan="1" scope="col" id="event_datetime">event_datetime</th>
<th class="gt_col_heading gt_columns_bottom_border gt_center" rowspan="1" colspan="1" scope="col" id="event_age">event_age</th>
<th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="event_type">event_type</th> <th class="gt_col_heading gt_columns_bottom_border gt_left" rowspan="1" colspan="1" scope="col" id="event_type">event_type</th>
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</tr></thead> </tr></thead>
@ -587,6 +588,7 @@ demonstration of the functions.</p>
<td headers="mrs_score" class="gt_row gt_right">1</td> <td headers="mrs_score" class="gt_row gt_right">1</td>
<td headers="mrs_complete" class="gt_row gt_left">Incomplete</td> <td headers="mrs_complete" class="gt_row gt_left">Incomplete</td>
<td headers="event_datetime" class="gt_row gt_right">NA</td> <td headers="event_datetime" class="gt_row gt_right">NA</td>
<td headers="event_age" class="gt_row gt_center">NA</td>
<td headers="event_type" class="gt_row gt_left">NA</td> <td headers="event_type" class="gt_row gt_left">NA</td>
<td headers="new_event_complete" class="gt_row gt_left">NA</td> <td headers="new_event_complete" class="gt_row gt_left">NA</td>
</tr> </tr>
@ -612,6 +614,7 @@ demonstration of the functions.</p>
<td headers="mrs_score" class="gt_row gt_right">1</td> <td headers="mrs_score" class="gt_row gt_right">1</td>
<td headers="mrs_complete" class="gt_row gt_left">Incomplete</td> <td headers="mrs_complete" class="gt_row gt_left">Incomplete</td>
<td headers="event_datetime" class="gt_row gt_right">NA</td> <td headers="event_datetime" class="gt_row gt_right">NA</td>
<td headers="event_age" class="gt_row gt_center">NA</td>
<td headers="event_type" class="gt_row gt_left">NA</td> <td headers="event_type" class="gt_row gt_left">NA</td>
<td headers="new_event_complete" class="gt_row gt_left">NA</td> <td headers="new_event_complete" class="gt_row gt_left">NA</td>
</tr> </tr>
@ -637,6 +640,7 @@ demonstration of the functions.</p>
<td headers="mrs_score" class="gt_row gt_right">3</td> <td headers="mrs_score" class="gt_row gt_right">3</td>
<td headers="mrs_complete" class="gt_row gt_left">Incomplete</td> <td headers="mrs_complete" class="gt_row gt_left">Incomplete</td>
<td headers="event_datetime" class="gt_row gt_right">NA</td> <td headers="event_datetime" class="gt_row gt_right">NA</td>
<td headers="event_age" class="gt_row gt_center">NA</td>
<td headers="event_type" class="gt_row gt_left">NA</td> <td headers="event_type" class="gt_row gt_left">NA</td>
<td headers="new_event_complete" class="gt_row gt_left">NA</td> <td headers="new_event_complete" class="gt_row gt_left">NA</td>
</tr> </tr>
@ -662,6 +666,7 @@ demonstration of the functions.</p>
<td headers="mrs_score" class="gt_row gt_right">NA</td> <td headers="mrs_score" class="gt_row gt_right">NA</td>
<td headers="mrs_complete" class="gt_row gt_left">NA</td> <td headers="mrs_complete" class="gt_row gt_left">NA</td>
<td headers="event_datetime" class="gt_row gt_right">2024-01-18 12:49:42</td> <td headers="event_datetime" class="gt_row gt_right">2024-01-18 12:49:42</td>
<td headers="event_age" class="gt_row gt_center">NA</td>
<td headers="event_type" class="gt_row gt_left">TIA</td> <td headers="event_type" class="gt_row gt_left">TIA</td>
<td headers="new_event_complete" class="gt_row gt_left">Incomplete</td> <td headers="new_event_complete" class="gt_row gt_left">Incomplete</td>
</tr> </tr>
@ -687,6 +692,7 @@ demonstration of the functions.</p>
<td headers="mrs_score" class="gt_row gt_right">NA</td> <td headers="mrs_score" class="gt_row gt_right">NA</td>
<td headers="mrs_complete" class="gt_row gt_left">Incomplete</td> <td headers="mrs_complete" class="gt_row gt_left">Incomplete</td>
<td headers="event_datetime" class="gt_row gt_right">NA</td> <td headers="event_datetime" class="gt_row gt_right">NA</td>
<td headers="event_age" class="gt_row gt_center">NA</td>
<td headers="event_type" class="gt_row gt_left">NA</td> <td headers="event_type" class="gt_row gt_left">NA</td>
<td headers="new_event_complete" class="gt_row gt_left">NA</td> <td headers="new_event_complete" class="gt_row gt_left">NA</td>
</tr> </tr>
@ -712,6 +718,7 @@ demonstration of the functions.</p>
<td headers="mrs_score" class="gt_row gt_right">2</td> <td headers="mrs_score" class="gt_row gt_right">2</td>
<td headers="mrs_complete" class="gt_row gt_left">Incomplete</td> <td headers="mrs_complete" class="gt_row gt_left">Incomplete</td>
<td headers="event_datetime" class="gt_row gt_right">NA</td> <td headers="event_datetime" class="gt_row gt_right">NA</td>
<td headers="event_age" class="gt_row gt_center">NA</td>
<td headers="event_type" class="gt_row gt_left">NA</td> <td headers="event_type" class="gt_row gt_left">NA</td>
<td headers="new_event_complete" class="gt_row gt_left">NA</td> <td headers="new_event_complete" class="gt_row gt_left">NA</td>
</tr> </tr>
@ -737,6 +744,7 @@ demonstration of the functions.</p>
<td headers="mrs_score" class="gt_row gt_right">1</td> <td headers="mrs_score" class="gt_row gt_right">1</td>
<td headers="mrs_complete" class="gt_row gt_left">Incomplete</td> <td headers="mrs_complete" class="gt_row gt_left">Incomplete</td>
<td headers="event_datetime" class="gt_row gt_right">NA</td> <td headers="event_datetime" class="gt_row gt_right">NA</td>
<td headers="event_age" class="gt_row gt_center">NA</td>
<td headers="event_type" class="gt_row gt_left">NA</td> <td headers="event_type" class="gt_row gt_left">NA</td>
<td headers="new_event_complete" class="gt_row gt_left">NA</td> <td headers="new_event_complete" class="gt_row gt_left">NA</td>
</tr> </tr>
@ -762,6 +770,7 @@ demonstration of the functions.</p>
<td headers="mrs_score" class="gt_row gt_right">NA</td> <td headers="mrs_score" class="gt_row gt_right">NA</td>
<td headers="mrs_complete" class="gt_row gt_left">NA</td> <td headers="mrs_complete" class="gt_row gt_left">NA</td>
<td headers="event_datetime" class="gt_row gt_right">2024-01-18 12:49:58</td> <td headers="event_datetime" class="gt_row gt_right">2024-01-18 12:49:58</td>
<td headers="event_age" class="gt_row gt_center">NA</td>
<td headers="event_type" class="gt_row gt_left">AIS</td> <td headers="event_type" class="gt_row gt_left">AIS</td>
<td headers="new_event_complete" class="gt_row gt_left">Incomplete</td> <td headers="new_event_complete" class="gt_row gt_left">Incomplete</td>
</tr> </tr>
@ -787,6 +796,7 @@ demonstration of the functions.</p>
<td headers="mrs_score" class="gt_row gt_right">NA</td> <td headers="mrs_score" class="gt_row gt_right">NA</td>
<td headers="mrs_complete" class="gt_row gt_left">NA</td> <td headers="mrs_complete" class="gt_row gt_left">NA</td>
<td headers="event_datetime" class="gt_row gt_right">2024-01-18 12:50:01</td> <td headers="event_datetime" class="gt_row gt_right">2024-01-18 12:50:01</td>
<td headers="event_age" class="gt_row gt_center">NA</td>
<td headers="event_type" class="gt_row gt_left">ICH</td> <td headers="event_type" class="gt_row gt_left">ICH</td>
<td headers="new_event_complete" class="gt_row gt_left">Incomplete</td> <td headers="new_event_complete" class="gt_row gt_left">Incomplete</td>
</tr> </tr>
@ -812,6 +822,7 @@ demonstration of the functions.</p>
<td headers="mrs_score" class="gt_row gt_right">NA</td> <td headers="mrs_score" class="gt_row gt_right">NA</td>
<td headers="mrs_complete" class="gt_row gt_left">NA</td> <td headers="mrs_complete" class="gt_row gt_left">NA</td>
<td headers="event_datetime" class="gt_row gt_right">2024-01-18 12:50:05</td> <td headers="event_datetime" class="gt_row gt_right">2024-01-18 12:50:05</td>
<td headers="event_age" class="gt_row gt_center">NA</td>
<td headers="event_type" class="gt_row gt_left">ICH</td> <td headers="event_type" class="gt_row gt_left">ICH</td>
<td headers="new_event_complete" class="gt_row gt_left">Incomplete</td> <td headers="new_event_complete" class="gt_row gt_left">Incomplete</td>
</tr> </tr>
@ -837,6 +848,7 @@ demonstration of the functions.</p>
<td headers="mrs_score" class="gt_row gt_right">NA</td> <td headers="mrs_score" class="gt_row gt_right">NA</td>
<td headers="mrs_complete" class="gt_row gt_left">NA</td> <td headers="mrs_complete" class="gt_row gt_left">NA</td>
<td headers="event_datetime" class="gt_row gt_right">2024-01-18 12:50:07</td> <td headers="event_datetime" class="gt_row gt_right">2024-01-18 12:50:07</td>
<td headers="event_age" class="gt_row gt_center">NA</td>
<td headers="event_type" class="gt_row gt_left">TIA</td> <td headers="event_type" class="gt_row gt_left">TIA</td>
<td headers="new_event_complete" class="gt_row gt_left">Incomplete</td> <td headers="new_event_complete" class="gt_row gt_left">Incomplete</td>
</tr> </tr>
@ -862,6 +874,7 @@ demonstration of the functions.</p>
<td headers="mrs_score" class="gt_row gt_right">NA</td> <td headers="mrs_score" class="gt_row gt_right">NA</td>
<td headers="mrs_complete" class="gt_row gt_left">NA</td> <td headers="mrs_complete" class="gt_row gt_left">NA</td>
<td headers="event_datetime" class="gt_row gt_right">2024-01-18 12:50:09</td> <td headers="event_datetime" class="gt_row gt_right">2024-01-18 12:50:09</td>
<td headers="event_age" class="gt_row gt_center">NA</td>
<td headers="event_type" class="gt_row gt_left">AIS</td> <td headers="event_type" class="gt_row gt_left">AIS</td>
<td headers="new_event_complete" class="gt_row gt_left">Incomplete</td> <td headers="new_event_complete" class="gt_row gt_left">Incomplete</td>
</tr> </tr>
@ -887,6 +900,7 @@ demonstration of the functions.</p>
<td headers="mrs_score" class="gt_row gt_right">NA</td> <td headers="mrs_score" class="gt_row gt_right">NA</td>
<td headers="mrs_complete" class="gt_row gt_left">Incomplete</td> <td headers="mrs_complete" class="gt_row gt_left">Incomplete</td>
<td headers="event_datetime" class="gt_row gt_right">NA</td> <td headers="event_datetime" class="gt_row gt_right">NA</td>
<td headers="event_age" class="gt_row gt_center">NA</td>
<td headers="event_type" class="gt_row gt_left">NA</td> <td headers="event_type" class="gt_row gt_left">NA</td>
<td headers="new_event_complete" class="gt_row gt_left">NA</td> <td headers="new_event_complete" class="gt_row gt_left">NA</td>
</tr> </tr>
@ -912,6 +926,7 @@ demonstration of the functions.</p>
<td headers="mrs_score" class="gt_row gt_right">NA</td> <td headers="mrs_score" class="gt_row gt_right">NA</td>
<td headers="mrs_complete" class="gt_row gt_left">Incomplete</td> <td headers="mrs_complete" class="gt_row gt_left">Incomplete</td>
<td headers="event_datetime" class="gt_row gt_right">NA</td> <td headers="event_datetime" class="gt_row gt_right">NA</td>
<td headers="event_age" class="gt_row gt_center">NA</td>
<td headers="event_type" class="gt_row gt_left">NA</td> <td headers="event_type" class="gt_row gt_left">NA</td>
<td headers="new_event_complete" class="gt_row gt_left">NA</td> <td headers="new_event_complete" class="gt_row gt_left">NA</td>
</tr> </tr>
@ -937,6 +952,7 @@ demonstration of the functions.</p>
<td headers="mrs_score" class="gt_row gt_right">NA</td> <td headers="mrs_score" class="gt_row gt_right">NA</td>
<td headers="mrs_complete" class="gt_row gt_left">NA</td> <td headers="mrs_complete" class="gt_row gt_left">NA</td>
<td headers="event_datetime" class="gt_row gt_right">2024-01-18 12:50:19</td> <td headers="event_datetime" class="gt_row gt_right">2024-01-18 12:50:19</td>
<td headers="event_age" class="gt_row gt_center">NA</td>
<td headers="event_type" class="gt_row gt_left">AIS</td> <td headers="event_type" class="gt_row gt_left">AIS</td>
<td headers="new_event_complete" class="gt_row gt_left">Complete</td> <td headers="new_event_complete" class="gt_row gt_left">Complete</td>
</tr> </tr>
@ -962,6 +978,7 @@ demonstration of the functions.</p>
<td headers="mrs_score" class="gt_row gt_right">NA</td> <td headers="mrs_score" class="gt_row gt_right">NA</td>
<td headers="mrs_complete" class="gt_row gt_left">NA</td> <td headers="mrs_complete" class="gt_row gt_left">NA</td>
<td headers="event_datetime" class="gt_row gt_right">2024-01-18 12:50:22</td> <td headers="event_datetime" class="gt_row gt_right">2024-01-18 12:50:22</td>
<td headers="event_age" class="gt_row gt_center">NA</td>
<td headers="event_type" class="gt_row gt_left">ICH</td> <td headers="event_type" class="gt_row gt_left">ICH</td>
<td headers="new_event_complete" class="gt_row gt_left">Incomplete</td> <td headers="new_event_complete" class="gt_row gt_left">Incomplete</td>
</tr> </tr>
@ -987,6 +1004,7 @@ demonstration of the functions.</p>
<td headers="mrs_score" class="gt_row gt_right">NA</td> <td headers="mrs_score" class="gt_row gt_right">NA</td>
<td headers="mrs_complete" class="gt_row gt_left">NA</td> <td headers="mrs_complete" class="gt_row gt_left">NA</td>
<td headers="event_datetime" class="gt_row gt_right">2024-01-18 12:50:24</td> <td headers="event_datetime" class="gt_row gt_right">2024-01-18 12:50:24</td>
<td headers="event_age" class="gt_row gt_center">NA</td>
<td headers="event_type" class="gt_row gt_left">Unknown</td> <td headers="event_type" class="gt_row gt_left">Unknown</td>
<td headers="new_event_complete" class="gt_row gt_left">Complete</td> <td headers="new_event_complete" class="gt_row gt_left">Complete</td>
</tr> </tr>
@ -1012,6 +1030,33 @@ demonstration of the functions.</p>
<td headers="mrs_score" class="gt_row gt_right">NA</td> <td headers="mrs_score" class="gt_row gt_right">NA</td>
<td headers="mrs_complete" class="gt_row gt_left">Incomplete</td> <td headers="mrs_complete" class="gt_row gt_left">Incomplete</td>
<td headers="event_datetime" class="gt_row gt_right">NA</td> <td headers="event_datetime" class="gt_row gt_right">NA</td>
<td headers="event_age" class="gt_row gt_center">NA</td>
<td headers="event_type" class="gt_row gt_left">NA</td>
<td headers="new_event_complete" class="gt_row gt_left">NA</td>
</tr>
<tr>
<td headers="record_id" class="gt_row gt_right">6</td>
<td headers="redcap_event_name" class="gt_row gt_left">inclusion</td>
<td headers="redcap_repeat_instrument" class="gt_row gt_left">NA</td>
<td headers="redcap_repeat_instance" class="gt_row gt_right">NA</td>
<td headers="cpr" class="gt_row gt_left">1202320122</td>
<td headers="inclusion" class="gt_row gt_right">2024-01-25</td>
<td headers="inclusion_time" class="gt_row gt_center">08:49:28</td>
<td headers="dob" class="gt_row gt_right">1932-02-12</td>
<td headers="age" class="gt_row gt_right">91.95261</td>
<td headers="age_integer" class="gt_row gt_right">91</td>
<td headers="sex" class="gt_row gt_left">female</td>
<td headers="cohabitation" class="gt_row gt_left">No</td>
<td headers="hypertension" class="gt_row gt_left">Yes</td>
<td headers="diabetes" class="gt_row gt_left">No</td>
<td headers="region" class="gt_row gt_left">East</td>
<td headers="baseline_data_start_complete" class="gt_row gt_left">Complete</td>
<td headers="mrs_assessed" class="gt_row gt_left">NA</td>
<td headers="mrs_date" class="gt_row gt_right">NA</td>
<td headers="mrs_score" class="gt_row gt_right">NA</td>
<td headers="mrs_complete" class="gt_row gt_left">Incomplete</td>
<td headers="event_datetime" class="gt_row gt_right">NA</td>
<td headers="event_age" class="gt_row gt_center">NA</td>
<td headers="event_type" class="gt_row gt_left">NA</td> <td headers="event_type" class="gt_row gt_left">NA</td>
<td headers="new_event_complete" class="gt_row gt_left">NA</td> <td headers="new_event_complete" class="gt_row gt_left">NA</td>
</tr> </tr>
@ -1020,23 +1065,23 @@ demonstration of the functions.</p>
</div> </div>
<div class="sourceCode" id="cb3"><pre class="downlit sourceCode r"> <div class="sourceCode" id="cb3"><pre class="downlit sourceCode r">
<code class="sourceCode R"><span><span class="va">redcapcast_meta</span> <span class="op">|&gt;</span> <span class="fu">gt</span><span class="fu">::</span><span class="fu"><a href="https://gt.rstudio.com/reference/gt.html" class="external-link">gt</a></span><span class="op">(</span><span class="op">)</span></span></code></pre></div> <code class="sourceCode R"><span><span class="va">redcapcast_meta</span> <span class="op">|&gt;</span> <span class="fu">gt</span><span class="fu">::</span><span class="fu"><a href="https://gt.rstudio.com/reference/gt.html" class="external-link">gt</a></span><span class="op">(</span><span class="op">)</span></span></code></pre></div>
<div id="lpuybuuknr" style="padding-left:0px;padding-right:0px;padding-top:10px;padding-bottom:10px;overflow-x:auto;overflow-y:auto;width:auto;height:auto;"> <div id="azsgiyvwga" style="padding-left:0px;padding-right:0px;padding-top:10px;padding-bottom:10px;overflow-x:auto;overflow-y:auto;width:auto;height:auto;">
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@ -1062,12 +1107,12 @@ demonstration of the functions.</p>
border-left-color: #D3D3D3; border-left-color: #D3D3D3;
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font-size: 125%; font-size: 125%;
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@ -1079,7 +1124,7 @@ demonstration of the functions.</p>
border-bottom-width: 0; border-bottom-width: 0;
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#lpuybuuknr .gt_subtitle { #azsgiyvwga .gt_subtitle {
color: #333333; color: #333333;
font-size: 85%; font-size: 85%;
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@ -1091,7 +1136,7 @@ demonstration of the functions.</p>
border-top-width: 0; border-top-width: 0;
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background-color: #FFFFFF; background-color: #FFFFFF;
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@ -1103,13 +1148,13 @@ demonstration of the functions.</p>
border-right-color: #D3D3D3; border-right-color: #D3D3D3;
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@ -1124,7 +1169,7 @@ demonstration of the functions.</p>
border-right-color: #D3D3D3; border-right-color: #D3D3D3;
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color: #333333; color: #333333;
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@ -1144,7 +1189,7 @@ demonstration of the functions.</p>
overflow-x: hidden; overflow-x: hidden;
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@ -1156,15 +1201,15 @@ demonstration of the functions.</p>
padding-right: 4px; padding-right: 4px;
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border-bottom-style: solid; border-bottom-style: solid;
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@ -1176,11 +1221,11 @@ demonstration of the functions.</p>
width: 100%; width: 100%;
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padding-left: 5px; padding-left: 5px;
@ -1206,7 +1251,7 @@ demonstration of the functions.</p>
text-align: left; text-align: left;
} }
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padding: 0.5px; padding: 0.5px;
color: #333333; color: #333333;
background-color: #FFFFFF; background-color: #FFFFFF;
@ -1221,15 +1266,15 @@ demonstration of the functions.</p>
vertical-align: middle; vertical-align: middle;
} }
#lpuybuuknr .gt_from_md > :first-child { #azsgiyvwga .gt_from_md > :first-child {
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@ -1248,7 +1293,7 @@ demonstration of the functions.</p>
overflow-x: hidden; overflow-x: hidden;
} }
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color: #333333; color: #333333;
background-color: #FFFFFF; background-color: #FFFFFF;
font-size: 100%; font-size: 100%;
@ -1261,7 +1306,7 @@ demonstration of the functions.</p>
padding-right: 5px; padding-right: 5px;
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color: #333333; color: #333333;
background-color: #FFFFFF; background-color: #FFFFFF;
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@ -1275,15 +1320,15 @@ demonstration of the functions.</p>
vertical-align: top; vertical-align: top;
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@ -1293,16 +1338,16 @@ demonstration of the functions.</p>
padding-right: 5px; padding-right: 5px;
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@ -1312,7 +1357,7 @@ demonstration of the functions.</p>
border-bottom-color: #D3D3D3; border-bottom-color: #D3D3D3;
} }
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@ -1322,7 +1367,7 @@ demonstration of the functions.</p>
padding-right: 5px; padding-right: 5px;
} }
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padding-top: 8px; padding-top: 8px;
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padding-left: 5px; padding-left: 5px;
@ -1332,7 +1377,7 @@ demonstration of the functions.</p>
border-top-color: #D3D3D3; border-top-color: #D3D3D3;
} }
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padding-left: 5px; padding-left: 5px;
@ -1342,11 +1387,11 @@ demonstration of the functions.</p>
border-bottom-color: #D3D3D3; border-bottom-color: #D3D3D3;
} }
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@ -1355,7 +1400,7 @@ demonstration of the functions.</p>
border-bottom-color: #D3D3D3; border-bottom-color: #D3D3D3;
} }
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@ -1369,7 +1414,7 @@ demonstration of the functions.</p>
border-right-color: #D3D3D3; border-right-color: #D3D3D3;
} }
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@ -1378,7 +1423,7 @@ demonstration of the functions.</p>
padding-right: 5px; padding-right: 5px;
} }
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color: #333333; color: #333333;
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border-bottom-style: none; border-bottom-style: none;
@ -1392,7 +1437,7 @@ demonstration of the functions.</p>
border-right-color: #D3D3D3; border-right-color: #D3D3D3;
} }
#lpuybuuknr .gt_sourcenote { #azsgiyvwga .gt_sourcenote {
font-size: 90%; font-size: 90%;
padding-top: 4px; padding-top: 4px;
padding-bottom: 4px; padding-bottom: 4px;
@ -1400,63 +1445,63 @@ demonstration of the functions.</p>
padding-right: 5px; padding-right: 5px;
} }
#lpuybuuknr .gt_left { #azsgiyvwga .gt_left {
text-align: left; text-align: left;
} }
#lpuybuuknr .gt_center { #azsgiyvwga .gt_center {
text-align: center; text-align: center;
} }
#lpuybuuknr .gt_right { #azsgiyvwga .gt_right {
text-align: right; text-align: right;
font-variant-numeric: tabular-nums; font-variant-numeric: tabular-nums;
} }
#lpuybuuknr .gt_font_normal { #azsgiyvwga .gt_font_normal {
font-weight: normal; font-weight: normal;
} }
#lpuybuuknr .gt_font_bold { #azsgiyvwga .gt_font_bold {
font-weight: bold; font-weight: bold;
} }
#lpuybuuknr .gt_font_italic { #azsgiyvwga .gt_font_italic {
font-style: italic; font-style: italic;
} }
#lpuybuuknr .gt_super { #azsgiyvwga .gt_super {
font-size: 65%; font-size: 65%;
} }
#lpuybuuknr .gt_footnote_marks { #azsgiyvwga .gt_footnote_marks {
font-size: 75%; font-size: 75%;
vertical-align: 0.4em; vertical-align: 0.4em;
position: initial; position: initial;
} }
#lpuybuuknr .gt_asterisk { #azsgiyvwga .gt_asterisk {
font-size: 100%; font-size: 100%;
vertical-align: 0; vertical-align: 0;
} }
#lpuybuuknr .gt_indent_1 { #azsgiyvwga .gt_indent_1 {
text-indent: 5px; text-indent: 5px;
} }
#lpuybuuknr .gt_indent_2 { #azsgiyvwga .gt_indent_2 {
text-indent: 10px; text-indent: 10px;
} }
#lpuybuuknr .gt_indent_3 { #azsgiyvwga .gt_indent_3 {
text-indent: 15px; text-indent: 15px;
} }
#lpuybuuknr .gt_indent_4 { #azsgiyvwga .gt_indent_4 {
text-indent: 20px; text-indent: 20px;
} }
#lpuybuuknr .gt_indent_5 { #azsgiyvwga .gt_indent_5 {
text-indent: 25px; text-indent: 25px;
} }
</style> </style>
@ -1811,28 +1856,28 @@ Note: as opposed to the build in datediff() this handles counting years as integ
<code class="sourceCode R"><span><span class="va">list</span> <span class="op">&lt;-</span></span> <code class="sourceCode R"><span><span class="va">list</span> <span class="op">&lt;-</span></span>
<span> <span class="fu"><a href="../reference/REDCap_split.html">REDCap_split</a></span><span class="op">(</span>records <span class="op">=</span> <span class="va">redcapcast_data</span>,</span> <span> <span class="fu"><a href="../reference/REDCap_split.html">REDCap_split</a></span><span class="op">(</span>records <span class="op">=</span> <span class="va">redcapcast_data</span>,</span>
<span> metadata <span class="op">=</span> <span class="va">redcapcast_meta</span>,</span> <span> metadata <span class="op">=</span> <span class="va">redcapcast_meta</span>,</span>
<span> forms <span class="op">=</span> <span class="st">"repeating"</span><span class="op">)</span></span> <span> forms <span class="op">=</span> <span class="st">"repeating"</span><span class="op">)</span><span class="op">|&gt;</span> <span class="fu"><a href="../reference/sanitize_split.html">sanitize_split</a></span><span class="op">(</span><span class="op">)</span></span>
<span><span class="fu"><a href="https://rdrr.io/r/utils/str.html" class="external-link">str</a></span><span class="op">(</span><span class="va">list</span><span class="op">)</span></span> <span><span class="fu"><a href="https://rdrr.io/r/utils/str.html" class="external-link">str</a></span><span class="op">(</span><span class="va">list</span><span class="op">)</span></span>
<span><span class="co">#&gt; List of 2</span></span> <span><span class="co">#&gt; List of 2</span></span>
<span><span class="co">#&gt; $ :'data.frame': 9 obs. of 17 variables:</span></span> <span><span class="co">#&gt; $ : tibble [10 × 17] (S3: tbl_df/tbl/data.frame)</span></span>
<span><span class="co">#&gt; ..$ record_id : num [1:9] 1 2 2 3 3 3 4 4 5</span></span> <span><span class="co">#&gt; ..$ record_id : num [1:10] 1 2 2 3 3 3 4 4 5 6</span></span>
<span><span class="co">#&gt; ..$ redcap_event_name : chr [1:9] "inclusion" "inclusion" "follow1" "inclusion" ...</span></span> <span><span class="co">#&gt; ..$ redcap_event_name : chr [1:10] "inclusion" "inclusion" "follow1" "inclusion" ...</span></span>
<span><span class="co">#&gt; ..$ cpr : chr [1:9] "1203401OB4" "0102342303" NA "2301569823" ...</span></span> <span><span class="co">#&gt; ..$ cpr : chr [1:10] "1203401OB4" "0102342303" NA "2301569823" ...</span></span>
<span><span class="co">#&gt; ..$ inclusion : Date[1:9], format: "2023-03-13" "2023-03-01" ...</span></span> <span><span class="co">#&gt; ..$ inclusion : Date[1:10], format: "2023-03-13" "2023-03-01" ...</span></span>
<span><span class="co">#&gt; ..$ dob : Date[1:9], format: "1940-03-12" "1934-02-01" ...</span></span> <span><span class="co">#&gt; ..$ dob : Date[1:10], format: "1940-03-12" "1934-02-01" ...</span></span>
<span><span class="co">#&gt; ..$ age : num [1:9] 83 89.1 NA 66.1 NA ...</span></span> <span><span class="co">#&gt; ..$ age : num [1:10] 83 89.1 NA 66.1 NA ...</span></span>
<span><span class="co">#&gt; ..$ age_integer : num [1:9] 83 89 NA 66 NA NA 117 NA 126</span></span> <span><span class="co">#&gt; ..$ age_integer : num [1:10] 83 89 NA 66 NA NA 117 NA 126 91</span></span>
<span><span class="co">#&gt; ..$ sex : chr [1:9] "female" "male" NA "male" ...</span></span> <span><span class="co">#&gt; ..$ sex : chr [1:10] "female" "male" NA "male" ...</span></span>
<span><span class="co">#&gt; ..$ cohabitation : chr [1:9] "Yes" "Yes" NA "No" ...</span></span> <span><span class="co">#&gt; ..$ cohabitation : chr [1:10] "Yes" "Yes" NA "No" ...</span></span>
<span><span class="co">#&gt; ..$ hypertension : chr [1:9] "No" "No" NA "Yes" ...</span></span> <span><span class="co">#&gt; ..$ hypertension : chr [1:10] "No" "No" NA "Yes" ...</span></span>
<span><span class="co">#&gt; ..$ diabetes : chr [1:9] "Yes" "No" NA "Yes" ...</span></span> <span><span class="co">#&gt; ..$ diabetes : chr [1:10] "Yes" "No" NA "Yes" ...</span></span>
<span><span class="co">#&gt; ..$ region : chr [1:9] "East" "South" NA "North" ...</span></span> <span><span class="co">#&gt; ..$ region : chr [1:10] "East" "South" NA "North" ...</span></span>
<span><span class="co">#&gt; ..$ baseline_data_start_complete: chr [1:9] "Incomplete" "Incomplete" NA "Incomplete" ...</span></span> <span><span class="co">#&gt; ..$ baseline_data_start_complete: chr [1:10] "Incomplete" "Incomplete" NA "Incomplete" ...</span></span>
<span><span class="co">#&gt; ..$ mrs_assessed : chr [1:9] "Yes" "Yes" "Yes" NA ...</span></span> <span><span class="co">#&gt; ..$ mrs_assessed : chr [1:10] "Yes" "Yes" "Yes" NA ...</span></span>
<span><span class="co">#&gt; ..$ mrs_date : Date[1:9], format: "2023-03-13" "2023-03-07" ...</span></span> <span><span class="co">#&gt; ..$ mrs_date : Date[1:10], format: "2023-03-13" "2023-03-07" ...</span></span>
<span><span class="co">#&gt; ..$ mrs_score : num [1:9] 1 1 3 NA 2 1 NA NA NA</span></span> <span><span class="co">#&gt; ..$ mrs_score : num [1:10] 1 1 3 NA 2 1 NA NA NA NA</span></span>
<span><span class="co">#&gt; ..$ mrs_complete : chr [1:9] "Incomplete" "Incomplete" "Incomplete" "Incomplete" ...</span></span> <span><span class="co">#&gt; ..$ mrs_complete : chr [1:10] "Incomplete" "Incomplete" "Incomplete" "Incomplete" ...</span></span>
<span><span class="co">#&gt; $ new_event:'data.frame': 9 obs. of 6 variables:</span></span> <span><span class="co">#&gt; $ new_event: tibble [9 × 6] (S3: tbl_df/tbl/data.frame)</span></span>
<span><span class="co">#&gt; ..$ record_id : num [1:9] 2 3 3 3 3 3 4 4 4</span></span> <span><span class="co">#&gt; ..$ record_id : num [1:9] 2 3 3 3 3 3 4 4 4</span></span>
<span><span class="co">#&gt; ..$ redcap_event_name : chr [1:9] "follow1" "follow1" "follow1" "follow2" ...</span></span> <span><span class="co">#&gt; ..$ redcap_event_name : chr [1:9] "follow1" "follow1" "follow1" "follow2" ...</span></span>
<span><span class="co">#&gt; ..$ redcap_repeat_instrument: chr [1:9] "new_event" "new_event" "new_event" "new_event" ...</span></span> <span><span class="co">#&gt; ..$ redcap_repeat_instrument: chr [1:9] "new_event" "new_event" "new_event" "new_event" ...</span></span>
@ -1843,31 +1888,31 @@ Note: as opposed to the build in datediff() this handles counting years as integ
<code class="sourceCode R"><span><span class="va">list</span> <span class="op">&lt;-</span></span> <code class="sourceCode R"><span><span class="va">list</span> <span class="op">&lt;-</span></span>
<span> <span class="fu"><a href="../reference/REDCap_split.html">REDCap_split</a></span><span class="op">(</span>records <span class="op">=</span> <span class="va">redcapcast_data</span>,</span> <span> <span class="fu"><a href="../reference/REDCap_split.html">REDCap_split</a></span><span class="op">(</span>records <span class="op">=</span> <span class="va">redcapcast_data</span>,</span>
<span> metadata <span class="op">=</span> <span class="va">redcapcast_meta</span>,</span> <span> metadata <span class="op">=</span> <span class="va">redcapcast_meta</span>,</span>
<span> forms <span class="op">=</span> <span class="st">"all"</span><span class="op">)</span></span> <span> forms <span class="op">=</span> <span class="st">"all"</span><span class="op">)</span> <span class="op">|&gt;</span> <span class="fu"><a href="../reference/sanitize_split.html">sanitize_split</a></span><span class="op">(</span><span class="op">)</span></span>
<span><span class="fu"><a href="https://rdrr.io/r/utils/str.html" class="external-link">str</a></span><span class="op">(</span><span class="va">list</span><span class="op">)</span></span> <span><span class="fu"><a href="https://rdrr.io/r/utils/str.html" class="external-link">str</a></span><span class="op">(</span><span class="va">list</span><span class="op">)</span></span>
<span><span class="co">#&gt; List of 3</span></span> <span><span class="co">#&gt; List of 3</span></span>
<span><span class="co">#&gt; $ baseline_data_start:'data.frame': 9 obs. of 13 variables:</span></span> <span><span class="co">#&gt; $ baseline_data_start: tibble [6 × 13] (S3: tbl_df/tbl/data.frame)</span></span>
<span><span class="co">#&gt; ..$ record_id : num [1:9] 1 2 2 3 3 3 4 4 5</span></span> <span><span class="co">#&gt; ..$ record_id : num [1:6] 1 2 3 4 5 6</span></span>
<span><span class="co">#&gt; ..$ redcap_event_name : chr [1:9] "inclusion" "inclusion" "follow1" "inclusion" ...</span></span> <span><span class="co">#&gt; ..$ redcap_event_name : chr [1:6] "inclusion" "inclusion" "inclusion" "inclusion" ...</span></span>
<span><span class="co">#&gt; ..$ cpr : chr [1:9] "1203401OB4" "0102342303" NA "2301569823" ...</span></span> <span><span class="co">#&gt; ..$ cpr : chr [1:6] "1203401OB4" "0102342303" "2301569823" "0204051342" ...</span></span>
<span><span class="co">#&gt; ..$ inclusion : Date[1:9], format: "2023-03-13" "2023-03-01" ...</span></span> <span><span class="co">#&gt; ..$ inclusion : Date[1:6], format: "2023-03-13" "2023-03-01" ...</span></span>
<span><span class="co">#&gt; ..$ dob : Date[1:9], format: "1940-03-12" "1934-02-01" ...</span></span> <span><span class="co">#&gt; ..$ dob : Date[1:6], format: "1940-03-12" "1934-02-01" ...</span></span>
<span><span class="co">#&gt; ..$ age : num [1:9] 83 89.1 NA 66.1 NA ...</span></span> <span><span class="co">#&gt; ..$ age : num [1:6] 83 89.1 66.1 117.9 126.2 ...</span></span>
<span><span class="co">#&gt; ..$ age_integer : num [1:9] 83 89 NA 66 NA NA 117 NA 126</span></span> <span><span class="co">#&gt; ..$ age_integer : num [1:6] 83 89 66 117 126 91</span></span>
<span><span class="co">#&gt; ..$ sex : chr [1:9] "female" "male" NA "male" ...</span></span> <span><span class="co">#&gt; ..$ sex : chr [1:6] "female" "male" "male" "female" ...</span></span>
<span><span class="co">#&gt; ..$ cohabitation : chr [1:9] "Yes" "Yes" NA "No" ...</span></span> <span><span class="co">#&gt; ..$ cohabitation : chr [1:6] "Yes" "Yes" "No" NA ...</span></span>
<span><span class="co">#&gt; ..$ hypertension : chr [1:9] "No" "No" NA "Yes" ...</span></span> <span><span class="co">#&gt; ..$ hypertension : chr [1:6] "No" "No" "Yes" NA ...</span></span>
<span><span class="co">#&gt; ..$ diabetes : chr [1:9] "Yes" "No" NA "Yes" ...</span></span> <span><span class="co">#&gt; ..$ diabetes : chr [1:6] "Yes" "No" "Yes" NA ...</span></span>
<span><span class="co">#&gt; ..$ region : chr [1:9] "East" "South" NA "North" ...</span></span> <span><span class="co">#&gt; ..$ region : chr [1:6] "East" "South" "North" NA ...</span></span>
<span><span class="co">#&gt; ..$ baseline_data_start_complete: chr [1:9] "Incomplete" "Incomplete" NA "Incomplete" ...</span></span> <span><span class="co">#&gt; ..$ baseline_data_start_complete: chr [1:6] "Incomplete" "Incomplete" "Incomplete" "Incomplete" ...</span></span>
<span><span class="co">#&gt; $ mrs :'data.frame': 9 obs. of 6 variables:</span></span> <span><span class="co">#&gt; $ mrs : tibble [5 × 6] (S3: tbl_df/tbl/data.frame)</span></span>
<span><span class="co">#&gt; ..$ record_id : num [1:9] 1 2 2 3 3 3 4 4 5</span></span> <span><span class="co">#&gt; ..$ record_id : num [1:5] 1 2 2 3 3</span></span>
<span><span class="co">#&gt; ..$ redcap_event_name: chr [1:9] "inclusion" "inclusion" "follow1" "inclusion" ...</span></span> <span><span class="co">#&gt; ..$ redcap_event_name: chr [1:5] "inclusion" "inclusion" "follow1" "follow1" ...</span></span>
<span><span class="co">#&gt; ..$ mrs_assessed : chr [1:9] "Yes" "Yes" "Yes" NA ...</span></span> <span><span class="co">#&gt; ..$ mrs_assessed : chr [1:5] "Yes" "Yes" "Yes" "Yes" ...</span></span>
<span><span class="co">#&gt; ..$ mrs_date : Date[1:9], format: "2023-03-13" "2023-03-07" ...</span></span> <span><span class="co">#&gt; ..$ mrs_date : Date[1:5], format: "2023-03-13" "2023-03-07" ...</span></span>
<span><span class="co">#&gt; ..$ mrs_score : num [1:9] 1 1 3 NA 2 1 NA NA NA</span></span> <span><span class="co">#&gt; ..$ mrs_score : num [1:5] 1 1 3 2 1</span></span>
<span><span class="co">#&gt; ..$ mrs_complete : chr [1:9] "Incomplete" "Incomplete" "Incomplete" "Incomplete" ...</span></span> <span><span class="co">#&gt; ..$ mrs_complete : chr [1:5] "Incomplete" "Incomplete" "Incomplete" "Incomplete" ...</span></span>
<span><span class="co">#&gt; $ new_event :'data.frame': 9 obs. of 6 variables:</span></span> <span><span class="co">#&gt; $ new_event : tibble [9 × 6] (S3: tbl_df/tbl/data.frame)</span></span>
<span><span class="co">#&gt; ..$ record_id : num [1:9] 2 3 3 3 3 3 4 4 4</span></span> <span><span class="co">#&gt; ..$ record_id : num [1:9] 2 3 3 3 3 3 4 4 4</span></span>
<span><span class="co">#&gt; ..$ redcap_event_name : chr [1:9] "follow1" "follow1" "follow1" "follow2" ...</span></span> <span><span class="co">#&gt; ..$ redcap_event_name : chr [1:9] "follow1" "follow1" "follow1" "follow2" ...</span></span>
<span><span class="co">#&gt; ..$ redcap_repeat_instrument: chr [1:9] "new_event" "new_event" "new_event" "new_event" ...</span></span> <span><span class="co">#&gt; ..$ redcap_repeat_instrument: chr [1:9] "new_event" "new_event" "new_event" "new_event" ...</span></span>
@ -1894,7 +1939,46 @@ approach.</p>
<h2 id="pivotting-to-wider-format">Pivotting to wider format<a class="anchor" aria-label="anchor" href="#pivotting-to-wider-format"></a> <h2 id="pivotting-to-wider-format">Pivotting to wider format<a class="anchor" aria-label="anchor" href="#pivotting-to-wider-format"></a>
</h2> </h2>
<div class="sourceCode" id="cb7"><pre class="downlit sourceCode r"> <div class="sourceCode" id="cb7"><pre class="downlit sourceCode r">
<code class="sourceCode R"><span><span class="co"># redcap_wider(ds)</span></span></code></pre></div> <code class="sourceCode R"><span><span class="fu"><a href="../reference/redcap_wider.html">redcap_wider</a></span><span class="op">(</span><span class="va">list</span><span class="op">)</span> <span class="op">|&gt;</span> <span class="fu"><a href="https://rdrr.io/r/utils/str.html" class="external-link">str</a></span><span class="op">(</span><span class="op">)</span></span>
<span><span class="co">#&gt; Joining with `by = join_by(record_id)`</span></span>
<span><span class="co">#&gt; Joining with `by = join_by(record_id)`</span></span>
<span><span class="co">#&gt; 'data.frame': 6 obs. of 36 variables:</span></span>
<span><span class="co">#&gt; $ record_id : num 1 2 3 4 5 6</span></span>
<span><span class="co">#&gt; $ cpr : chr "1203401OB4" "0102342303" "2301569823" "0204051342" ...</span></span>
<span><span class="co">#&gt; $ inclusion : Date, format: "2023-03-13" "2023-03-01" ...</span></span>
<span><span class="co">#&gt; $ dob : Date, format: "1940-03-12" "1934-02-01" ...</span></span>
<span><span class="co">#&gt; $ age : num 83 89.1 66.1 117.9 126.2 ...</span></span>
<span><span class="co">#&gt; $ age_integer : num 83 89 66 117 126 91</span></span>
<span><span class="co">#&gt; $ sex : chr "female" "male" "male" "female" ...</span></span>
<span><span class="co">#&gt; $ cohabitation : chr "Yes" "Yes" "No" NA ...</span></span>
<span><span class="co">#&gt; $ hypertension : chr "No" "No" "Yes" NA ...</span></span>
<span><span class="co">#&gt; $ diabetes : chr "Yes" "No" "Yes" NA ...</span></span>
<span><span class="co">#&gt; $ region : chr "East" "South" "North" NA ...</span></span>
<span><span class="co">#&gt; $ baseline_data_start_complete: chr "Incomplete" "Incomplete" "Incomplete" "Incomplete" ...</span></span>
<span><span class="co">#&gt; $ mrs_assessed_inclusion : chr "Yes" "Yes" NA NA ...</span></span>
<span><span class="co">#&gt; $ mrs_assessed_follow1 : chr NA "Yes" "Yes" NA ...</span></span>
<span><span class="co">#&gt; $ mrs_assessed_follow2 : chr NA NA "Yes" NA ...</span></span>
<span><span class="co">#&gt; $ mrs_date_inclusion : Date, format: "2023-03-13" "2023-03-07" ...</span></span>
<span><span class="co">#&gt; $ mrs_date_follow1 : Date, format: NA "2023-03-09" ...</span></span>
<span><span class="co">#&gt; $ mrs_date_follow2 : Date, format: NA NA ...</span></span>
<span><span class="co">#&gt; $ mrs_score_inclusion : num 1 1 NA NA NA NA</span></span>
<span><span class="co">#&gt; $ mrs_score_follow1 : num NA 3 2 NA NA NA</span></span>
<span><span class="co">#&gt; $ mrs_score_follow2 : num NA NA 1 NA NA NA</span></span>
<span><span class="co">#&gt; $ mrs_complete_inclusion : chr "Incomplete" "Incomplete" NA NA ...</span></span>
<span><span class="co">#&gt; $ mrs_complete_follow1 : chr NA "Incomplete" "Incomplete" NA ...</span></span>
<span><span class="co">#&gt; $ mrs_complete_follow2 : chr NA NA "Incomplete" NA ...</span></span>
<span><span class="co">#&gt; $ event_type_1_follow1 : chr NA "TIA" "AIS" NA ...</span></span>
<span><span class="co">#&gt; $ event_type_1_follow2 : chr NA NA "ICH" "AIS" ...</span></span>
<span><span class="co">#&gt; $ new_event_complete_1_follow1: chr NA "Incomplete" "Incomplete" NA ...</span></span>
<span><span class="co">#&gt; $ new_event_complete_1_follow2: chr NA NA "Incomplete" "Complete" ...</span></span>
<span><span class="co">#&gt; $ event_type_2_follow1 : chr NA NA "ICH" NA ...</span></span>
<span><span class="co">#&gt; $ event_type_2_follow2 : chr NA NA "TIA" "ICH" ...</span></span>
<span><span class="co">#&gt; $ event_type_3_follow1 : chr NA NA NA NA ...</span></span>
<span><span class="co">#&gt; $ event_type_3_follow2 : chr NA NA "AIS" "Unknown" ...</span></span>
<span><span class="co">#&gt; $ new_event_complete_2_follow1: chr NA NA "Incomplete" NA ...</span></span>
<span><span class="co">#&gt; $ new_event_complete_2_follow2: chr NA NA "Incomplete" "Incomplete" ...</span></span>
<span><span class="co">#&gt; $ new_event_complete_3_follow1: chr NA NA NA NA ...</span></span>
<span><span class="co">#&gt; $ new_event_complete_3_follow2: chr NA NA "Incomplete" "Complete" ...</span></span></code></pre></div>
</div> </div>
</main><aside class="col-md-3"><nav id="toc"><h2>On this page</h2> </main><aside class="col-md-3"><nav id="toc"><h2>On this page</h2>
</nav></aside> </nav></aside>

2
pkgdown.yml
View File

@ -3,7 +3,7 @@ pkgdown: 2.0.7
pkgdown_sha: ~ pkgdown_sha: ~
articles: articles:
Introduction: Introduction.html Introduction: Introduction.html
last_built: 2024-02-05T20:45Z last_built: 2024-02-06T13:27Z
urls: urls:
reference: https://agdamsbo.github.io/REDCapCAST/reference reference: https://agdamsbo.github.io/REDCapCAST/reference
article: https://agdamsbo.github.io/REDCapCAST/articles article: https://agdamsbo.github.io/REDCapCAST/articles

18
reference/ds2dd.html
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@ -147,8 +147,9 @@ REDCapCAST::metadata_names.</p></dd>
<span class="r-out co"><span class="r-pr">#&gt;</span> 19 mrs_score basis NA text</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 19 mrs_score basis NA text</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 20 mrs_complete basis NA text</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 20 mrs_complete basis NA text</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 21 event_datetime basis NA text</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 21 event_datetime basis NA text</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 22 event_type basis NA text</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 22 event_age basis NA text</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 23 new_event_complete basis NA text</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 23 event_type basis NA text</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 24 new_event_complete basis NA text</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> field_label select_choices_or_calculations field_note</span> <span class="r-out co"><span class="r-pr">#&gt;</span> field_label select_choices_or_calculations field_note</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 1 record_id NA NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 1 record_id NA NA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 2 redcap_event_name NA NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 2 redcap_event_name NA NA</span>
@ -171,8 +172,9 @@ REDCapCAST::metadata_names.</p></dd>
<span class="r-out co"><span class="r-pr">#&gt;</span> 19 mrs_score NA NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 19 mrs_score NA NA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 20 mrs_complete NA NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 20 mrs_complete NA NA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 21 event_datetime NA NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 21 event_datetime NA NA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 22 event_type NA NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 22 event_age NA NA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 23 new_event_complete NA NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 23 event_type NA NA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 24 new_event_complete NA NA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> text_validation_type_or_show_slider_number text_validation_min</span> <span class="r-out co"><span class="r-pr">#&gt;</span> text_validation_type_or_show_slider_number text_validation_min</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 1 NA NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 1 NA NA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 2 NA NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 2 NA NA</span>
@ -197,6 +199,7 @@ REDCapCAST::metadata_names.</p></dd>
<span class="r-out co"><span class="r-pr">#&gt;</span> 21 NA NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 21 NA NA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 22 NA NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 22 NA NA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 23 NA NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 23 NA NA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 24 NA NA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> text_validation_max identifier branching_logic required_field</span> <span class="r-out co"><span class="r-pr">#&gt;</span> text_validation_max identifier branching_logic required_field</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 1 NA NA NA NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 1 NA NA NA NA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 2 NA NA NA NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 2 NA NA NA NA</span>
@ -221,6 +224,7 @@ REDCapCAST::metadata_names.</p></dd>
<span class="r-out co"><span class="r-pr">#&gt;</span> 21 NA NA NA NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 21 NA NA NA NA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 22 NA NA NA NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 22 NA NA NA NA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 23 NA NA NA NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 23 NA NA NA NA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 24 NA NA NA NA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> custom_alignment question_number matrix_group_name matrix_ranking</span> <span class="r-out co"><span class="r-pr">#&gt;</span> custom_alignment question_number matrix_group_name matrix_ranking</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 1 NA NA NA NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 1 NA NA NA NA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 2 NA NA NA NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 2 NA NA NA NA</span>
@ -245,6 +249,7 @@ REDCapCAST::metadata_names.</p></dd>
<span class="r-out co"><span class="r-pr">#&gt;</span> 21 NA NA NA NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 21 NA NA NA NA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 22 NA NA NA NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 22 NA NA NA NA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 23 NA NA NA NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 23 NA NA NA NA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 24 NA NA NA NA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> field_annotation</span> <span class="r-out co"><span class="r-pr">#&gt;</span> field_annotation</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 1 NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 1 NA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 2 NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 2 NA</span>
@ -269,6 +274,7 @@ REDCapCAST::metadata_names.</p></dd>
<span class="r-out co"><span class="r-pr">#&gt;</span> 21 NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 21 NA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 22 NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 22 NA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 23 NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 23 NA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 24 NA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span> <span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> $`Column names`</span> <span class="r-out co"><span class="r-pr">#&gt;</span> $`Column names`</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> [1] "record_id" "redcap_event_name" </span> <span class="r-out co"><span class="r-pr">#&gt;</span> [1] "record_id" "redcap_event_name" </span>
@ -281,8 +287,8 @@ REDCapCAST::metadata_names.</p></dd>
<span class="r-out co"><span class="r-pr">#&gt;</span> [15] "region" "baseline_data_start_complete"</span> <span class="r-out co"><span class="r-pr">#&gt;</span> [15] "region" "baseline_data_start_complete"</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> [17] "mrs_assessed" "mrs_date" </span> <span class="r-out co"><span class="r-pr">#&gt;</span> [17] "mrs_assessed" "mrs_date" </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> [19] "mrs_score" "mrs_complete" </span> <span class="r-out co"><span class="r-pr">#&gt;</span> [19] "mrs_score" "mrs_complete" </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> [21] "event_datetime" "event_type" </span> <span class="r-out co"><span class="r-pr">#&gt;</span> [21] "event_datetime" "event_age" </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> [23] "new_event_complete" </span> <span class="r-out co"><span class="r-pr">#&gt;</span> [23] "event_type" "new_event_complete" </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span> <span class="r-out co"><span class="r-pr">#&gt;</span> </span>
</code></pre></div> </code></pre></div>
</div> </div>

128
reference/ds2dd_detailed.html
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@ -157,71 +157,80 @@ Please, do always inspect the data dictionary before upload.</p>
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="va">data</span> <span class="op">&lt;-</span> <span class="va">redcapcast_data</span></span></span> <div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="va">data</span> <span class="op">&lt;-</span> <span class="va">redcapcast_data</span></span></span>
<span class="r-in"><span><span class="va">data</span> <span class="op">|&gt;</span> <span class="fu">ds2dd_detailed</span><span class="op">(</span>validate.time <span class="op">=</span> <span class="cn">TRUE</span><span class="op">)</span></span></span> <span class="r-in"><span><span class="va">data</span> <span class="op">|&gt;</span> <span class="fu">ds2dd_detailed</span><span class="op">(</span>validate.time <span class="op">=</span> <span class="cn">TRUE</span><span class="op">)</span></span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> $is.POSIX</span> <span class="r-out co"><span class="r-pr">#&gt;</span> $is.POSIX</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># A tibble: 19 × 2</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> inclusion_time event_datetime </span> <span class="r-out co"><span class="r-pr">#&gt;</span> inclusion_time event_datetime </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 1 12:38:49 &lt;NA&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494; font-style: italic;">&lt;time&gt;</span> <span style="color: #949494; font-style: italic;">&lt;dttm&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 2 10:38:57 &lt;NA&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 1</span> 12<span style="color: #949494;">:</span>38<span style="color: #949494;">:</span>49 <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 3 NA &lt;NA&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 2</span> 10<span style="color: #949494;">:</span>38<span style="color: #949494;">:</span>57 <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 4 NA 2024-01-18 12:49:42</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 3</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 5 12:01:07 &lt;NA&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 4</span> <span style="color: #BB0000;">NA</span> 2024-01-18 <span style="color: #949494;">12:49:42</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 6 NA &lt;NA&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 5</span> 12<span style="color: #949494;">:</span>01<span style="color: #949494;">:</span>07 <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 7 NA &lt;NA&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 6</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 8 NA 2024-01-18 12:49:58</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 7</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 9 NA 2024-01-18 12:50:01</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 8</span> <span style="color: #BB0000;">NA</span> 2024-01-18 <span style="color: #949494;">12:49:58</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 10 NA 2024-01-18 12:50:05</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 9</span> <span style="color: #BB0000;">NA</span> 2024-01-18 <span style="color: #949494;">12:50:01</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 11 NA 2024-01-18 12:50:07</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">10</span> <span style="color: #BB0000;">NA</span> 2024-01-18 <span style="color: #949494;">12:50:05</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 12 NA 2024-01-18 12:50:09</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">11</span> <span style="color: #BB0000;">NA</span> 2024-01-18 <span style="color: #949494;">12:50:07</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 13 20:39:19 &lt;NA&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">12</span> <span style="color: #BB0000;">NA</span> 2024-01-18 <span style="color: #949494;">12:50:09</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 14 NA &lt;NA&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">13</span> 20<span style="color: #949494;">:</span>39<span style="color: #949494;">:</span>19 <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 15 NA 2024-01-18 12:50:19</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">14</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 16 NA 2024-01-18 12:50:22</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">15</span> <span style="color: #BB0000;">NA</span> 2024-01-18 <span style="color: #949494;">12:50:19</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 17 NA 2024-01-18 12:50:24</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">16</span> <span style="color: #BB0000;">NA</span> 2024-01-18 <span style="color: #949494;">12:50:22</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 18 08:50:31 &lt;NA&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">17</span> <span style="color: #BB0000;">NA</span> 2024-01-18 <span style="color: #949494;">12:50:24</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">18</span> 08<span style="color: #949494;">:</span>50<span style="color: #949494;">:</span>31 <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">19</span> 08<span style="color: #949494;">:</span>49<span style="color: #949494;">:</span>28 <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span> <span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> $is.datetime</span> <span class="r-out co"><span class="r-pr">#&gt;</span> $is.datetime</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># A tibble: 19 × 1</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> event_datetime </span> <span class="r-out co"><span class="r-pr">#&gt;</span> event_datetime </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 1 &lt;NA&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494; font-style: italic;">&lt;dttm&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 2 &lt;NA&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 1</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 3 &lt;NA&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 2</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 4 2024-01-18 12:49:42</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 3</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 5 &lt;NA&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 4</span> 2024-01-18 <span style="color: #949494;">12:49:42</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 6 &lt;NA&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 5</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 7 &lt;NA&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 6</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 8 2024-01-18 12:49:58</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 7</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 9 2024-01-18 12:50:01</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 8</span> 2024-01-18 <span style="color: #949494;">12:49:58</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 10 2024-01-18 12:50:05</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 9</span> 2024-01-18 <span style="color: #949494;">12:50:01</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 11 2024-01-18 12:50:07</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">10</span> 2024-01-18 <span style="color: #949494;">12:50:05</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 12 2024-01-18 12:50:09</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">11</span> 2024-01-18 <span style="color: #949494;">12:50:07</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 13 &lt;NA&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">12</span> 2024-01-18 <span style="color: #949494;">12:50:09</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 14 &lt;NA&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">13</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 15 2024-01-18 12:50:19</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">14</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 16 2024-01-18 12:50:22</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">15</span> 2024-01-18 <span style="color: #949494;">12:50:19</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 17 2024-01-18 12:50:24</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">16</span> 2024-01-18 <span style="color: #949494;">12:50:22</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 18 &lt;NA&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">17</span> 2024-01-18 <span style="color: #949494;">12:50:24</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">18</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">19</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span> <span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> $is.time_only</span> <span class="r-out co"><span class="r-pr">#&gt;</span> $is.time_only</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># A tibble: 19 × 1</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> inclusion_time</span> <span class="r-out co"><span class="r-pr">#&gt;</span> inclusion_time</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 1 12:38:49</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494; font-style: italic;">&lt;time&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 2 10:38:57</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 1</span> 12<span style="color: #949494;">:</span>38<span style="color: #949494;">:</span>49 </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 3 NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 2</span> 10<span style="color: #949494;">:</span>38<span style="color: #949494;">:</span>57 </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 4 NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 3</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 5 12:01:07</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 4</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 6 NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 5</span> 12<span style="color: #949494;">:</span>01<span style="color: #949494;">:</span>07 </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 7 NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 6</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 8 NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 7</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 9 NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 8</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 10 NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 9</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 11 NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">10</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 12 NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">11</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 13 20:39:19</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">12</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 14 NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">13</span> 20<span style="color: #949494;">:</span>39<span style="color: #949494;">:</span>19 </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 15 NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">14</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 16 NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">15</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 17 NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">16</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 18 08:50:31</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">17</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">18</span> 08<span style="color: #949494;">:</span>50<span style="color: #949494;">:</span>31 </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">19</span> 08<span style="color: #949494;">:</span>49<span style="color: #949494;">:</span>28 </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span> <span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-in"><span><span class="va">data</span> <span class="op">|&gt;</span> <span class="fu">ds2dd_detailed</span><span class="op">(</span><span class="op">)</span></span></span> <span class="r-in"><span><span class="va">data</span> <span class="op">|&gt;</span> <span class="fu">ds2dd_detailed</span><span class="op">(</span><span class="op">)</span></span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> $data</span> <span class="r-out co"><span class="r-pr">#&gt;</span> $data</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># A tibble: 18 × 23</span></span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># A tibble: 19 × 24</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> record_id redcap_event_name redcap_repeat_instrument redcap_repeat_instance</span> <span class="r-out co"><span class="r-pr">#&gt;</span> record_id redcap_event_name redcap_repeat_instrument redcap_repeat_instance</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494; font-style: italic;">&lt;dbl&gt;</span> <span style="color: #949494; font-style: italic;">&lt;chr&gt;</span> <span style="color: #949494; font-style: italic;">&lt;chr&gt;</span> <span style="color: #949494; font-style: italic;">&lt;dbl&gt;</span></span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494; font-style: italic;">&lt;dbl&gt;</span> <span style="color: #949494; font-style: italic;">&lt;chr&gt;</span> <span style="color: #949494; font-style: italic;">&lt;chr&gt;</span> <span style="color: #949494; font-style: italic;">&lt;dbl&gt;</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 1</span> 1 inclusion <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span></span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 1</span> 1 inclusion <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span></span>
@ -242,15 +251,16 @@ Please, do always inspect the data dictionary before upload.</p>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">16</span> 4 follow2 New Event (?) 2</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">16</span> 4 follow2 New Event (?) 2</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">17</span> 4 follow2 New Event (?) 3</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">17</span> 4 follow2 New Event (?) 3</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">18</span> 5 inclusion <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span></span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">18</span> 5 inclusion <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># ℹ 19 more variables: cpr &lt;chr&gt;, inclusion &lt;date&gt;, inclusion_time &lt;chr&gt;,</span></span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">19</span> 6 inclusion <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># ℹ 20 more variables: cpr &lt;chr&gt;, inclusion &lt;date&gt;, inclusion_time &lt;chr&gt;,</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># dob &lt;date&gt;, age &lt;dbl&gt;, age_integer &lt;dbl&gt;, sex &lt;chr&gt;, cohabitation &lt;chr&gt;,</span></span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># dob &lt;date&gt;, age &lt;dbl&gt;, age_integer &lt;dbl&gt;, sex &lt;chr&gt;, cohabitation &lt;chr&gt;,</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># hypertension &lt;chr&gt;, diabetes &lt;chr&gt;, region &lt;chr&gt;,</span></span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># hypertension &lt;chr&gt;, diabetes &lt;chr&gt;, region &lt;chr&gt;,</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># baseline_data_start_complete &lt;chr&gt;, mrs_assessed &lt;chr&gt;, mrs_date &lt;date&gt;,</span></span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># baseline_data_start_complete &lt;chr&gt;, mrs_assessed &lt;chr&gt;, mrs_date &lt;date&gt;,</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># mrs_score &lt;dbl&gt;, mrs_complete &lt;chr&gt;, event_datetime &lt;dttm&gt;,</span></span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># mrs_score &lt;dbl&gt;, mrs_complete &lt;chr&gt;, event_datetime &lt;dttm&gt;,</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># event_type &lt;chr&gt;, new_event_complete &lt;chr&gt;</span></span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># event_age &lt;lgl&gt;, event_type &lt;chr&gt;, new_event_complete &lt;chr&gt;</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span> <span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> $meta</span> <span class="r-out co"><span class="r-pr">#&gt;</span> $meta</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># A tibble: 23 × 18</span></span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># A tibble: 24 × 18</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> field_name form_name section_header field_type field_label </span> <span class="r-out co"><span class="r-pr">#&gt;</span> field_name form_name section_header field_type field_label </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494; font-style: italic;">&lt;chr&gt;</span> <span style="color: #949494; font-style: italic;">&lt;chr&gt;</span> <span style="color: #949494; font-style: italic;">&lt;lgl&gt;</span> <span style="color: #949494; font-style: italic;">&lt;chr&gt;</span> <span style="color: #949494; font-style: italic;">&lt;chr&gt;</span> </span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494; font-style: italic;">&lt;chr&gt;</span> <span style="color: #949494; font-style: italic;">&lt;chr&gt;</span> <span style="color: #949494; font-style: italic;">&lt;lgl&gt;</span> <span style="color: #949494; font-style: italic;">&lt;chr&gt;</span> <span style="color: #949494; font-style: italic;">&lt;chr&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 1</span> record_id data <span style="color: #BB0000;">NA</span> text record_id </span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 1</span> record_id data <span style="color: #BB0000;">NA</span> text record_id </span>
@ -263,7 +273,7 @@ Please, do always inspect the data dictionary before upload.</p>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 8</span> dob data <span style="color: #BB0000;">NA</span> text dob </span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 8</span> dob data <span style="color: #BB0000;">NA</span> text dob </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 9</span> age data <span style="color: #BB0000;">NA</span> text age </span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 9</span> age data <span style="color: #BB0000;">NA</span> text age </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">10</span> age_integer data <span style="color: #BB0000;">NA</span> text age_integer </span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">10</span> age_integer data <span style="color: #BB0000;">NA</span> text age_integer </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># ℹ 13 more rows</span></span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># ℹ 14 more rows</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># ℹ 13 more variables: select_choices_or_calculations &lt;lgl&gt;, field_note &lt;lgl&gt;,</span></span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># ℹ 13 more variables: select_choices_or_calculations &lt;lgl&gt;, field_note &lt;lgl&gt;,</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># text_validation_type_or_show_slider_number &lt;chr&gt;,</span></span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># text_validation_type_or_show_slider_number &lt;chr&gt;,</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># text_validation_min &lt;lgl&gt;, text_validation_max &lt;lgl&gt;, identifier &lt;lgl&gt;,</span></span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># text_validation_min &lt;lgl&gt;, text_validation_max &lt;lgl&gt;, identifier &lt;lgl&gt;,</span></span>

8
reference/ds2ical.html
View File

@ -111,14 +111,14 @@ event description. Can take any column from data set.</p></dd>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># A tibble: 2 × 5</span></span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># A tibble: 2 × 5</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> SUMMARY DTSTART DTEND LOCATION UID </span> <span class="r-out co"><span class="r-pr">#&gt;</span> SUMMARY DTSTART DTEND LOCATION UID </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494; font-style: italic;">&lt;glue&gt;</span> <span style="color: #949494; font-style: italic;">&lt;dttm&gt;</span> <span style="color: #949494; font-style: italic;">&lt;dttm&gt;</span> <span style="color: #949494; font-style: italic;">&lt;chr&gt;</span> <span style="color: #949494; font-style: italic;">&lt;chr&gt;</span> </span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494; font-style: italic;">&lt;glue&gt;</span> <span style="color: #949494; font-style: italic;">&lt;dttm&gt;</span> <span style="color: #949494; font-style: italic;">&lt;dttm&gt;</span> <span style="color: #949494; font-style: italic;">&lt;chr&gt;</span> <span style="color: #949494; font-style: italic;">&lt;chr&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">1</span> ID 1 [A] 2024-02-05 <span style="color: #949494;">20:45:57</span> 2024-02-05 <span style="color: #949494;">22:45:57</span> 111 ical-6058ef88-8df2-…</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">1</span> ID 1 [A] 2024-02-06 <span style="color: #949494;">13:27:42</span> 2024-02-06 <span style="color: #949494;">15:27:42</span> 111 ical-6058ef88-8df2-…</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">2</span> ID 3 [A] 2024-02-07 <span style="color: #949494;">20:45:57</span> 2024-02-07 <span style="color: #949494;">22:45:57</span> 111 ical-8d9bc2f4-09ef-…</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">2</span> ID 3 [A] 2024-02-08 <span style="color: #949494;">13:27:42</span> 2024-02-08 <span style="color: #949494;">15:27:42</span> 111 ical-8d9bc2f4-09ef-…</span>
<span class="r-in"><span><span class="va">df</span> <span class="op">|&gt;</span> <span class="fu">ds2ical</span><span class="op">(</span>summary.glue.string <span class="op">=</span> <span class="st">"ID {id} [{assessor}] {note}"</span><span class="op">)</span></span></span> <span class="r-in"><span><span class="va">df</span> <span class="op">|&gt;</span> <span class="fu">ds2ical</span><span class="op">(</span>summary.glue.string <span class="op">=</span> <span class="st">"ID {id} [{assessor}] {note}"</span><span class="op">)</span></span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># A tibble: 2 × 5</span></span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># A tibble: 2 × 5</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> SUMMARY DTSTART DTEND LOCATION UID </span> <span class="r-out co"><span class="r-pr">#&gt;</span> SUMMARY DTSTART DTEND LOCATION UID </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494; font-style: italic;">&lt;glue&gt;</span> <span style="color: #949494; font-style: italic;">&lt;dttm&gt;</span> <span style="color: #949494; font-style: italic;">&lt;dttm&gt;</span> <span style="color: #949494; font-style: italic;">&lt;chr&gt;</span> <span style="color: #949494; font-style: italic;">&lt;chr&gt;</span> </span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494; font-style: italic;">&lt;glue&gt;</span> <span style="color: #949494; font-style: italic;">&lt;dttm&gt;</span> <span style="color: #949494; font-style: italic;">&lt;dttm&gt;</span> <span style="color: #949494; font-style: italic;">&lt;chr&gt;</span> <span style="color: #949494; font-style: italic;">&lt;chr&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">1</span> ID 1 [A] 2024-02-05 <span style="color: #949494;">20:45:57</span> 2024-02-05 <span style="color: #949494;">22:45:57</span> 111 ical-8be1a95c-5…</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">1</span> ID 1 [A] 2024-02-06 <span style="color: #949494;">13:27:42</span> 2024-02-06 <span style="color: #949494;">15:27:42</span> 111 ical-8be1a95c-5…</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">2</span> ID 3 [A] OBS 2024-02-07 <span style="color: #949494;">20:45:57</span> 2024-02-07 <span style="color: #949494;">22:45:57</span> 111 ical-5a05f23b-f…</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">2</span> ID 3 [A] OBS 2024-02-08 <span style="color: #949494;">13:27:42</span> 2024-02-08 <span style="color: #949494;">15:27:42</span> 111 ical-5a05f23b-f…</span>
<span class="r-in"><span><span class="co"># Export .ics file: (not run)</span></span></span> <span class="r-in"><span><span class="co"># Export .ics file: (not run)</span></span></span>
<span class="r-in"><span><span class="va">ical</span> <span class="op">&lt;-</span> <span class="va">df</span> <span class="op">|&gt;</span> <span class="fu">ds2ical</span><span class="op">(</span><span class="va">start</span>, <span class="va">end</span>, <span class="va">location</span>, description.glue.string <span class="op">=</span> <span class="st">"{note}"</span><span class="op">)</span></span></span> <span class="r-in"><span><span class="va">ical</span> <span class="op">&lt;-</span> <span class="va">df</span> <span class="op">|&gt;</span> <span class="fu">ds2ical</span><span class="op">(</span><span class="va">start</span>, <span class="va">end</span>, <span class="va">location</span>, description.glue.string <span class="op">=</span> <span class="st">"{note}"</span><span class="op">)</span></span></span>
<span class="r-in"><span><span class="co"># ical |&gt; calendar::ic_write(file=here::here("calendar.ics"))</span></span></span> <span class="r-in"><span><span class="co"># ical |&gt; calendar::ic_write(file=here::here("calendar.ics"))</span></span></span>

2
reference/easy_redcap.html
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@ -64,7 +64,7 @@
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2> <h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
<dl><dt>project.name</dt> <dl><dt>project.name</dt>
<dd><p>The name of the current project (for key storage with <dd><p>The name of the current project (for key storage with
`keyring::key_set()`)</p></dd> `keyring::key_set()`, using the default keyring)</p></dd>
<dt>widen.data</dt> <dt>widen.data</dt>

95
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@ -0,0 +1,95 @@
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<img src="../logo.png" class="logo" alt=""><h1>Get the id name</h1>
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/REDCapCAST/blob/HEAD/R/utils.r" class="external-link"><code>R/utils.r</code></a></small>
<div class="d-none name"><code>get_id_name.Rd</code></div>
</div>
<div class="ref-description section level2">
<p>Get the id name</p>
</div>
<div class="section level2">
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">get_id_name</span><span class="op">(</span><span class="va">data</span><span class="op">)</span></span></code></pre></div>
</div>
<div class="section level2">
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
<dl><dt>data</dt>
<dd><p>data frame or list</p></dd>
</dl></div>
<div class="section level2">
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
<p>character vector</p>
</div>
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42
reference/guess_time_only_filter.html
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@ -106,31 +106,37 @@ has to be converted to character class before REDCap upload.</p>
<span class="r-out co"><span class="r-pr">#&gt;</span> [1] "inclusion_time"</span> <span class="r-out co"><span class="r-pr">#&gt;</span> [1] "inclusion_time"</span>
<span class="r-in"><span><span class="va">data</span> <span class="op">|&gt;</span> <span class="fu">guess_time_only_filter</span><span class="op">(</span>validate <span class="op">=</span> <span class="cn">TRUE</span><span class="op">)</span> <span class="op">|&gt;</span> <span class="fu"><a href="https://rdrr.io/r/base/lapply.html" class="external-link">lapply</a></span><span class="op">(</span><span class="va">head</span><span class="op">)</span></span></span> <span class="r-in"><span><span class="va">data</span> <span class="op">|&gt;</span> <span class="fu">guess_time_only_filter</span><span class="op">(</span>validate <span class="op">=</span> <span class="cn">TRUE</span><span class="op">)</span> <span class="op">|&gt;</span> <span class="fu"><a href="https://rdrr.io/r/base/lapply.html" class="external-link">lapply</a></span><span class="op">(</span><span class="va">head</span><span class="op">)</span></span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> $is.POSIX</span> <span class="r-out co"><span class="r-pr">#&gt;</span> $is.POSIX</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># A tibble: 6 × 2</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> inclusion_time event_datetime </span> <span class="r-out co"><span class="r-pr">#&gt;</span> inclusion_time event_datetime </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 1 12:38:49 &lt;NA&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494; font-style: italic;">&lt;time&gt;</span> <span style="color: #949494; font-style: italic;">&lt;dttm&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 2 10:38:57 &lt;NA&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">1</span> 12<span style="color: #949494;">:</span>38<span style="color: #949494;">:</span>49 <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 3 NA &lt;NA&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">2</span> 10<span style="color: #949494;">:</span>38<span style="color: #949494;">:</span>57 <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 4 NA 2024-01-18 12:49:42</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">3</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 5 12:01:07 &lt;NA&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">4</span> <span style="color: #BB0000;">NA</span> 2024-01-18 <span style="color: #949494;">12:49:42</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 6 NA &lt;NA&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">5</span> 12<span style="color: #949494;">:</span>01<span style="color: #949494;">:</span>07 <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">6</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span> <span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> $is.datetime</span> <span class="r-out co"><span class="r-pr">#&gt;</span> $is.datetime</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># A tibble: 6 × 1</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> event_datetime </span> <span class="r-out co"><span class="r-pr">#&gt;</span> event_datetime </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 1 &lt;NA&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494; font-style: italic;">&lt;dttm&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 2 &lt;NA&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">1</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 3 &lt;NA&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">2</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 4 2024-01-18 12:49:42</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">3</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 5 &lt;NA&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">4</span> 2024-01-18 <span style="color: #949494;">12:49:42</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 6 &lt;NA&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">5</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">6</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span> <span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> $is.time_only</span> <span class="r-out co"><span class="r-pr">#&gt;</span> $is.time_only</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># A tibble: 6 × 1</span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> inclusion_time</span> <span class="r-out co"><span class="r-pr">#&gt;</span> inclusion_time</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 1 12:38:49</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494; font-style: italic;">&lt;time&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 2 10:38:57</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">1</span> 12<span style="color: #949494;">:</span>38<span style="color: #949494;">:</span>49 </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 3 NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">2</span> 10<span style="color: #949494;">:</span>38<span style="color: #949494;">:</span>57 </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 4 NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">3</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 5 12:01:07</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">4</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 6 NA</span> <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">5</span> 12<span style="color: #949494;">:</span>01<span style="color: #949494;">:</span>07 </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">6</span> <span style="color: #BB0000;">NA</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span> <span class="r-out co"><span class="r-pr">#&gt;</span> </span>
</code></pre></div> </code></pre></div>
</div> </div>

10
reference/index.html
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@ -107,6 +107,11 @@
<dd>Retrieve project API key if stored, if not, set and retrieve</dd> <dd>Retrieve project API key if stored, if not, set and retrieve</dd>
</dl><dl><dt> </dl><dl><dt>
<code><a href="get_id_name.html">get_id_name()</a></code>
</dt>
<dd>Get the id name</dd>
</dl><dl><dt>
<code><a href="guess_time_only_filter.html">guess_time_only_filter()</a></code> <code><a href="guess_time_only_filter.html">guess_time_only_filter()</a></code>
</dt> </dt>
<dd>Try at determining which are true time only variables</dd> <dd>Try at determining which are true time only variables</dd>
@ -117,6 +122,11 @@
<dd>Change "hms" to "character" for REDCap upload.</dd> <dd>Change "hms" to "character" for REDCap upload.</dd>
</dl><dl><dt> </dl><dl><dt>
<code><a href="is.repeated_longitudinal.html">is.repeated_longitudinal()</a></code>
</dt>
<dd>Test if repeatable or longitudinal</dd>
</dl><dl><dt>
<code><a href="mark_complete.html">mark_complete()</a></code> <code><a href="mark_complete.html">mark_complete()</a></code>
</dt> </dt>
<dd>Completion marking based on completed upload</dd> <dd>Completion marking based on completed upload</dd>

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@ -0,0 +1,113 @@
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<img src="../logo.png" class="logo" alt=""><h1>Test if repeatable or longitudinal</h1>
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/REDCapCAST/blob/HEAD/R/utils.r" class="external-link"><code>R/utils.r</code></a></small>
<div class="d-none name"><code>is.repeated_longitudinal.Rd</code></div>
</div>
<div class="ref-description section level2">
<p>Test if repeatable or longitudinal</p>
</div>
<div class="section level2">
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">is.repeated_longitudinal</span><span class="op">(</span></span>
<span> <span class="va">data</span>,</span>
<span> generics <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"redcap_event_name"</span>, <span class="st">"redcap_repeat_instrument"</span>, <span class="st">"redcap_repeat_instance"</span><span class="op">)</span></span>
<span><span class="op">)</span></span></code></pre></div>
</div>
<div class="section level2">
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
<dl><dt>data</dt>
<dd><p>data set</p></dd>
<dt>generics</dt>
<dd><p>default is "redcap_event_name", "redcap_repeat_instrument"
and "redcap_repeat_instance"</p></dd>
</dl></div>
<div class="section level2">
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
<p>logical</p>
</div>
<div class="section level2">
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="fu">is.repeated_longitudinal</span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"record_id"</span>, <span class="st">"age"</span>, <span class="st">"record_id"</span>, <span class="st">"gender"</span><span class="op">)</span><span class="op">)</span></span></span>
<span class="r-err co"><span class="r-pr">#&gt;</span> <span class="error">Error in is.repeated_longitudinal(c("record_id", "age", "record_id", "gender")):</span> could not find function "is.repeated_longitudinal"</span>
<span class="r-in"><span><span class="fu">is.repeated_longitudinal</span><span class="op">(</span><span class="va">redcapcast_data</span><span class="op">)</span></span></span>
<span class="r-err co"><span class="r-pr">#&gt;</span> <span class="error">Error in is.repeated_longitudinal(redcapcast_data):</span> could not find function "is.repeated_longitudinal"</span>
<span class="r-in"><span><span class="fu">is.repeated_longitudinal</span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/list.html" class="external-link">list</a></span><span class="op">(</span><span class="va">redcapcast_data</span><span class="op">)</span><span class="op">)</span></span></span>
<span class="r-err co"><span class="r-pr">#&gt;</span> <span class="error">Error in is.repeated_longitudinal(list(redcapcast_data)):</span> could not find function "is.repeated_longitudinal"</span>
</code></pre></div>
</div>
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3
reference/read_redcap_tables.html
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@ -77,8 +77,7 @@ instruments.</p>
<span> events <span class="op">=</span> <span class="cn">NULL</span>,</span> <span> events <span class="op">=</span> <span class="cn">NULL</span>,</span>
<span> forms <span class="op">=</span> <span class="cn">NULL</span>,</span> <span> forms <span class="op">=</span> <span class="cn">NULL</span>,</span>
<span> raw_or_label <span class="op">=</span> <span class="st">"label"</span>,</span> <span> raw_or_label <span class="op">=</span> <span class="st">"label"</span>,</span>
<span> split_forms <span class="op">=</span> <span class="st">"all"</span>,</span> <span> split_forms <span class="op">=</span> <span class="st">"all"</span></span>
<span> generics <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"redcap_event_name"</span>, <span class="st">"redcap_repeat_instrument"</span>, <span class="st">"redcap_repeat_instance"</span><span class="op">)</span></span>
<span><span class="op">)</span></span></code></pre></div> <span><span class="op">)</span></span></code></pre></div>
</div> </div>

48
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@ -61,7 +61,7 @@ Handles longitudinal projects, but not yet repeated instruments.</p>
<div class="section level2"> <div class="section level2">
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2> <h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">redcap_wider</span><span class="op">(</span></span> <div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">redcap_wider</span><span class="op">(</span></span>
<span> <span class="va">list</span>,</span> <span> <span class="va">data</span>,</span>
<span> event.glue <span class="op">=</span> <span class="st">"{.value}_{redcap_event_name}"</span>,</span> <span> event.glue <span class="op">=</span> <span class="st">"{.value}_{redcap_event_name}"</span>,</span>
<span> inst.glue <span class="op">=</span> <span class="st">"{.value}_{redcap_repeat_instance}"</span></span> <span> inst.glue <span class="op">=</span> <span class="st">"{.value}_{redcap_repeat_instance}"</span></span>
<span><span class="op">)</span></span></code></pre></div> <span><span class="op">)</span></span></code></pre></div>
@ -69,7 +69,7 @@ Handles longitudinal projects, but not yet repeated instruments.</p>
<div class="section level2"> <div class="section level2">
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2> <h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
<dl><dt>list</dt> <dl><dt>data</dt>
<dd><p>A list of data frames.</p></dd> <dd><p>A list of data frames.</p></dd>
@ -90,17 +90,57 @@ Handles longitudinal projects, but not yet repeated instruments.</p>
<div class="section level2"> <div class="section level2">
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2> <h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="va">list</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/base/list.html" class="external-link">list</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/data.frame.html" class="external-link">data.frame</a></span><span class="op">(</span>record_id <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">1</span>,<span class="fl">2</span>,<span class="fl">1</span>,<span class="fl">2</span><span class="op">)</span>,</span></span> <div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="co"># Longitudinal</span></span></span>
<span class="r-in"><span><span class="va">list1</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/base/list.html" class="external-link">list</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/data.frame.html" class="external-link">data.frame</a></span><span class="op">(</span>record_id <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">1</span>,<span class="fl">2</span>,<span class="fl">1</span>,<span class="fl">2</span><span class="op">)</span>,</span></span>
<span class="r-in"><span>redcap_event_name <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"baseline"</span>, <span class="st">"baseline"</span>, <span class="st">"followup"</span>, <span class="st">"followup"</span><span class="op">)</span>,</span></span> <span class="r-in"><span>redcap_event_name <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"baseline"</span>, <span class="st">"baseline"</span>, <span class="st">"followup"</span>, <span class="st">"followup"</span><span class="op">)</span>,</span></span>
<span class="r-in"><span>age <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">25</span>,<span class="fl">26</span>,<span class="fl">27</span>,<span class="fl">28</span><span class="op">)</span><span class="op">)</span>,</span></span> <span class="r-in"><span>age <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">25</span>,<span class="fl">26</span>,<span class="fl">27</span>,<span class="fl">28</span><span class="op">)</span><span class="op">)</span>,</span></span>
<span class="r-in"><span><span class="fu"><a href="https://rdrr.io/r/base/data.frame.html" class="external-link">data.frame</a></span><span class="op">(</span>record_id <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">1</span>,<span class="fl">2</span><span class="op">)</span>,</span></span> <span class="r-in"><span><span class="fu"><a href="https://rdrr.io/r/base/data.frame.html" class="external-link">data.frame</a></span><span class="op">(</span>record_id <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">1</span>,<span class="fl">2</span><span class="op">)</span>,</span></span>
<span class="r-in"><span>redcap_event_name <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"baseline"</span>, <span class="st">"baseline"</span><span class="op">)</span>,</span></span> <span class="r-in"><span>redcap_event_name <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"baseline"</span>, <span class="st">"baseline"</span><span class="op">)</span>,</span></span>
<span class="r-in"><span>gender <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"male"</span>, <span class="st">"female"</span><span class="op">)</span><span class="op">)</span><span class="op">)</span></span></span> <span class="r-in"><span>gender <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"male"</span>, <span class="st">"female"</span><span class="op">)</span><span class="op">)</span><span class="op">)</span></span></span>
<span class="r-in"><span><span class="fu">redcap_wider</span><span class="op">(</span><span class="va">list</span><span class="op">)</span></span></span> <span class="r-in"><span><span class="fu">redcap_wider</span><span class="op">(</span><span class="va">list1</span><span class="op">)</span></span></span>
<span class="r-msg co"><span class="r-pr">#&gt;</span> Joining with `by = join_by(record_id)`</span> <span class="r-msg co"><span class="r-pr">#&gt;</span> Joining with `by = join_by(record_id)`</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> record_id age_baseline age_followup gender</span> <span class="r-out co"><span class="r-pr">#&gt;</span> record_id age_baseline age_followup gender</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 1 1 25 27 male</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 1 1 25 27 male</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 2 2 26 28 female</span> <span class="r-out co"><span class="r-pr">#&gt;</span> 2 2 26 28 female</span>
<span class="r-in"><span><span class="co"># Simpel with two instruments</span></span></span>
<span class="r-in"><span><span class="va">list2</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/base/list.html" class="external-link">list</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/data.frame.html" class="external-link">data.frame</a></span><span class="op">(</span>record_id <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">1</span>,<span class="fl">2</span><span class="op">)</span>,</span></span>
<span class="r-in"><span>age <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">25</span>,<span class="fl">26</span><span class="op">)</span><span class="op">)</span>,</span></span>
<span class="r-in"><span><span class="fu"><a href="https://rdrr.io/r/base/data.frame.html" class="external-link">data.frame</a></span><span class="op">(</span>record_id <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">1</span>,<span class="fl">2</span><span class="op">)</span>,</span></span>
<span class="r-in"><span>gender <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"male"</span>, <span class="st">"female"</span><span class="op">)</span><span class="op">)</span><span class="op">)</span></span></span>
<span class="r-in"><span><span class="fu">redcap_wider</span><span class="op">(</span><span class="va">list2</span><span class="op">)</span></span></span>
<span class="r-msg co"><span class="r-pr">#&gt;</span> Joining with `by = join_by(record_id)`</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> record_id age gender</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 1 1 25 male</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 2 2 26 female</span>
<span class="r-in"><span><span class="co"># Simple with single instrument</span></span></span>
<span class="r-in"><span><span class="va">list3</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/base/list.html" class="external-link">list</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/data.frame.html" class="external-link">data.frame</a></span><span class="op">(</span>record_id <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">1</span>,<span class="fl">2</span><span class="op">)</span>,</span></span>
<span class="r-in"><span>age <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">25</span>,<span class="fl">26</span><span class="op">)</span><span class="op">)</span><span class="op">)</span></span></span>
<span class="r-in"><span><span class="fu">redcap_wider</span><span class="op">(</span><span class="va">list3</span><span class="op">)</span></span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> record_id age</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 1 1 25</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 2 2 26</span>
<span class="r-in"><span><span class="co"># Longitudinal with repeatable instruments</span></span></span>
<span class="r-in"><span><span class="va">list4</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/base/list.html" class="external-link">list</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/data.frame.html" class="external-link">data.frame</a></span><span class="op">(</span>record_id <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">1</span>,<span class="fl">2</span>,<span class="fl">1</span>,<span class="fl">2</span><span class="op">)</span>,</span></span>
<span class="r-in"><span>redcap_event_name <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"baseline"</span>, <span class="st">"baseline"</span>, <span class="st">"followup"</span>, <span class="st">"followup"</span><span class="op">)</span>,</span></span>
<span class="r-in"><span>age <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">25</span>,<span class="fl">26</span>,<span class="fl">27</span>,<span class="fl">28</span><span class="op">)</span><span class="op">)</span>,</span></span>
<span class="r-in"><span><span class="fu"><a href="https://rdrr.io/r/base/data.frame.html" class="external-link">data.frame</a></span><span class="op">(</span>record_id <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">1</span>,<span class="fl">1</span>,<span class="fl">1</span>,<span class="fl">1</span>,<span class="fl">2</span>,<span class="fl">2</span>,<span class="fl">2</span>,<span class="fl">2</span><span class="op">)</span>,</span></span>
<span class="r-in"><span>redcap_event_name <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"baseline"</span>, <span class="st">"baseline"</span>, <span class="st">"followup"</span>, <span class="st">"followup"</span>,</span></span>
<span class="r-in"><span><span class="st">"baseline"</span>, <span class="st">"baseline"</span>, <span class="st">"followup"</span>, <span class="st">"followup"</span><span class="op">)</span>,</span></span>
<span class="r-in"><span>redcap_repeat_instrument <span class="op">=</span> <span class="st">"walk"</span>,</span></span>
<span class="r-in"><span>redcap_repeat_instance<span class="op">=</span><span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">1</span>,<span class="fl">2</span>,<span class="fl">1</span>,<span class="fl">2</span>,<span class="fl">1</span>,<span class="fl">2</span>,<span class="fl">1</span>,<span class="fl">2</span><span class="op">)</span>,</span></span>
<span class="r-in"><span>dist <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">40</span>, <span class="fl">32</span>, <span class="fl">25</span>, <span class="fl">33</span>, <span class="fl">28</span>, <span class="fl">24</span>, <span class="fl">23</span>, <span class="fl">36</span><span class="op">)</span><span class="op">)</span>,</span></span>
<span class="r-in"><span><span class="fu"><a href="https://rdrr.io/r/base/data.frame.html" class="external-link">data.frame</a></span><span class="op">(</span>record_id <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">1</span>,<span class="fl">2</span><span class="op">)</span>,</span></span>
<span class="r-in"><span>redcap_event_name <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"baseline"</span>, <span class="st">"baseline"</span><span class="op">)</span>,</span></span>
<span class="r-in"><span>gender <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"male"</span>, <span class="st">"female"</span><span class="op">)</span><span class="op">)</span><span class="op">)</span></span></span>
<span class="r-in"><span><span class="fu">redcap_wider</span><span class="op">(</span><span class="va">list4</span><span class="op">)</span></span></span>
<span class="r-msg co"><span class="r-pr">#&gt;</span> Joining with `by = join_by(record_id)`</span>
<span class="r-msg co"><span class="r-pr">#&gt;</span> Joining with `by = join_by(record_id)`</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> record_id age_baseline age_followup dist_1_baseline dist_1_followup</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 1 1 25 27 40 25</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 2 2 26 28 28 23</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> dist_2_baseline dist_2_followup gender</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 1 32 33 male</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 2 24 36 female</span>
</code></pre></div> </code></pre></div>
</div> </div>
</main><aside class="col-md-3"><nav id="toc"><h2>On this page</h2> </main><aside class="col-md-3"><nav id="toc"><h2>On this page</h2>

2
reference/sanitize_split.html
View File

@ -59,7 +59,7 @@
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2> <h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">sanitize_split</span><span class="op">(</span></span> <div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">sanitize_split</span><span class="op">(</span></span>
<span> <span class="va">l</span>,</span> <span> <span class="va">l</span>,</span>
<span> generic.names <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"record_id"</span>, <span class="st">"redcap_event_name"</span>, <span class="st">"redcap_repeat_instrument"</span>,</span> <span> generic.names <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"redcap_event_name"</span>, <span class="st">"redcap_repeat_instrument"</span>,</span>
<span> <span class="st">"redcap_repeat_instance"</span><span class="op">)</span></span> <span> <span class="st">"redcap_repeat_instance"</span><span class="op">)</span></span>
<span><span class="op">)</span></span></code></pre></div> <span><span class="op">)</span></span></code></pre></div>
</div> </div>

6
reference/split_non_repeating_forms.html
View File

@ -99,10 +99,12 @@ be included in each form</p></dd>
<span class="r-in"><span></span></span> <span class="r-in"><span></span></span>
<span class="r-in"><span><span class="co"># Create the fields</span></span></span> <span class="r-in"><span><span class="co"># Create the fields</span></span></span>
<span class="r-in"><span><span class="va">fields</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/base/matrix.html" class="external-link">matrix</a></span><span class="op">(</span></span></span> <span class="r-in"><span><span class="va">fields</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/base/matrix.html" class="external-link">matrix</a></span><span class="op">(</span></span></span>
<span class="r-in"><span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"form_a_name"</span>, <span class="st">"form_a"</span>,</span></span> <span class="r-in"><span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span></span></span>
<span class="r-in"><span> <span class="st">"form_a_name"</span>, <span class="st">"form_a"</span>,</span></span>
<span class="r-in"><span> <span class="st">"form_a_age"</span>, <span class="st">"form_a"</span>,</span></span> <span class="r-in"><span> <span class="st">"form_a_age"</span>, <span class="st">"form_a"</span>,</span></span>
<span class="r-in"><span> <span class="st">"form_b_name"</span>, <span class="st">"form_b"</span>,</span></span> <span class="r-in"><span> <span class="st">"form_b_name"</span>, <span class="st">"form_b"</span>,</span></span>
<span class="r-in"><span> <span class="st">"form_b_gender"</span>, <span class="st">"form_b"</span><span class="op">)</span>,</span></span> <span class="r-in"><span> <span class="st">"form_b_gender"</span>, <span class="st">"form_b"</span></span></span>
<span class="r-in"><span> <span class="op">)</span>,</span></span>
<span class="r-in"><span> ncol <span class="op">=</span> <span class="fl">2</span>, byrow <span class="op">=</span> <span class="cn">TRUE</span></span></span> <span class="r-in"><span> ncol <span class="op">=</span> <span class="fl">2</span>, byrow <span class="op">=</span> <span class="cn">TRUE</span></span></span>
<span class="r-in"><span><span class="op">)</span></span></span> <span class="r-in"><span><span class="op">)</span></span></span>
<span class="r-in"><span></span></span> <span class="r-in"><span></span></span>

2
search.json
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File diff suppressed because one or more lines are too long

6
sitemap.xml
View File

@ -48,6 +48,9 @@
<url> <url>
<loc>https://agdamsbo.github.io/REDCapCAST/reference/get_api_key.html</loc> <loc>https://agdamsbo.github.io/REDCapCAST/reference/get_api_key.html</loc>
</url> </url>
<url>
<loc>https://agdamsbo.github.io/REDCapCAST/reference/get_id_name.html</loc>
</url>
<url> <url>
<loc>https://agdamsbo.github.io/REDCapCAST/reference/guess_time_only_filter.html</loc> <loc>https://agdamsbo.github.io/REDCapCAST/reference/guess_time_only_filter.html</loc>
</url> </url>
@ -57,6 +60,9 @@
<url> <url>
<loc>https://agdamsbo.github.io/REDCapCAST/reference/index.html</loc> <loc>https://agdamsbo.github.io/REDCapCAST/reference/index.html</loc>
</url> </url>
<url>
<loc>https://agdamsbo.github.io/REDCapCAST/reference/is.repeated_longitudinal.html</loc>
</url>
<url> <url>
<loc>https://agdamsbo.github.io/REDCapCAST/reference/mark_complete.html</loc> <loc>https://agdamsbo.github.io/REDCapCAST/reference/mark_complete.html</loc>
</url> </url>