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@ -73,7 +73,9 @@
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<div class="sourceCode" id="cb1"><pre class="downlit sourceCode r">
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<code class="sourceCode R"><span><span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va"><a href="https://github.com/agdamsbo/REDCapCAST" class="external-link">REDCapCAST</a></span><span class="op">)</span></span></code></pre></div>
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<code class="sourceCode R"><span><span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va"><a href="https://github.com/agdamsbo/REDCapCAST" class="external-link">REDCapCAST</a></span><span class="op">)</span></span>
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<span><span class="co">#> Error in get(paste0(generic, ".", class), envir = get_method_env()) : </span></span>
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<span><span class="co">#> object 'type_sum.accel' not found</span></span></code></pre></div>
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<div class="section level2">
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<h2 id="two-different-ways-to-create-a-data-base">Two different ways to create a data base<a class="anchor" aria-label="anchor" href="#two-different-ways-to-create-a-data-base"></a>
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</h2>
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@ -73,7 +73,9 @@
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<div class="sourceCode" id="cb1"><pre class="downlit sourceCode r">
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<code class="sourceCode R"><span><span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va"><a href="https://github.com/agdamsbo/REDCapCAST" class="external-link">REDCapCAST</a></span><span class="op">)</span></span></code></pre></div>
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<code class="sourceCode R"><span><span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va"><a href="https://github.com/agdamsbo/REDCapCAST" class="external-link">REDCapCAST</a></span><span class="op">)</span></span>
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<span><span class="co">#> Error in get(paste0(generic, ".", class), envir = get_method_env()) : </span></span>
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<span><span class="co">#> object 'type_sum.accel' not found</span></span></code></pre></div>
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<p>This vignette covers the basics to get you started with the two basic
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features of REDCapCAST:</p>
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<ul>
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@ -82,6 +82,8 @@ and launch the app as follows:</p>
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<code><a href="../reference/ds2dd_detailed.html">ds2dd_detailed()</a></code>.</p>
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<div class="sourceCode" id="cb2"><pre class="downlit sourceCode r">
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<code class="sourceCode R"><span><span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va"><a href="https://github.com/agdamsbo/REDCapCAST" class="external-link">REDCapCAST</a></span><span class="op">)</span></span>
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<span><span class="co">#> Error in get(paste0(generic, ".", class), envir = get_method_env()) : </span></span>
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<span><span class="co">#> object 'type_sum.accel' not found</span></span>
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<span><span class="va">ds</span> <span class="op"><-</span> <span class="fu"><a href="../reference/REDCap_split.html">REDCap_split</a></span><span class="op">(</span></span>
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<span> records <span class="op">=</span> <span class="va">redcapcast_data</span>,</span>
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<span> metadata <span class="op">=</span> <span class="va">redcapcast_meta</span>,</span>
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@ -38,7 +38,11 @@
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</div>
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<div class="section level2">
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<h2 class="pkg-version" data-toc-text="24.11.4" id="redcapcast-24114">REDCapCAST 24.11.4<a class="anchor" aria-label="anchor" href="#redcapcast-24114"></a></h2>
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<h2 class="pkg-version" data-toc-text="24.12.2" id="redcapcast-24122">REDCapCAST 24.12.2<a class="anchor" aria-label="anchor" href="#redcapcast-24122"></a></h2>
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<p>The newly introduced extension of <code><a href="https://forcats.tidyverse.org/reference/fct_drop.html" class="external-link">forcats::fct_drop()</a></code> has been corrected to work as intended as a method.</p>
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</div>
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<div class="section level2">
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<h2 class="pkg-version" data-toc-text="24.12.1" id="redcapcast-24121">REDCapCAST 24.12.1<a class="anchor" aria-label="anchor" href="#redcapcast-24121"></a></h2><p class="text-muted">CRAN release: 2024-12-02</p>
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<p>This release attempts to solve problems hosting the shiny_cast app, while also implementing functions to preserve as much meta data as possible from the REDCap database when exporting data.</p>
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<p>The hosting on shinyapps.io has given a lot of trouble recently. Modified package structure a little around the <code><a href="../reference/shiny_cast.html">shiny_cast()</a></code>, to accommodate an alternative hosting approach with all package functions included in a script instead of requiring the package.</p>
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<ul><li><p>NEW: A new option to <code>raw_or_label</code> in <code>read_readcap_tables()</code> has been added: “both”. Get raw values with REDCap labels applied as labels. Use <code><a href="../reference/as_factor.html">as_factor()</a></code> to format factors with original labels and use the <code>gtsummary</code> package to easily get beautiful tables with original labels from REDCap. Use <code><a href="../reference/fct_drop.html">fct_drop()</a></code> to drop empty levels.</p></li>
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@ -5,7 +5,7 @@ articles:
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Database-creation: Database-creation.html
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REDCapCAST: REDCapCAST.html
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Shiny-app: Shiny-app.html
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last_built: 2024-12-04T07:16Z
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last_built: 2024-12-19T20:23Z
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urls:
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reference: https://agdamsbo.github.io/REDCapCAST/reference
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article: https://agdamsbo.github.io/REDCapCAST/articles
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8
reference/fct_drop.factor.html
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8
reference/fct_drop.factor.html
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<html>
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<head>
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<meta http-equiv="refresh" content="0;URL=https://agdamsbo.github.io/REDCapCAST/reference/fct_drop.html" />
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<meta name="robots" content="noindex">
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<link rel="canonical" href="https://agdamsbo.github.io/REDCapCAST/reference/fct_drop.html">
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</head>
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</html>
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@ -1,7 +1,7 @@
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<!DOCTYPE html>
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<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><title>Drop unused levels preserving label data — fct_drop • REDCapCAST</title><!-- favicons --><link rel="icon" type="image/png" sizes="16x16" href="../favicon-16x16.png"><link rel="icon" type="image/png" sizes="32x32" href="../favicon-32x32.png"><link rel="apple-touch-icon" type="image/png" sizes="180x180" href="../apple-touch-icon.png"><link rel="apple-touch-icon" type="image/png" sizes="120x120" href="../apple-touch-icon-120x120.png"><link rel="apple-touch-icon" type="image/png" sizes="76x76" href="../apple-touch-icon-76x76.png"><link rel="apple-touch-icon" type="image/png" sizes="60x60" href="../apple-touch-icon-60x60.png"><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet"><script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><meta property="og:title" content="Drop unused levels preserving label data — fct_drop"><meta name="description" content="This extends [forcats::fct_drop()] to natively work across a data.frame and
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replace [base::droplevels()]."><meta property="og:description" content="This extends [forcats::fct_drop()] to natively work across a data.frame and
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replace [base::droplevels()]."><meta property="og:image" content="https://agdamsbo.github.io/REDCapCAST/logo.png"></head><body>
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replaces [base::droplevels()]."><meta property="og:description" content="This extends [forcats::fct_drop()] to natively work across a data.frame and
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replaces [base::droplevels()]."><meta property="og:image" content="https://agdamsbo.github.io/REDCapCAST/logo.png"></head><body>
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<a href="#main" class="visually-hidden-focusable">Skip to contents</a>
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@ -42,12 +42,18 @@ replace [base::droplevels()]."><meta property="og:image" content="https://agdams
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<div class="ref-description section level2">
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<p>This extends [forcats::fct_drop()] to natively work across a data.frame and
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replace [base::droplevels()].</p>
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replaces [base::droplevels()].</p>
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</div>
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<div class="section level2">
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<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
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<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">fct_drop.data.frame</span><span class="op">(</span><span class="va">x</span>, <span class="va">...</span><span class="op">)</span></span></code></pre></div>
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<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">fct_drop</span><span class="op">(</span><span class="va">x</span>, <span class="va">...</span><span class="op">)</span></span>
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<span></span>
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<span><span class="co"># S3 method for class 'data.frame'</span></span>
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<span><span class="fu">fct_drop</span><span class="op">(</span><span class="va">x</span>, <span class="va">...</span><span class="op">)</span></span>
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<span></span>
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<span><span class="co"># S3 method for class 'factor'</span></span>
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<span><span class="fu">fct_drop</span><span class="op">(</span><span class="va">x</span>, <span class="va">...</span><span class="op">)</span></span></code></pre></div>
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</div>
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<div class="section level2">
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@ -63,6 +69,63 @@ replace [base::droplevels()].</p>
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</dl></div>
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<div class="section level2">
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<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
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<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="va">mtcars</span> <span class="op">|></span></span></span>
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<span class="r-in"><span> <span class="fu"><a href="numchar2fct.html">numchar2fct</a></span><span class="op">(</span><span class="op">)</span> <span class="op">|></span></span></span>
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<span class="r-in"><span> <span class="fu">fct_drop</span><span class="op">(</span><span class="op">)</span></span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># A tibble: 32 × 11</span></span>
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<span class="r-out co"><span class="r-pr">#></span> mpg cyl disp hp drat wt qsec vs am gear carb </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><fct></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><fct></span> <span style="color: #949494; font-style: italic;"><fct></span> <span style="color: #949494; font-style: italic;"><fct></span> <span style="color: #949494; font-style: italic;"><fct></span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 1</span> 21 6 160 110 3.9 2.62 16.5 0 1 4 4 </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 2</span> 21 6 160 110 3.9 2.88 17.0 0 1 4 4 </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 3</span> 22.8 4 108 93 3.85 2.32 18.6 1 1 4 1 </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 4</span> 21.4 6 258 110 3.08 3.22 19.4 1 0 3 1 </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 5</span> 18.7 8 360 175 3.15 3.44 17.0 0 0 3 2 </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 6</span> 18.1 6 225 105 2.76 3.46 20.2 1 0 3 1 </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 7</span> 14.3 8 360 245 3.21 3.57 15.8 0 0 3 4 </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 8</span> 24.4 4 147. 62 3.69 3.19 20 1 0 4 2 </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 9</span> 22.8 4 141. 95 3.92 3.15 22.9 1 0 4 2 </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">10</span> 19.2 6 168. 123 3.92 3.44 18.3 1 0 4 4 </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># ℹ 22 more rows</span></span>
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<span class="r-in"><span><span class="va">mtcars</span> <span class="op">|></span></span></span>
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<span class="r-in"><span> <span class="fu"><a href="numchar2fct.html">numchar2fct</a></span><span class="op">(</span><span class="op">)</span> <span class="op">|></span></span></span>
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<span class="r-in"><span> <span class="fu">dplyr</span><span class="fu">::</span><span class="fu"><a href="https://dplyr.tidyverse.org/reference/mutate.html" class="external-link">mutate</a></span><span class="op">(</span>vs <span class="op">=</span> <span class="fu">fct_drop</span><span class="op">(</span><span class="va">vs</span><span class="op">)</span><span class="op">)</span></span></span>
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<span class="r-out co"><span class="r-pr">#></span> mpg cyl disp hp drat wt qsec vs am gear carb</span>
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<span class="r-out co"><span class="r-pr">#></span> Mazda RX4 21.0 6 160.0 110 3.90 2.620 16.46 0 1 4 4</span>
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<span class="r-out co"><span class="r-pr">#></span> Mazda RX4 Wag 21.0 6 160.0 110 3.90 2.875 17.02 0 1 4 4</span>
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<span class="r-out co"><span class="r-pr">#></span> Datsun 710 22.8 4 108.0 93 3.85 2.320 18.61 1 1 4 1</span>
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<span class="r-out co"><span class="r-pr">#></span> Hornet 4 Drive 21.4 6 258.0 110 3.08 3.215 19.44 1 0 3 1</span>
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<span class="r-out co"><span class="r-pr">#></span> Hornet Sportabout 18.7 8 360.0 175 3.15 3.440 17.02 0 0 3 2</span>
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<span class="r-out co"><span class="r-pr">#></span> Valiant 18.1 6 225.0 105 2.76 3.460 20.22 1 0 3 1</span>
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<span class="r-out co"><span class="r-pr">#></span> Duster 360 14.3 8 360.0 245 3.21 3.570 15.84 0 0 3 4</span>
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||||
<span class="r-out co"><span class="r-pr">#></span> Merc 240D 24.4 4 146.7 62 3.69 3.190 20.00 1 0 4 2</span>
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||||
<span class="r-out co"><span class="r-pr">#></span> Merc 230 22.8 4 140.8 95 3.92 3.150 22.90 1 0 4 2</span>
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||||
<span class="r-out co"><span class="r-pr">#></span> Merc 280 19.2 6 167.6 123 3.92 3.440 18.30 1 0 4 4</span>
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<span class="r-out co"><span class="r-pr">#></span> Merc 280C 17.8 6 167.6 123 3.92 3.440 18.90 1 0 4 4</span>
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<span class="r-out co"><span class="r-pr">#></span> Merc 450SE 16.4 8 275.8 180 3.07 4.070 17.40 0 0 3 3</span>
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<span class="r-out co"><span class="r-pr">#></span> Merc 450SL 17.3 8 275.8 180 3.07 3.730 17.60 0 0 3 3</span>
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||||
<span class="r-out co"><span class="r-pr">#></span> Merc 450SLC 15.2 8 275.8 180 3.07 3.780 18.00 0 0 3 3</span>
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||||
<span class="r-out co"><span class="r-pr">#></span> Cadillac Fleetwood 10.4 8 472.0 205 2.93 5.250 17.98 0 0 3 4</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Lincoln Continental 10.4 8 460.0 215 3.00 5.424 17.82 0 0 3 4</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Chrysler Imperial 14.7 8 440.0 230 3.23 5.345 17.42 0 0 3 4</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Fiat 128 32.4 4 78.7 66 4.08 2.200 19.47 1 1 4 1</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Honda Civic 30.4 4 75.7 52 4.93 1.615 18.52 1 1 4 2</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Toyota Corolla 33.9 4 71.1 65 4.22 1.835 19.90 1 1 4 1</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Toyota Corona 21.5 4 120.1 97 3.70 2.465 20.01 1 0 3 1</span>
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||||
<span class="r-out co"><span class="r-pr">#></span> Dodge Challenger 15.5 8 318.0 150 2.76 3.520 16.87 0 0 3 2</span>
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||||
<span class="r-out co"><span class="r-pr">#></span> AMC Javelin 15.2 8 304.0 150 3.15 3.435 17.30 0 0 3 2</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Camaro Z28 13.3 8 350.0 245 3.73 3.840 15.41 0 0 3 4</span>
|
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<span class="r-out co"><span class="r-pr">#></span> Pontiac Firebird 19.2 8 400.0 175 3.08 3.845 17.05 0 0 3 2</span>
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<span class="r-out co"><span class="r-pr">#></span> Fiat X1-9 27.3 4 79.0 66 4.08 1.935 18.90 1 1 4 1</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Porsche 914-2 26.0 4 120.3 91 4.43 2.140 16.70 0 1 5 2</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Lotus Europa 30.4 4 95.1 113 3.77 1.513 16.90 1 1 5 2</span>
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||||
<span class="r-out co"><span class="r-pr">#></span> Ford Pantera L 15.8 8 351.0 264 4.22 3.170 14.50 0 1 5 4</span>
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<span class="r-out co"><span class="r-pr">#></span> Ferrari Dino 19.7 6 145.0 175 3.62 2.770 15.50 0 1 5 6</span>
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<span class="r-out co"><span class="r-pr">#></span> Maserati Bora 15.0 8 301.0 335 3.54 3.570 14.60 0 1 5 8</span>
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<span class="r-out co"><span class="r-pr">#></span> Volvo 142E 21.4 4 121.0 109 4.11 2.780 18.60 1 1 4 2</span>
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</code></pre></div>
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</div>
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</main><aside class="col-md-3"><nav id="toc" aria-label="Table of contents"><h2>On this page</h2>
|
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</nav></aside></div>
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@ -181,7 +181,7 @@
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<dd>Allows conversion of factor to numeric values preserving original levels</dd>
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</dl><dl><dt>
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<code><a href="fct_drop.html">fct_drop.data.frame()</a></code>
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<code><a href="fct_drop.html">fct_drop()</a></code>
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</dt>
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<dd>Drop unused levels preserving label data</dd>
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