Deploying to gh-pages from @ agdamsbo/REDCapCAST@47fb3fceca 🚀

articles/Shiny-app.html

@@ -344,6 +344,12 @@ based on a set threshold for unique values:</p>
 <code class="sourceCode R"><span><span class="va">ds_parsed</span><span class="op">|&gt;</span></span>
 <span>  <span class="fu"><a href="../reference/numchar2fct.html">numchar2fct</a></span><span class="op">(</span>numeric.threshold <span class="op">=</span> <span class="fl">2</span><span class="op">)</span> <span class="op">|&gt;</span></span>
 <span>  <span class="fu"><a href="https://rdrr.io/r/utils/str.html" class="external-link">str</a></span><span class="op">(</span><span class="op">)</span></span>
+<span><span class="co">#&gt; Warning: There were 13 warnings in `dplyr::mutate()`.</span></span>
+<span><span class="co">#&gt; The first warning was:</span></span>
+<span><span class="co">#&gt; <span style="color: #00BBBB;">ℹ</span> In argument: `dplyr::across(...)`.</span></span>
+<span><span class="co">#&gt; Caused by warning in `.roman2numeric()`:</span></span>
+<span><span class="co">#&gt; <span style="color: #BBBB00;">!</span> invalid roman numerals: inclusion inclusion follow1 follow1 inclusion follow1 follow2 follow1 follow1 follow2 follow2 follow2 inclusion follow1 follow2 follow1 follow1 follow2 follow2 follow2 inclusion follow1 follow1 follow1 inclusion</span></span>
+<span><span class="co">#&gt; <span style="color: #00BBBB;">ℹ</span> Run `dplyr::last_dplyr_warnings()` to see the 12 remaining warnings.</span></span>
 <span><span class="co">#&gt; tibble [25 × 27] (S3: tbl_df/tbl/data.frame)</span></span>
 <span><span class="co">#&gt;  $ record_id                   : num [1:25] 1 2 2 2 3 3 3 3 3 3 ...</span></span>
 <span><span class="co">#&gt;  $ redcap_event_name           : Factor w/ 3 levels "inclusion","follow1",..: 1 1 2 2 1 2 3 2 2 3 ...</span></span>

pkgdown.yml

@@ -5,7 +5,7 @@ articles:
   Database-creation: Database-creation.html
   REDCapCAST: REDCapCAST.html
   Shiny-app: Shiny-app.html
-last_built: 2024-11-20T13:41Z
+last_built: 2024-11-20T14:36Z
 urls:
   reference: https://agdamsbo.github.io/REDCapCAST/reference
   article: https://agdamsbo.github.io/REDCapCAST/articles

reference/as_factor.html

@@ -117,6 +117,7 @@ To avoid redundancy calls and errors, functions are copy-pasted here</p>
     <h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
     <div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="co"># will preserve all attributes</span></span></span>
 <span class="r-in"><span><span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">1</span>, <span class="fl">4</span>, <span class="fl">3</span>, <span class="st">"A"</span>, <span class="fl">7</span>, <span class="fl">8</span>, <span class="fl">1</span><span class="op">)</span> <span class="op">|&gt;</span> <span class="fu">as_factor</span><span class="op">(</span><span class="op">)</span></span></span>
+<span class="r-wrn co"><span class="r-pr">#&gt;</span> <span class="warning">Warning: </span>invalid roman numeral: A</span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> [1] 1 4 3 A 7 8 1</span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> Levels: 1 4 3 A 7 8</span>
 <span class="r-in"><span><span class="fu"><a href="https://rdrr.io/r/base/structure.html" class="external-link">structure</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">1</span>, <span class="fl">2</span>, <span class="fl">3</span>, <span class="fl">2</span>, <span class="fl">10</span>, <span class="fl">9</span><span class="op">)</span>,</span></span>

reference/fct2num.html

@@ -65,6 +65,7 @@
     <div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">1</span>, <span class="fl">4</span>, <span class="fl">3</span>, <span class="st">"A"</span>, <span class="fl">7</span>, <span class="fl">8</span>, <span class="fl">1</span><span class="op">)</span> <span class="op">|&gt;</span></span></span>
 <span class="r-in"><span>  <span class="fu"><a href="as_factor.html">as_factor</a></span><span class="op">(</span><span class="op">)</span> <span class="op">|&gt;</span></span></span>
 <span class="r-in"><span>  <span class="fu">fct2num</span><span class="op">(</span><span class="op">)</span></span></span>
+<span class="r-wrn co"><span class="r-pr">#&gt;</span> <span class="warning">Warning: </span>invalid roman numeral: A</span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> [1] 1 2 3 4 5 6 1</span>
 <span class="r-in"><span></span></span>
 <span class="r-in"><span><span class="fu"><a href="https://rdrr.io/r/base/structure.html" class="external-link">structure</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">1</span>, <span class="fl">2</span>, <span class="fl">3</span>, <span class="fl">2</span>, <span class="fl">10</span>, <span class="fl">9</span><span class="op">)</span>,</span></span>
@@ -96,8 +97,8 @@
 <span class="r-out co"><span class="r-pr">#&gt;</span> 8L, 3L, 3L, 9L, 10L, 1L, 4L, 2L), levels = c("7", "9", "10", </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> "11", "12", "13", "14", "16", "17", "18", "19"), class = "factor")</span>
 <span class="r-in"><span><span class="fu"><a href="named_levels.html">named_levels</a></span><span class="op">(</span><span class="va">v</span><span class="op">)</span></span></span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  7  9 10 11 12 13 14 16 17 18 19 </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  1  2  3  4  5  6  7  8  9 10 11 </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span>  9 11 14 10 13 18  7 19 12 16 17 </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span>  2  4  7  3  6 10  1 11  5  8  9 </span>
 <span class="r-in"><span><span class="fu">fct2num</span><span class="op">(</span><span class="va">v</span><span class="op">)</span></span></span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [1]  9 11 14 10 10 13 18  7 19 12 16 19 16 10 10 17 18  7 11  9</span>
 </code></pre></div>