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Handles longitudinal projects, but not yet repeated instruments.">< title > Redcap Wider — redcap_wider • REDCapCAST< / title > <!-- favicons --> < link rel = "icon" type = "image/png" sizes = "16x16" href = "../favicon-16x16.png" > < link rel = "icon" type = "image/png" sizes = "32x32" href = "../favicon-32x32.png" > < link rel = "apple-touch-icon" type = "image/png" sizes = "180x180" href = "../apple-touch-icon.png" > < link rel = "apple-touch-icon" type = "image/png" sizes = "120x120" href = "../apple-touch-icon-120x120.png" > < link rel = "apple-touch-icon" type = "image/png" sizes = "76x76" href = "../apple-touch-icon-76x76.png" > < link rel = "apple-touch-icon" type = "image/png" sizes = "60x60" href = "../apple-touch-icon-60x60.png" > < script src = "../deps/jquery-3.6.0/jquery-3.6.0.min.js" > < / script > < meta name = "viewport" content = "width=device-width, initial-scale=1, shrink-to-fit=no" > < link href = "../deps/bootstrap-5.3.1/bootstrap.min.css" rel = "stylesheet" > < script src = "../deps/bootstrap-5.3.1/bootstrap.bundle.min.js" > < / script > <!-- Font Awesome icons --> < link rel = "stylesheet" href = "https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.12.1/css/all.min.css" integrity = "sha256-mmgLkCYLUQbXn0B1SRqzHar6dCnv9oZFPEC1g1cwlkk=" crossorigin = "anonymous" > < link rel = "stylesheet" href = "https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.12.1/css/v4-shims.min.css" integrity = "sha256-wZjR52fzng1pJHwx4aV2AO3yyTOXrcDW7jBpJtTwVxw=" crossorigin = "anonymous" > <!-- bootstrap - toc --> < script src = "https://cdn.jsdelivr.net/gh/afeld/bootstrap-toc@v1.0.1/dist/bootstrap-toc.min.js" integrity = "sha256-4veVQbu7//Lk5TSmc7YV48MxtMy98e26cf5MrgZYnwo=" crossorigin = "anonymous" > < / script > <!-- headroom.js --> < script src = "https://cdnjs.cloudflare.com/ajax/libs/headroom/0.11.0/headroom.min.js" integrity = "sha256-AsUX4SJE1+yuDu5+mAVzJbuYNPHj/WroHuZ8Ir/CkE0=" crossorigin = "anonymous" > < / script > < script src = "https://cdnjs.cloudflare.com/ajax/libs/headroom/0.11.0/jQuery.headroom.min.js" integrity = "sha256-ZX/yNShbjqsohH1k95liqY9Gd8uOiE1S4vZc+9KQ1K4=" crossorigin = "anonymous" > < / script > <!-- clipboard.js --> < script src = "https://cdnjs.cloudflare.com/ajax/libs/clipboard.js/2.0.6/clipboard.min.js" integrity = "sha256-inc5kl9MA1hkeYUt+EC3BhlIgyp/2jDIyBLS6k3UxPI=" crossorigin = "anonymous" > < / script > <!-- search --> < script src = "https://cdnjs.cloudflare.com/ajax/libs/fuse.js/6.4.6/fuse.js" integrity = "sha512-zv6Ywkjyktsohkbp9bb45V6tEMoWhzFzXis+LrMehmJZZSys19Yxf1dopHx7WzIKxr5tK2dVcYmaCk2uqdjF4A==" crossorigin = "anonymous" > < / script > < script src = "https://cdnjs.cloudflare.com/ajax/libs/autocomplete.js/0.38.0/autocomplete.jquery.min.js" integrity = "sha512-GU9ayf+66Xx2TmpxqJpliWbT5PiGYxpaG8rfnBEk1LL8l1KGkRShhngwdXK1UgqhAzWpZHSiYPc09/NwDQIGyg==" crossorigin = "anonymous" > < / script > < script src = "https://cdnjs.cloudflare.com/ajax/libs/mark.js/8.11.1/mark.min.js" integrity = "sha512-5CYOlHXGh6QpOFA/TeTylKLWfB3ftPsde7AnmhuitiTX4K5SqCLBeKro6sPS8ilsz1Q4NRx3v8Ko2IBiszzdww==" crossorigin = "anonymous" > < / script > <!-- pkgdown --> < script src = "../pkgdown.js" > < / script > < meta property = "og:title" content = "Redcap Wider — redcap_wider" > < meta property = "og:description" content = "Converts a list of REDCap data frames from long to wide format .
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Handles longitudinal projects, but not yet repeated instruments.">< meta property = "og:image" content = "https://agdamsbo.github.io/REDCapCAST/logo.png" > <!-- mathjax --> < script src = "https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.5/MathJax.js" integrity = "sha256-nvJJv9wWKEm88qvoQl9ekL2J+k/RWIsaSScxxlsrv8k=" crossorigin = "anonymous" > < / script > < script src = "https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.5/config/TeX-AMS-MML_HTMLorMML.js" integrity = "sha256-84DKXVJXs0/F8OTMzX4UR909+jtl4G7SPypPavF+GfA=" crossorigin = "anonymous" > < / script > <!-- [if lt IE 9]>
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< img src = "../logo.png" class = "logo" alt = "" > < h1 > Redcap Wider< / h1 >
< small class = "dont-index" > Source: < a href = "https://github.com/agdamsbo/REDCapCAST/blob/HEAD/R/redcap_wider.R" class = "external-link" > < code > R/redcap_wider.R< / code > < / a > < / small >
< div class = "d-none name" > < code > redcap_wider.Rd< / code > < / div >
< / div >
< div class = "ref-description section level2" >
< p > Converts a list of REDCap data frames from long to wide format.
Handles longitudinal projects, but not yet repeated instruments.< / p >
< / div >
< div class = "section level2" >
< h2 id = "ref-usage" > Usage< a class = "anchor" aria-label = "anchor" href = "#ref-usage" > < / a > < / h2 >
< div class = "sourceCode" > < pre class = "sourceCode r" > < code > < span > < span class = "fu" > redcap_wider< / span > < span class = "op" > (< / span > < / span >
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< span > < span class = "va" > data< / span > ,< / span >
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< span > event.glue < span class = "op" > =< / span > < span class = "st" > "{.value}_{redcap_event_name}"< / span > ,< / span >
< span > inst.glue < span class = "op" > =< / span > < span class = "st" > "{.value}_{redcap_repeat_instance}"< / span > < / span >
< span > < span class = "op" > )< / span > < / span > < / code > < / pre > < / div >
< / div >
< div class = "section level2" >
< h2 id = "arguments" > Arguments< a class = "anchor" aria-label = "anchor" href = "#arguments" > < / a > < / h2 >
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< dl > < dt > data< / dt >
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< dd > < p > A list of data frames.< / p > < / dd >
< dt > event.glue< / dt >
< dd > < p > A dplyr::glue string for repeated events naming< / p > < / dd >
< dt > inst.glue< / dt >
< dd > < p > A dplyr::glue string for repeated instruments naming< / p > < / dd >
< / dl > < / div >
< div class = "section level2" >
< h2 id = "value" > Value< a class = "anchor" aria-label = "anchor" href = "#value" > < / a > < / h2 >
< p > The list of data frames in wide format.< / p >
< / div >
< div class = "section level2" >
< h2 id = "ref-examples" > Examples< a class = "anchor" aria-label = "anchor" href = "#ref-examples" > < / a > < / h2 >
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< div class = "sourceCode" > < pre class = "sourceCode r" > < code > < span class = "r-in" > < span > < span class = "co" > # Longitudinal< / span > < / span > < / span >
< span class = "r-in" > < span > < span class = "va" > list1< / span > < span class = "op" > < -< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/list.html" class = "external-link" > list< / a > < / span > < span class = "op" > (< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/data.frame.html" class = "external-link" > data.frame< / a > < / span > < span class = "op" > (< / span > record_id < span class = "op" > =< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/c.html" class = "external-link" > c< / a > < / span > < span class = "op" > (< / span > < span class = "fl" > 1< / span > ,< span class = "fl" > 2< / span > ,< span class = "fl" > 1< / span > ,< span class = "fl" > 2< / span > < span class = "op" > )< / span > ,< / span > < / span >
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< span class = "r-in" > < span > redcap_event_name < span class = "op" > =< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/c.html" class = "external-link" > c< / a > < / span > < span class = "op" > (< / span > < span class = "st" > "baseline"< / span > , < span class = "st" > "baseline"< / span > , < span class = "st" > "followup"< / span > , < span class = "st" > "followup"< / span > < span class = "op" > )< / span > ,< / span > < / span >
< span class = "r-in" > < span > age < span class = "op" > =< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/c.html" class = "external-link" > c< / a > < / span > < span class = "op" > (< / span > < span class = "fl" > 25< / span > ,< span class = "fl" > 26< / span > ,< span class = "fl" > 27< / span > ,< span class = "fl" > 28< / span > < span class = "op" > )< / span > < span class = "op" > )< / span > ,< / span > < / span >
< span class = "r-in" > < span > < span class = "fu" > < a href = "https://rdrr.io/r/base/data.frame.html" class = "external-link" > data.frame< / a > < / span > < span class = "op" > (< / span > record_id < span class = "op" > =< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/c.html" class = "external-link" > c< / a > < / span > < span class = "op" > (< / span > < span class = "fl" > 1< / span > ,< span class = "fl" > 2< / span > < span class = "op" > )< / span > ,< / span > < / span >
< span class = "r-in" > < span > redcap_event_name < span class = "op" > =< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/c.html" class = "external-link" > c< / a > < / span > < span class = "op" > (< / span > < span class = "st" > "baseline"< / span > , < span class = "st" > "baseline"< / span > < span class = "op" > )< / span > ,< / span > < / span >
< span class = "r-in" > < span > gender < span class = "op" > =< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/c.html" class = "external-link" > c< / a > < / span > < span class = "op" > (< / span > < span class = "st" > "male"< / span > , < span class = "st" > "female"< / span > < span class = "op" > )< / span > < span class = "op" > )< / span > < span class = "op" > )< / span > < / span > < / span >
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< span class = "r-in" > < span > < span class = "fu" > redcap_wider< / span > < span class = "op" > (< / span > < span class = "va" > list1< / span > < span class = "op" > )< / span > < / span > < / span >
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< span class = "r-msg co" > < span class = "r-pr" > #> < / span > Joining with `by = join_by(record_id)`< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > record_id age_baseline age_followup gender< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > 1 1 25 27 male< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > 2 2 26 28 female< / span >
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< span class = "r-in" > < span > < span class = "co" > # Simpel with two instruments< / span > < / span > < / span >
< span class = "r-in" > < span > < span class = "va" > list2< / span > < span class = "op" > < -< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/list.html" class = "external-link" > list< / a > < / span > < span class = "op" > (< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/data.frame.html" class = "external-link" > data.frame< / a > < / span > < span class = "op" > (< / span > record_id < span class = "op" > =< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/c.html" class = "external-link" > c< / a > < / span > < span class = "op" > (< / span > < span class = "fl" > 1< / span > ,< span class = "fl" > 2< / span > < span class = "op" > )< / span > ,< / span > < / span >
< span class = "r-in" > < span > age < span class = "op" > =< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/c.html" class = "external-link" > c< / a > < / span > < span class = "op" > (< / span > < span class = "fl" > 25< / span > ,< span class = "fl" > 26< / span > < span class = "op" > )< / span > < span class = "op" > )< / span > ,< / span > < / span >
< span class = "r-in" > < span > < span class = "fu" > < a href = "https://rdrr.io/r/base/data.frame.html" class = "external-link" > data.frame< / a > < / span > < span class = "op" > (< / span > record_id < span class = "op" > =< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/c.html" class = "external-link" > c< / a > < / span > < span class = "op" > (< / span > < span class = "fl" > 1< / span > ,< span class = "fl" > 2< / span > < span class = "op" > )< / span > ,< / span > < / span >
< span class = "r-in" > < span > gender < span class = "op" > =< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/c.html" class = "external-link" > c< / a > < / span > < span class = "op" > (< / span > < span class = "st" > "male"< / span > , < span class = "st" > "female"< / span > < span class = "op" > )< / span > < span class = "op" > )< / span > < span class = "op" > )< / span > < / span > < / span >
< span class = "r-in" > < span > < span class = "fu" > redcap_wider< / span > < span class = "op" > (< / span > < span class = "va" > list2< / span > < span class = "op" > )< / span > < / span > < / span >
< span class = "r-msg co" > < span class = "r-pr" > #> < / span > Joining with `by = join_by(record_id)`< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > record_id age gender< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > 1 1 25 male< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > 2 2 26 female< / span >
< span class = "r-in" > < span > < span class = "co" > # Simple with single instrument< / span > < / span > < / span >
< span class = "r-in" > < span > < span class = "va" > list3< / span > < span class = "op" > < -< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/list.html" class = "external-link" > list< / a > < / span > < span class = "op" > (< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/data.frame.html" class = "external-link" > data.frame< / a > < / span > < span class = "op" > (< / span > record_id < span class = "op" > =< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/c.html" class = "external-link" > c< / a > < / span > < span class = "op" > (< / span > < span class = "fl" > 1< / span > ,< span class = "fl" > 2< / span > < span class = "op" > )< / span > ,< / span > < / span >
< span class = "r-in" > < span > age < span class = "op" > =< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/c.html" class = "external-link" > c< / a > < / span > < span class = "op" > (< / span > < span class = "fl" > 25< / span > ,< span class = "fl" > 26< / span > < span class = "op" > )< / span > < span class = "op" > )< / span > < span class = "op" > )< / span > < / span > < / span >
< span class = "r-in" > < span > < span class = "fu" > redcap_wider< / span > < span class = "op" > (< / span > < span class = "va" > list3< / span > < span class = "op" > )< / span > < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > record_id age< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > 1 1 25< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > 2 2 26< / span >
< span class = "r-in" > < span > < span class = "co" > # Longitudinal with repeatable instruments< / span > < / span > < / span >
< span class = "r-in" > < span > < span class = "va" > list4< / span > < span class = "op" > < -< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/list.html" class = "external-link" > list< / a > < / span > < span class = "op" > (< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/data.frame.html" class = "external-link" > data.frame< / a > < / span > < span class = "op" > (< / span > record_id < span class = "op" > =< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/c.html" class = "external-link" > c< / a > < / span > < span class = "op" > (< / span > < span class = "fl" > 1< / span > ,< span class = "fl" > 2< / span > ,< span class = "fl" > 1< / span > ,< span class = "fl" > 2< / span > < span class = "op" > )< / span > ,< / span > < / span >
< span class = "r-in" > < span > redcap_event_name < span class = "op" > =< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/c.html" class = "external-link" > c< / a > < / span > < span class = "op" > (< / span > < span class = "st" > "baseline"< / span > , < span class = "st" > "baseline"< / span > , < span class = "st" > "followup"< / span > , < span class = "st" > "followup"< / span > < span class = "op" > )< / span > ,< / span > < / span >
< span class = "r-in" > < span > age < span class = "op" > =< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/c.html" class = "external-link" > c< / a > < / span > < span class = "op" > (< / span > < span class = "fl" > 25< / span > ,< span class = "fl" > 26< / span > ,< span class = "fl" > 27< / span > ,< span class = "fl" > 28< / span > < span class = "op" > )< / span > < span class = "op" > )< / span > ,< / span > < / span >
< span class = "r-in" > < span > < span class = "fu" > < a href = "https://rdrr.io/r/base/data.frame.html" class = "external-link" > data.frame< / a > < / span > < span class = "op" > (< / span > record_id < span class = "op" > =< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/c.html" class = "external-link" > c< / a > < / span > < span class = "op" > (< / span > < span class = "fl" > 1< / span > ,< span class = "fl" > 1< / span > ,< span class = "fl" > 1< / span > ,< span class = "fl" > 1< / span > ,< span class = "fl" > 2< / span > ,< span class = "fl" > 2< / span > ,< span class = "fl" > 2< / span > ,< span class = "fl" > 2< / span > < span class = "op" > )< / span > ,< / span > < / span >
< span class = "r-in" > < span > redcap_event_name < span class = "op" > =< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/c.html" class = "external-link" > c< / a > < / span > < span class = "op" > (< / span > < span class = "st" > "baseline"< / span > , < span class = "st" > "baseline"< / span > , < span class = "st" > "followup"< / span > , < span class = "st" > "followup"< / span > ,< / span > < / span >
< span class = "r-in" > < span > < span class = "st" > "baseline"< / span > , < span class = "st" > "baseline"< / span > , < span class = "st" > "followup"< / span > , < span class = "st" > "followup"< / span > < span class = "op" > )< / span > ,< / span > < / span >
< span class = "r-in" > < span > redcap_repeat_instrument < span class = "op" > =< / span > < span class = "st" > "walk"< / span > ,< / span > < / span >
< span class = "r-in" > < span > redcap_repeat_instance< span class = "op" > =< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/c.html" class = "external-link" > c< / a > < / span > < span class = "op" > (< / span > < span class = "fl" > 1< / span > ,< span class = "fl" > 2< / span > ,< span class = "fl" > 1< / span > ,< span class = "fl" > 2< / span > ,< span class = "fl" > 1< / span > ,< span class = "fl" > 2< / span > ,< span class = "fl" > 1< / span > ,< span class = "fl" > 2< / span > < span class = "op" > )< / span > ,< / span > < / span >
< span class = "r-in" > < span > dist < span class = "op" > =< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/c.html" class = "external-link" > c< / a > < / span > < span class = "op" > (< / span > < span class = "fl" > 40< / span > , < span class = "fl" > 32< / span > , < span class = "fl" > 25< / span > , < span class = "fl" > 33< / span > , < span class = "fl" > 28< / span > , < span class = "fl" > 24< / span > , < span class = "fl" > 23< / span > , < span class = "fl" > 36< / span > < span class = "op" > )< / span > < span class = "op" > )< / span > ,< / span > < / span >
< span class = "r-in" > < span > < span class = "fu" > < a href = "https://rdrr.io/r/base/data.frame.html" class = "external-link" > data.frame< / a > < / span > < span class = "op" > (< / span > record_id < span class = "op" > =< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/c.html" class = "external-link" > c< / a > < / span > < span class = "op" > (< / span > < span class = "fl" > 1< / span > ,< span class = "fl" > 2< / span > < span class = "op" > )< / span > ,< / span > < / span >
< span class = "r-in" > < span > redcap_event_name < span class = "op" > =< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/c.html" class = "external-link" > c< / a > < / span > < span class = "op" > (< / span > < span class = "st" > "baseline"< / span > , < span class = "st" > "baseline"< / span > < span class = "op" > )< / span > ,< / span > < / span >
< span class = "r-in" > < span > gender < span class = "op" > =< / span > < span class = "fu" > < a href = "https://rdrr.io/r/base/c.html" class = "external-link" > c< / a > < / span > < span class = "op" > (< / span > < span class = "st" > "male"< / span > , < span class = "st" > "female"< / span > < span class = "op" > )< / span > < span class = "op" > )< / span > < span class = "op" > )< / span > < / span > < / span >
< span class = "r-in" > < span > < span class = "fu" > redcap_wider< / span > < span class = "op" > (< / span > < span class = "va" > list4< / span > < span class = "op" > )< / span > < / span > < / span >
< span class = "r-msg co" > < span class = "r-pr" > #> < / span > Joining with `by = join_by(record_id)`< / span >
< span class = "r-msg co" > < span class = "r-pr" > #> < / span > Joining with `by = join_by(record_id)`< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > record_id age_baseline age_followup dist_1_baseline dist_1_followup< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > 1 1 25 27 40 25< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > 2 2 26 28 28 23< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > dist_2_baseline dist_2_followup gender< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > 1 32 33 male< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > 2 24 36 female< / span >
2023-06-30 10:56:53 +02:00
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< p > < / p > < p > Developed by Andreas Gammelgaard Damsbo, Paul Egeler.< / p >
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