mirror of
https://github.com/agdamsbo/REDCapCAST.git
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51 lines
1.8 KiB
R
51 lines
1.8 KiB
R
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#' Create zips file with necessary content based on data set
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#'
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#' @description
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#' Metadata can be added by editing the data dictionary of a project in the
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#' initial design phase. If you want to later add new instruments, this can be
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#' used to add instrument(s) to a project in production.
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#'
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#' @param data metadata for the relevant instrument.
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#' Could be from `ds2dd_detailed()`
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#' @param dir destination dir for the instrument zip. Default is the current WD.
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#' @param record.id flag to omit the first row of the data dictionary assuming
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#' this is the record_id field which should not be included in the instrument.
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#' Default is TRUE.
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#'
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#' @return list
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#' @export
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#'
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#' @examples
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#' data <- iris |>
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#' ds2dd_detailed(add.auto.id = TRUE,
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#' form.name=sample(c("b","c"),size = 6,replace = TRUE,prob=rep(.5,2))) |>
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#' purrr::pluck("meta")
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#' # data |> create_instrument_meta()
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#'
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#' data <- iris |>
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#' ds2dd_detailed(add.auto.id = FALSE) |>
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#' purrr::pluck("data")
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#' names(data) <- glue::glue("{sample(x = c('a','b'),size = length(names(data)),
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#' replace=TRUE,prob = rep(x=.5,2))}__{names(data)}")
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#' data <- data |> ds2dd_detailed(form.sep="__")
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#' # data |>
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#' # purrr::pluck("meta") |>
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#' # create_instrument_meta(record.id = FALSE)
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create_instrument_meta <- function(data,
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dir = here::here(""),
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record.id = TRUE) {
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if (record.id) {
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data <- data[-1,]
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}
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temp_dir <- tempdir()
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split(data,data$form_name) |> purrr::imap(function(.x,.i){
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utils::write.csv(.x, paste0(temp_dir, "/instrument.csv"), row.names = FALSE, na = "")
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writeLines("REDCapCAST", paste0(temp_dir, "/origin.txt"))
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zip::zip(paste0(dir, "/", .i, Sys.Date(), ".zip"),
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files = c("origin.txt", "instrument.csv"),
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root = temp_dir
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)
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})
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}
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